RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 UPP2O95045 317 aa6.29□□□□□ -1.4
RHOT1-206ENST00000578205 HRCP23327 699 aa6.29□□□□□ -1.4
RHOT1-206ENST00000578205 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
RHOT1-206ENST00000578205 SPTLC1O15269 473 aa6.29□□□□□ -1.4
RHOT1-206ENST00000578205 BMP2P12643 396 aa6.29□□□□□ -1.4
RHOT1-206ENST00000578205 ZCCHC11Q5TAX3 1644 aaKnown RBP6.28□□□□□ -1.4
RHOT1-206ENST00000578205 MAGI3Q5TCQ9 1506 aa6.28□□□□□ -1.4
RHOT1-206ENST00000578205 CD109Q6YHK3 1445 aa6.28□□□□□ -1.4
RHOT1-206ENST00000578205 GRM5P41594 1212 aa6.28□□□□□ -1.4
RHOT1-206ENST00000578205 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
RHOT1-206ENST00000578205 PPFIA3O75145 1194 aa6.27□□□□□ -1.41
RHOT1-206ENST00000578205 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
RHOT1-206ENST00000578205 WDR7Q9Y4E6 1490 aa6.27□□□□□ -1.41
RHOT1-206ENST00000578205 UHRF1BP1LA0JNW5 1464 aa6.27□□□□□ -1.41
RHOT1-206ENST00000578205 PRPF38BQ5VTL8 546 aaKnown RBP6.27□□□□□ -1.41
RHOT1-206ENST00000578205 LRRIQ1Q96JM4 1722 aa6.27□□□□□ -1.41
RHOT1-206ENST00000578205 CCNB3Q8WWL7 1395 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 CSPP1Q1MSJ5 1256 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 RIC3Q7Z5B4 369 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 MEIOBQ8N635 442 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 CABLES1Q8TDN4 633 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 FYCO1Q9BQS8 1478 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 EFCAB2Q5VUJ9 269 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 PARP9Q8IXQ6 854 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 TSC1Q92574 1164 aa6.26□□□□□ -1.41
RHOT1-206ENST00000578205 PHLDB1Q86UU1 1377 aa6.25□□□□□ -1.41
RHOT1-206ENST00000578205 PER1O15534 1290 aaPredicted RBP6.25□□□□□ -1.41
RHOT1-206ENST00000578205 BRPF1P55201 1214 aaPredicted RBP6.25□□□□□ -1.41
RHOT1-206ENST00000578205 MLECQ14165 292 aa6.25□□□□□ -1.41
RHOT1-206ENST00000578205 TROQ12816 1431 aaPredicted RBP6.25□□□□□ -1.41
RHOT1-206ENST00000578205 ABCC10Q5T3U5 1492 aa6.25□□□□□ -1.41
RHOT1-206ENST00000578205 ARMC2Q8NEN0 867 aa6.25□□□□□ -1.41
RHOT1-206ENST00000578205 HECW1Q76N89 1606 aa6.25□□□□□ -1.41
RHOT1-206ENST00000578205 FSHRP23945 695 aa6.24□□□□□ -1.41
RHOT1-206ENST00000578205 KIF14Q15058 1648 aa6.24□□□□□ -1.41
RHOT1-206ENST00000578205 LRRC9Q6ZRR7 1453 aa6.24□□□□□ -1.41
RHOT1-206ENST00000578205 NEUROD2Q15784 382 aa6.24□□□□□ -1.41
RHOT1-206ENST00000578205 DNMT3LQ9UJW3 386 aa6.24□□□□□ -1.41
RHOT1-206ENST00000578205 SOS2Q07890 1332 aaPredicted RBP6.24□□□□□ -1.41
RHOT1-206ENST00000578205 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 RRP7BPQ9NSQ0 103 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 COL17A1Q9UMD9 1497 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NUTM2BA6NNL0 878 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NUTM2EB1AL46 878 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 KCNMA1Q12791 1236 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NUTM2DQ5VT03 806 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 VASH1Q7L8A9 365 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NUTM2AQ8IVF1 878 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 TSEN34Q9BSV6 310 aaKnown RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 PCGF6Q9BYE7 350 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 GPBP1L1Q9HC44 474 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 NCOA2Q15596 1464 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 MAP4K5Q9Y4K4 846 aa6.23□□□□□ -1.41
RHOT1-206ENST00000578205 ARID4BQ4LE39 1312 aaPredicted RBP6.23□□□□□ -1.41
RHOT1-206ENST00000578205 TIAM1Q13009 1591 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 SH3RF1Q7Z6J0 888 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 EMILIN1Q9Y6C2 1016 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 CCDC18Q5T9S5 1454 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.22□□□□□ -1.41
RHOT1-206ENST00000578205 TRIM66O15016 1216 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.22□□□□□ -1.41
RHOT1-206ENST00000578205 SCAPERQ9BY12 1400 aa6.22□□□□□ -1.41
RHOT1-206ENST00000578205 MAGEB6P1A0A0J9YX57 407 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 MAPKBP1O60336 1514 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 TTC37Q6PGP7 1564 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 ARHGAP5Q13017 1502 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 GPATCH8Q9UKJ3 1502 aaKnown RBP6.21□□□□□ -1.42
RHOT1-206ENST00000578205 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 QPCTQ16769 361 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 TRMT44Q8IYL2 757 aaKnown RBP6.21□□□□□ -1.42
RHOT1-206ENST00000578205 CCDC116Q8IYX3 515 aa6.21□□□□□ -1.42
RHOT1-206ENST00000578205 DIP2BQ9P265 1576 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 FANCAO15360 1455 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 TSPY4P0CV99 314 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 TSPY10P0CW01 314 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 KCTD17Q8N5Z5 321 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 LIMD1Q9UGP4 676 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 PLCH2O75038 1416 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 SH3BP5LQ7L8J4 393 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 HELBQ8NG08 1087 aaPredicted RBP6.2□□□□□ -1.42
RHOT1-206ENST00000578205 AK7Q96M32 723 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 KIF13AQ9H1H9 1805 aa6.2□□□□□ -1.42
RHOT1-206ENST00000578205 GSK3AP49840 483 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 SUZ12Q15022 739 aaKnown RBP6.19□□□□□ -1.42
RHOT1-206ENST00000578205 MYSM1Q5VVJ2 828 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 LILRB3O75022 631 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 KRT76Q01546 638 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 PTSQ03393 145 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 GGT6Q6P531 493 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 GPR161Q8N6U8 529 aaKnown RBP6.19□□□□□ -1.42
RHOT1-206ENST00000578205 CARD14Q9BXL6 1004 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 TRAPPC8Q9Y2L5 1435 aa6.19□□□□□ -1.42
RHOT1-206ENST00000578205 TUSC1Q2TAM9 212 aa6.18□□□□□ -1.42
RHOT1-206ENST00000578205 TMEM151AQ8N4L1 468 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms