RNA–Protein interactions for RNA: ENST00000577250.1

RIOK3-202, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-202ENST00000577250 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
RIOK3-202ENST00000577250 MSH5O43196 834 aa13.35□□□□□ -0.27
RIOK3-202ENST00000577250 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
RIOK3-202ENST00000577250 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
RIOK3-202ENST00000577250 RTL1A6NKG5 1358 aa13.34□□□□□ -0.27
RIOK3-202ENST00000577250 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
RIOK3-202ENST00000577250 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
RIOK3-202ENST00000577250 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
RIOK3-202ENST00000577250 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
RIOK3-202ENST00000577250 MYOM1P52179 1685 aa13.34□□□□□ -0.27
RIOK3-202ENST00000577250 GPR162Q16538 588 aa13.33□□□□□ -0.28
RIOK3-202ENST00000577250 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
RIOK3-202ENST00000577250 CGNL1Q0VF96 1302 aa13.33□□□□□ -0.28
RIOK3-202ENST00000577250 BTAF1O14981 1849 aa13.32□□□□□ -0.28
RIOK3-202ENST00000577250 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-202ENST00000577250 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
RIOK3-202ENST00000577250 MEGF6O75095 1541 aa13.31□□□□□ -0.28
RIOK3-202ENST00000577250 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
RIOK3-202ENST00000577250 PNPLA7Q6ZV29 1317 aa13.31□□□□□ -0.28
RIOK3-202ENST00000577250 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
RIOK3-202ENST00000577250 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
RIOK3-202ENST00000577250 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
RIOK3-202ENST00000577250 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
RIOK3-202ENST00000577250 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
RIOK3-202ENST00000577250 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
RIOK3-202ENST00000577250 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
RIOK3-202ENST00000577250 INSRP06213 1382 aa13.29□□□□□ -0.28
RIOK3-202ENST00000577250 FLT4P35916 1363 aa13.29□□□□□ -0.28
RIOK3-202ENST00000577250 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
RIOK3-202ENST00000577250 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
RIOK3-202ENST00000577250 NSD2O96028 1365 aa13.28□□□□□ -0.28
RIOK3-202ENST00000577250 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
RIOK3-202ENST00000577250 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
RIOK3-202ENST00000577250 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
RIOK3-202ENST00000577250 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
RIOK3-202ENST00000577250 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
RIOK3-202ENST00000577250 NSD3Q9BZ95 1437 aa13.26□□□□□ -0.29
RIOK3-202ENST00000577250 MSL1Q68DK7 614 aa13.25□□□□□ -0.29
RIOK3-202ENST00000577250 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
RIOK3-202ENST00000577250 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
RIOK3-202ENST00000577250 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
RIOK3-202ENST00000577250 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
RIOK3-202ENST00000577250 CYP27B1O15528 508 aa13.24□□□□□ -0.29
RIOK3-202ENST00000577250 FLAD1Q8NFF5 587 aa13.24□□□□□ -0.29
RIOK3-202ENST00000577250 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
RIOK3-202ENST00000577250 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
RIOK3-202ENST00000577250 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
RIOK3-202ENST00000577250 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
RIOK3-202ENST00000577250 AK7Q96M32 723 aa13.23□□□□□ -0.29
RIOK3-202ENST00000577250 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
RIOK3-202ENST00000577250 GRIN3BO60391 1043 aa13.21□□□□□ -0.29
RIOK3-202ENST00000577250 PHF14O94880 888 aa13.21□□□□□ -0.29
RIOK3-202ENST00000577250 PIGBQ92521 554 aa13.21□□□□□ -0.29
RIOK3-202ENST00000577250 EYA1Q99502 592 aa13.21□□□□□ -0.29
RIOK3-202ENST00000577250 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
RIOK3-202ENST00000577250 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
RIOK3-202ENST00000577250 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
RIOK3-202ENST00000577250 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
RIOK3-202ENST00000577250 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
RIOK3-202ENST00000577250 LY75O60449 1722 aa13.19□□□□□ -0.3
RIOK3-202ENST00000577250 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
RIOK3-202ENST00000577250 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
RIOK3-202ENST00000577250 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
RIOK3-202ENST00000577250 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
RIOK3-202ENST00000577250 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.34e-14■□□□□ 10.8
RIOK3-202ENST00000577250 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
RIOK3-202ENST00000577250 QSER1Q2KHR3 1735 aa13.17□□□□□ -0.3
RIOK3-202ENST00000577250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
RIOK3-202ENST00000577250 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
RIOK3-202ENST00000577250 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-202ENST00000577250 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
RIOK3-202ENST00000577250 SIK1P57059 783 aa13.17□□□□□ -0.3
RIOK3-202ENST00000577250 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
RIOK3-202ENST00000577250 PHKG2P15735 406 aa13.16□□□□□ -0.3
RIOK3-202ENST00000577250 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
RIOK3-202ENST00000577250 EIF4A2Q14240 407 aaKnown RBP13.16□□□□□ -0.3
RIOK3-202ENST00000577250 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
RIOK3-202ENST00000577250 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
RIOK3-202ENST00000577250 UTRNP46939 3433 aa13.16□□□□□ -0.3
RIOK3-202ENST00000577250 GNPATO15228 680 aa13.15□□□□□ -0.3
RIOK3-202ENST00000577250 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
RIOK3-202ENST00000577250 SSFA2P28290 1259 aa13.15□□□□□ -0.3
RIOK3-202ENST00000577250 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
RIOK3-202ENST00000577250 PANK3Q9H999 370 aa13.15□□□□□ -0.3
RIOK3-202ENST00000577250 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 C5P01031 1676 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
RIOK3-202ENST00000577250 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
RIOK3-202ENST00000577250 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
RIOK3-202ENST00000577250 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
RIOK3-202ENST00000577250 WWC3Q9ULE0 1092 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
RIOK3-202ENST00000577250 CHD4Q14839 1912 aa13.12□□□□□ -0.31
RIOK3-202ENST00000577250 ITPK1Q13572 414 aa13.12□□□□□ -0.31
RIOK3-202ENST00000577250 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
RIOK3-202ENST00000577250 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
RIOK3-202ENST00000577250 CABP4P57796 275 aa13.11□□□□□ -0.31
RIOK3-202ENST00000577250 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms