RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-206ENST00000577645 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
NUP85-206ENST00000577645 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
NUP85-206ENST00000577645 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
NUP85-206ENST00000577645 LRP5O75197 1615 aa13.24□□□□□ -0.29
NUP85-206ENST00000577645 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
NUP85-206ENST00000577645 MORC1Q86VD1 984 aa13.23□□□□□ -0.29
NUP85-206ENST00000577645 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
NUP85-206ENST00000577645 LY75O60449 1722 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
NUP85-206ENST00000577645 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
NUP85-206ENST00000577645 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
NUP85-206ENST00000577645 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
NUP85-206ENST00000577645 ITGB4P16144 1822 aa13.21□□□□□ -0.29
NUP85-206ENST00000577645 PLSCR1O15162 318 aa13.21□□□□□ -0.29
NUP85-206ENST00000577645 TRIM37O94972 964 aa13.21□□□□□ -0.29
NUP85-206ENST00000577645 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
NUP85-206ENST00000577645 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
NUP85-206ENST00000577645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP85-206ENST00000577645 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
NUP85-206ENST00000577645 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
NUP85-206ENST00000577645 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
NUP85-206ENST00000577645 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
NUP85-206ENST00000577645 APBA3O96018 575 aa13.19□□□□□ -0.3
NUP85-206ENST00000577645 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
NUP85-206ENST00000577645 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
NUP85-206ENST00000577645 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
NUP85-206ENST00000577645 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
NUP85-206ENST00000577645 PPM1GO15355 546 aaPredicted RBP13.18□□□□□ -0.3
NUP85-206ENST00000577645 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
NUP85-206ENST00000577645 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
NUP85-206ENST00000577645 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
NUP85-206ENST00000577645 KDRP35968 1356 aa13.18□□□□□ -0.3
NUP85-206ENST00000577645 FBLN1P23142 703 aa13.17□□□□□ -0.3
NUP85-206ENST00000577645 CAMKK2Q96RR4 588 aa13.17□□□□□ -0.3
NUP85-206ENST00000577645 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
NUP85-206ENST00000577645 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
NUP85-206ENST00000577645 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
NUP85-206ENST00000577645 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
NUP85-206ENST00000577645 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
NUP85-206ENST00000577645 TAF1LQ8IZX4 1826 aa13.14□□□□□ -0.31
NUP85-206ENST00000577645 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
NUP85-206ENST00000577645 NBPF14Q5TI25 921 aa13.14□□□□□ -0.31
NUP85-206ENST00000577645 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
NUP85-206ENST00000577645 C5P01031 1676 aa13.14□□□□□ -0.31
NUP85-206ENST00000577645 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
NUP85-206ENST00000577645 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
NUP85-206ENST00000577645 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
NUP85-206ENST00000577645 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
NUP85-206ENST00000577645 EYA1Q99502 592 aa13.13□□□□□ -0.31
NUP85-206ENST00000577645 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
NUP85-206ENST00000577645 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
NUP85-206ENST00000577645 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
NUP85-206ENST00000577645 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
NUP85-206ENST00000577645 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
NUP85-206ENST00000577645 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
NUP85-206ENST00000577645 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
NUP85-206ENST00000577645 MTHFSP49914 203 aa13.1□□□□□ -0.31
NUP85-206ENST00000577645 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
NUP85-206ENST00000577645 CC2D1BQ5T0F9 858 aaKnown RBP13.1□□□□□ -0.31
NUP85-206ENST00000577645 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
NUP85-206ENST00000577645 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
NUP85-206ENST00000577645 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
NUP85-206ENST00000577645 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
NUP85-206ENST00000577645 IL13P35225 146 aa13.08□□□□□ -0.32
NUP85-206ENST00000577645 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
NUP85-206ENST00000577645 MRC1P22897 1456 aa13.08□□□□□ -0.32
NUP85-206ENST00000577645 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
NUP85-206ENST00000577645 CYP27B1O15528 508 aa13.07□□□□□ -0.32
NUP85-206ENST00000577645 TXNRD1Q16881 649 aa13.07□□□□□ -0.32
NUP85-206ENST00000577645 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
NUP85-206ENST00000577645 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
NUP85-206ENST00000577645 PHKG2P15735 406 aa13.06□□□□□ -0.32
NUP85-206ENST00000577645 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
NUP85-206ENST00000577645 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
NUP85-206ENST00000577645 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
NUP85-206ENST00000577645 KCNQ2O43526 872 aa13.05□□□□□ -0.32
NUP85-206ENST00000577645 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
NUP85-206ENST00000577645 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
NUP85-206ENST00000577645 STK32BQ9NY57 414 aa13.05□□□□□ -0.32
NUP85-206ENST00000577645 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
NUP85-206ENST00000577645 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
NUP85-206ENST00000577645 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
NUP85-206ENST00000577645 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
NUP85-206ENST00000577645 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
NUP85-206ENST00000577645 RALBP1Q15311 655 aa13.04□□□□□ -0.32
NUP85-206ENST00000577645 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
NUP85-206ENST00000577645 UBR2Q8IWV8 1755 aa13.03□□□□□ -0.32
NUP85-206ENST00000577645 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
NUP85-206ENST00000577645 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
NUP85-206ENST00000577645 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
NUP85-206ENST00000577645 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
NUP85-206ENST00000577645 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
NUP85-206ENST00000577645 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
NUP85-206ENST00000577645 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
NUP85-206ENST00000577645 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
NUP85-206ENST00000577645 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms