RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
SKA2-203ENST00000578105 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
SKA2-203ENST00000578105 AMOTL2Q9Y2J4 779 aa10.57□□□□□ -0.72
SKA2-203ENST00000578105 ACEP12821 1306 aa10.57□□□□□ -0.72
SKA2-203ENST00000578105 PRKAR2BP31323 418 aa10.56□□□□□ -0.72
SKA2-203ENST00000578105 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
SKA2-203ENST00000578105 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
SKA2-203ENST00000578105 NME9Q86XW9 330 aa10.56□□□□□ -0.72
SKA2-203ENST00000578105 DZIP1LQ8IYY4 767 aaKnown RBP10.56□□□□□ -0.72
SKA2-203ENST00000578105 ARHGAP45Q92619 1136 aa10.56□□□□□ -0.72
SKA2-203ENST00000578105 RWDD1Q9H446 243 aaPredicted RBP10.56□□□□□ -0.72
SKA2-203ENST00000578105 DDX19BQ9UMR2 479 aa10.56□□□□□ -0.72
SKA2-203ENST00000578105 SETD1BQ9UPS6 1966 aaKnown RBP10.56□□□□□ -0.72
SKA2-203ENST00000578105 ARHGEF10O15013 1369 aa10.54□□□□□ -0.72
SKA2-203ENST00000578105 EXOSC9Q06265 439 aaKnown RBP10.54□□□□□ -0.72
SKA2-203ENST00000578105 ATF7IPQ6VMQ6 1270 aa10.54□□□□□ -0.72
SKA2-203ENST00000578105 FTSJ3Q8IY81 847 aaKnown RBP10.54□□□□□ -0.72
SKA2-203ENST00000578105 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
SKA2-203ENST00000578105 FMN2Q9NZ56 1722 aa10.54□□□□□ -0.72
SKA2-203ENST00000578105 NOP58Q9Y2X3 529 aaKnown RBP10.54□□□□□ -0.72
SKA2-203ENST00000578105 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 ANKLE2Q86XL3 938 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 FRAT1Q92837 279 aaPredicted RBP10.53□□□□□ -0.72
SKA2-203ENST00000578105 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
SKA2-203ENST00000578105 COG6Q9Y2V7 657 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
SKA2-203ENST00000578105 SBNO1A3KN83 1393 aa10.52□□□□□ -0.72
SKA2-203ENST00000578105 FLT4P35916 1363 aa10.52□□□□□ -0.72
SKA2-203ENST00000578105 CHD2O14647 1828 aaKnown RBP10.52□□□□□ -0.73
SKA2-203ENST00000578105 VIRMAQ69YN4 1812 aaKnown RBP10.52□□□□□ -0.73
SKA2-203ENST00000578105 PPM1GO15355 546 aaPredicted RBP10.52□□□□□ -0.73
SKA2-203ENST00000578105 CEBPAP49715 358 aaPredicted RBP10.52□□□□□ -0.73
SKA2-203ENST00000578105 HDAC1Q13547 482 aaPredicted RBP10.51□□□□□ -0.73
SKA2-203ENST00000578105 PANK1Q8TE04 598 aa10.51□□□□□ -0.73
SKA2-203ENST00000578105 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
SKA2-203ENST00000578105 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
SKA2-203ENST00000578105 SOS1Q07889 1333 aaPredicted RBP10.51□□□□□ -0.73
SKA2-203ENST00000578105 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
SKA2-203ENST00000578105 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
SKA2-203ENST00000578105 SSH1Q8WYL5 1049 aa10.5□□□□□ -0.73
SKA2-203ENST00000578105 KDRP35968 1356 aa10.5□□□□□ -0.73
SKA2-203ENST00000578105 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
SKA2-203ENST00000578105 DLG5Q8TDM6 1919 aa10.49□□□□□ -0.73
SKA2-203ENST00000578105 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
SKA2-203ENST00000578105 TRIM27P14373 513 aa10.49□□□□□ -0.73
SKA2-203ENST00000578105 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
SKA2-203ENST00000578105 NGDNQ8NEJ9 315 aaKnown RBP10.49□□□□□ -0.73
SKA2-203ENST00000578105 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
SKA2-203ENST00000578105 API5Q9BZZ5 524 aaKnown RBP10.48□□□□□ -0.73
SKA2-203ENST00000578105 BABAM1Q9NWV8 329 aa10.48□□□□□ -0.73
SKA2-203ENST00000578105 VAMP4O75379 141 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 IGHDP01880 384 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 HMOX1P09601 288 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 RLBP1P12271 317 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 RRS1Q15050 365 aaKnown RBP10.47□□□□□ -0.73
SKA2-203ENST00000578105 C8orf34Q49A92 452 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 GAS2L2Q8NHY3 880 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 PHACTR3Q96KR7 559 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 TMEM106CQ9BVX2 250 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 CHMP4AQ9BY43 222 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 NWD1Q149M9 1564 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 PEAK1Q9H792 1746 aa10.47□□□□□ -0.73
SKA2-203ENST00000578105 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
SKA2-203ENST00000578105 NOB1Q9ULX3 412 aaKnown RBP10.46□□□□□ -0.73
SKA2-203ENST00000578105 IGSF1Q8N6C5 1336 aa10.46□□□□□ -0.73
SKA2-203ENST00000578105 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.73
SKA2-203ENST00000578105 PHRF1Q9P1Y6 1649 aaKnown RBP10.46□□□□□ -0.74
SKA2-203ENST00000578105 CHL1O00533 1208 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 KCNA6P17658 529 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
SKA2-203ENST00000578105 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
SKA2-203ENST00000578105 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 MBIPQ9NS73 344 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 PCDHB15Q9Y5E8 787 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
SKA2-203ENST00000578105 NPHP4O75161 1426 aaPredicted RBP10.44□□□□□ -0.74
SKA2-203ENST00000578105 ABCC4O15439 1325 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 PTPRCP08575 1304 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 MAP3K19Q56UN5 1328 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 AMPHP49418 695 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 ITPRIPQ8IWB1 547 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 KCNH5Q8NCM2 988 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 GCC1Q96CN9 775 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 UPF2Q9HAU5 1272 aaKnown RBP10.44□□□□□ -0.74
SKA2-203ENST00000578105 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
SKA2-203ENST00000578105 RGPD8O14715 1765 aaPredicted RBP10.44□□□□□ -0.74
SKA2-203ENST00000578105 NCOA3Q9Y6Q9 1424 aa10.43□□□□□ -0.74
SKA2-203ENST00000578105 RGS3P49796 1198 aa10.43□□□□□ -0.74
SKA2-203ENST00000578105 MST1RQ04912 1400 aa10.42□□□□□ -0.74
SKA2-203ENST00000578105 PLEKHG2Q9H7P9 1386 aa10.42□□□□□ -0.74
SKA2-203ENST00000578105 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
SKA2-203ENST00000578105 KIF1AQ12756 1690 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms