RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 TNS2Q63HR2 1409 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 LY75O60449 1722 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 AMPHP49418 695 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 RRS1Q15050 365 aaKnown RBP5.41□□□□□ -1.54
NUP85-209ENST00000578987 PELP1Q8IZL8 1130 aaKnown RBP5.41□□□□□ -1.54
NUP85-209ENST00000578987 COG3Q96JB2 828 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 ARXQ96QS3 562 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 TESK2Q96S53 571 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 GGNBP2Q9H3C7 697 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 MAP3K19Q56UN5 1328 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 TAF1LQ8IZX4 1826 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 KIF20BQ96Q89 1820 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 NINLQ9Y2I6 1382 aa5.41□□□□□ -1.54
NUP85-209ENST00000578987 FAM208AQ9UK61 1670 aaKnown RBP5.4□□□□□ -1.54
NUP85-209ENST00000578987 EDC4Q6P2E9 1401 aaKnown RBP5.4□□□□□ -1.54
NUP85-209ENST00000578987 QSER1Q2KHR3 1735 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 ABCC6O95255 1503 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 FYB1O15117 783 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 HOXC9P31274 260 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 NBPF6Q5VWK0 638 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 SMIM5Q71RC9 77 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 ZCRB1Q8TBF4 217 aaKnown RBP5.4□□□□□ -1.54
NUP85-209ENST00000578987 AKT1S1Q96B36 256 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 NBPF4Q96M43 638 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 SGIP1Q9BQI5 828 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 MTFR1LQ9H019 292 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 TFCP2L1Q9NZI6 479 aa5.4□□□□□ -1.54
NUP85-209ENST00000578987 PAPPAQ13219 1627 aa5.4□□□□□ -1.55
NUP85-209ENST00000578987 GPR162Q16538 588 aa5.39□□□□□ -1.55
NUP85-209ENST00000578987 HSP90AB2PQ58FF8 381 aa5.39□□□□□ -1.55
NUP85-209ENST00000578987 ZNF784Q8NCA9 323 aaPredicted RBP5.39□□□□□ -1.55
NUP85-209ENST00000578987 PNPLA7Q6ZV29 1317 aa5.39□□□□□ -1.55
NUP85-209ENST00000578987 COL24A1Q17RW2 1714 aa5.39□□□□□ -1.55
NUP85-209ENST00000578987 PPM1GO15355 546 aaPredicted RBP5.38□□□□□ -1.55
NUP85-209ENST00000578987 TRIM26Q12899 539 aaPredicted RBP5.38□□□□□ -1.55
NUP85-209ENST00000578987 MSL1Q68DK7 614 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 MPRIPQ6WCQ1 1025 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 COL23A1Q86Y22 540 aaPredicted RBP5.38□□□□□ -1.55
NUP85-209ENST00000578987 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 PUS7Q96PZ0 661 aaKnown RBP5.38□□□□□ -1.55
NUP85-209ENST00000578987 POLR3GLQ9BT43 218 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 CARD14Q9BXL6 1004 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 MEGF6O75095 1541 aa5.38□□□□□ -1.55
NUP85-209ENST00000578987 C5P01031 1676 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 TATP17735 454 aaPredicted RBP5.37□□□□□ -1.55
NUP85-209ENST00000578987 TMF1P82094 1093 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 SLC27A3Q5K4L6 730 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 RAPGEF4Q8WZA2 1011 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 CCNL1Q9UK58 526 aaPredicted RBP5.37□□□□□ -1.55
NUP85-209ENST00000578987 EMILIN1Q9Y6C2 1016 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 NSD2O96028 1365 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 ANKRD36BQ8N2N9 1353 aa5.37□□□□□ -1.55
NUP85-209ENST00000578987 POLD1P28340 1107 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 TNNT2P45379 298 aaPredicted RBP5.36□□□□□ -1.55
NUP85-209ENST00000578987 SLC16A10Q8TF71 515 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 CNKSR2Q8WXI2 1034 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 PCGF6Q9BYE7 350 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 WWC3Q9ULE0 1092 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 TOGARAM1Q9Y4F4 1720 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 VIRMAQ69YN4 1812 aaKnown RBP5.36□□□□□ -1.55
NUP85-209ENST00000578987 UBR3Q6ZT12 1888 aa5.36□□□□□ -1.55
NUP85-209ENST00000578987 UTRNP46939 3433 aa5.35□□□□□ -1.55
NUP85-209ENST00000578987 USP47Q96K76 1375 aa5.35□□□□□ -1.55
NUP85-209ENST00000578987 CYP27B1O15528 508 aa5.35□□□□□ -1.55
NUP85-209ENST00000578987 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
NUP85-209ENST00000578987 AMIGO3Q86WK7 504 aa5.35□□□□□ -1.55
NUP85-209ENST00000578987 N4BP2Q86UW6 1770 aaPredicted RBP5.34□□□□□ -1.55
NUP85-209ENST00000578987 INSRP06213 1382 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 SENP3-EIF4A1A0A087X0R7 540 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 PHF14O94880 888 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 C1QTNF8P60827 252 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 PIGBQ92521 554 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 EYA1Q99502 592 aa5.34□□□□□ -1.55
NUP85-209ENST00000578987 C4BP0C0L5 1744 aa5.34□□□□□ -1.56
NUP85-209ENST00000578987 PKD1L3Q7Z443 1732 aa5.34□□□□□ -1.56
NUP85-209ENST00000578987 SMG6Q86US8 1419 aaKnown RBP5.33□□□□□ -1.56
NUP85-209ENST00000578987 NSD3Q9BZ95 1437 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 MYH14Q7Z406 1995 aaKnown RBP5.33□□□□□ -1.56
NUP85-209ENST00000578987 PCDH11XQ9BZA7 1347 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 PCDH11YQ9BZA8 1340 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 VSIG10Q8N0Z9 540 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 ZNF526Q8TF50 670 aaPredicted RBP5.33□□□□□ -1.56
NUP85-209ENST00000578987 POLKQ9UBT6 870 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 ASAP1Q9ULH1 1129 aa5.33□□□□□ -1.56
NUP85-209ENST00000578987 CCDC88AQ3V6T2 1871 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 RTL1A6NKG5 1358 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 PALLDQ8WX93 1383 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 ANKRD26Q9UPS8 1709 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 CGNL1Q0VF96 1302 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 ATP6V1AP38606 617 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 ITPK1Q13572 414 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 LINC00116Q8NCU8 138 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 AK7Q96M32 723 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 SPG7Q9UQ90 795 aa5.32□□□□□ -1.56
NUP85-209ENST00000578987 FLT4P35916 1363 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 MAP3K5Q99683 1374 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 WASHC2AQ641Q2 1341 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.31□□□□□ -1.56
NUP85-209ENST00000578987 LOC102724428A0A0B4J2F2 783 aa5.31□□□□□ -1.56
NUP85-209ENST00000578987 GIGYF1O75420 1035 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms