RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MORC1Q86VD1 984 aa15.1■□□□□ 0.01
CDK5RAP3-204ENST00000577664 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
CDK5RAP3-204ENST00000577664 KCNH5Q8NCM2 988 aa15.1■□□□□ 0.01
CDK5RAP3-204ENST00000577664 PAPPAQ13219 1627 aa15.1■□□□□ 0.01
CDK5RAP3-204ENST00000577664 SLIT3O75094 1523 aa15.09■□□□□ 0.01
CDK5RAP3-204ENST00000577664 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDK5RAP3-204ENST00000577664 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
CDK5RAP3-204ENST00000577664 GCP02774 474 aa15.08■□□□□ 0
CDK5RAP3-204ENST00000577664 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-204ENST00000577664 CPDO75976 1380 aa15.07■□□□□ 0
CDK5RAP3-204ENST00000577664 INSRP06213 1382 aa15.07■□□□□ 0
CDK5RAP3-204ENST00000577664 KIF24Q5T7B8 1368 aa15.07■□□□□ 0
CDK5RAP3-204ENST00000577664 PPP2R1AP30153 589 aa15.06■□□□□ 0
CDK5RAP3-204ENST00000577664 ZC3H6P61129 1189 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-204ENST00000577664 JMYQ8N9B5 988 aa15.06■□□□□ 0
CDK5RAP3-204ENST00000577664 SLC16A10Q8TF71 515 aa15.06■□□□□ 0
CDK5RAP3-204ENST00000577664 MYBBP1AQ9BQG0 1328 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-204ENST00000577664 CCER2I3L3R5 266 aa15.05■□□□□ -0
CDK5RAP3-204ENST00000577664 KIF3CO14782 793 aa15.05■□□□□ -0
CDK5RAP3-204ENST00000577664 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
CDK5RAP3-204ENST00000577664 POLKQ9UBT6 870 aa15.05■□□□□ -0
CDK5RAP3-204ENST00000577664 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-204ENST00000577664 NFAT5O94916 1531 aa15.04■□□□□ -0
CDK5RAP3-204ENST00000577664 DDB1Q16531 1140 aa15.04■□□□□ -0
CDK5RAP3-204ENST00000577664 ARHGEF25Q86VW2 580 aa15.04■□□□□ -0
CDK5RAP3-204ENST00000577664 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-204ENST00000577664 CRB1P82279 1406 aa15.03■□□□□ -0
CDK5RAP3-204ENST00000577664 NUTM2GQ5VZR2 741 aa15.03■□□□□ -0
CDK5RAP3-204ENST00000577664 MIER1Q8N108 512 aa15.02■□□□□ -0
CDK5RAP3-204ENST00000577664 MARCH10Q8NA82 808 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-204ENST00000577664 QSER1Q2KHR3 1735 aa15.02□□□□□ -0.01
CDK5RAP3-204ENST00000577664 POLD1P28340 1107 aa15.01□□□□□ -0.01
CDK5RAP3-204ENST00000577664 MTHFSP49914 203 aa15.01□□□□□ -0.01
CDK5RAP3-204ENST00000577664 PCNTO95613 3336 aa15.01□□□□□ -0.01
CDK5RAP3-204ENST00000577664 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-204ENST00000577664 MAP3K19Q56UN5 1328 aa15□□□□□ -0.01
CDK5RAP3-204ENST00000577664 KLRG1Q96E93 195 aa15□□□□□ -0.01
CDK5RAP3-204ENST00000577664 WDR90Q96KV7 1748 aa15□□□□□ -0.01
CDK5RAP3-204ENST00000577664 ABCC6O95255 1503 aa14.99□□□□□ -0.01
CDK5RAP3-204ENST00000577664 FBLN1P23142 703 aa14.99□□□□□ -0.01
CDK5RAP3-204ENST00000577664 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
CDK5RAP3-204ENST00000577664 IP6K1Q92551 441 aa14.99□□□□□ -0.01
CDK5RAP3-204ENST00000577664 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
CDK5RAP3-204ENST00000577664 TNNT2P45379 298 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-204ENST00000577664 ZNF827Q17R98 1081 aa14.98□□□□□ -0.01
CDK5RAP3-204ENST00000577664 WNK3Q9BYP7 1800 aa14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 TOMM70O94826 608 aa14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 EMILIN1Q9Y6C2 1016 aa14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 FLT4P35916 1363 aa14.97□□□□□ -0.01
CDK5RAP3-204ENST00000577664 HOXC9P31274 260 aa14.96□□□□□ -0.01
CDK5RAP3-204ENST00000577664 CDCA7Q9BWT1 371 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-204ENST00000577664 COL18A1P39060 1754 aa14.96□□□□□ -0.02
CDK5RAP3-204ENST00000577664 CNGB1Q14028 1251 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-204ENST00000577664 NHSQ6T4R5 1651 aa14.95□□□□□ -0.02
CDK5RAP3-204ENST00000577664 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
CDK5RAP3-204ENST00000577664 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
CDK5RAP3-204ENST00000577664 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-204ENST00000577664 IL13P35225 146 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 AMPHP49418 695 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 HSP90AB2PQ58FF8 381 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 PNISRQ8TF01 805 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 LTN1O94822 1766 aa14.93□□□□□ -0.02
CDK5RAP3-204ENST00000577664 WWC3Q9ULE0 1092 aa14.92□□□□□ -0.02
CDK5RAP3-204ENST00000577664 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
CDK5RAP3-204ENST00000577664 SOX12O15370 315 aa14.91□□□□□ -0.02
CDK5RAP3-204ENST00000577664 DIAPH1O60610 1272 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-204ENST00000577664 LRRC4BQ9NT99 713 aa14.91□□□□□ -0.02
CDK5RAP3-204ENST00000577664 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-204ENST00000577664 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-204ENST00000577664 MRS2Q9HD23 443 aa14.89□□□□□ -0.03
CDK5RAP3-204ENST00000577664 NUDCQ9Y266 331 aa14.88□□□□□ -0.03
CDK5RAP3-204ENST00000577664 ERBB3P21860 1342 aa14.88□□□□□ -0.03
CDK5RAP3-204ENST00000577664 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
CDK5RAP3-204ENST00000577664 NCAPD2Q15021 1401 aa14.87□□□□□ -0.03
CDK5RAP3-204ENST00000577664 CD2APQ9Y5K6 639 aa14.87□□□□□ -0.03
CDK5RAP3-204ENST00000577664 WDR17Q8IZU2 1322 aa14.87□□□□□ -0.03
CDK5RAP3-204ENST00000577664 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
CDK5RAP3-204ENST00000577664 ANKRD24Q8TF21 1146 aa14.86□□□□□ -0.03
CDK5RAP3-204ENST00000577664 BTAF1O14981 1849 aa14.86□□□□□ -0.03
CDK5RAP3-204ENST00000577664 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
CDK5RAP3-204ENST00000577664 FCHSD2O94868 740 aa14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 SLC27A3Q5K4L6 730 aa14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 EYA1Q99502 592 aa14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 KDRP35968 1356 aa14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
CDK5RAP3-204ENST00000577664 TNS2Q63HR2 1409 aa14.84□□□□□ -0.03
CDK5RAP3-204ENST00000577664 EXOC5O00471 708 aa14.84□□□□□ -0.03
CDK5RAP3-204ENST00000577664 HTRA3P83110 453 aa14.84□□□□□ -0.03
CDK5RAP3-204ENST00000577664 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
CDK5RAP3-204ENST00000577664 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-204ENST00000577664 RGPD5Q99666 1765 aa14.83□□□□□ -0.03
CDK5RAP3-204ENST00000577664 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
CDK5RAP3-204ENST00000577664 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
CDK5RAP3-204ENST00000577664 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-204ENST00000577664 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms