RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 SNX21Q969T3 373 aa25.82■■□□□ 1.72
SRRM2-229ENST00000576894 THEMISQ8N1K5 641 aaPredicted RBP25.82■■□□□ 1.72
SRRM2-229ENST00000576894 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
SRRM2-229ENST00000576894 RIMS1Q86UR5 1692 aaKnown RBP25.81■■□□□ 1.72
SRRM2-229ENST00000576894 HSCBQ8IWL3 235 aa25.8■■□□□ 1.72
SRRM2-229ENST00000576894 ANKRD44Q8N8A2 993 aa25.8■■□□□ 1.72
SRRM2-229ENST00000576894 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
SRRM2-229ENST00000576894 XRN1Q8IZH2 1706 aaKnown RBP25.8■■□□□ 1.72
SRRM2-229ENST00000576894 MTHFSDQ2M296 383 aaKnown RBP25.8■■□□□ 1.72
SRRM2-229ENST00000576894 IGSF1Q8N6C5 1336 aa25.8■■□□□ 1.72
SRRM2-229ENST00000576894 CHMP5Q9NZZ3 219 aa25.79■■□□□ 1.72
SRRM2-229ENST00000576894 ANKARQ7Z5J8 1434 aa25.79■■□□□ 1.72
SRRM2-229ENST00000576894 RPAP2Q8IXW5 612 aaPredicted RBP25.79■■□□□ 1.72
SRRM2-229ENST00000576894 TBC1D9Q6ZT07 1266 aa25.78■■□□□ 1.72
SRRM2-229ENST00000576894 NCOA3Q9Y6Q9 1424 aa25.78■■□□□ 1.72
SRRM2-229ENST00000576894 PIK3C2AO00443 1686 aa25.78■■□□□ 1.72
SRRM2-229ENST00000576894 EYA1Q99502 592 aa25.76■■□□□ 1.71
SRRM2-229ENST00000576894 FOXO3O43524 673 aa25.76■■□□□ 1.71
SRRM2-229ENST00000576894 PLEKHM2Q8IWE5 1019 aa25.76■■□□□ 1.71
SRRM2-229ENST00000576894 SPRYD3Q8NCJ5 442 aa25.76■■□□□ 1.71
SRRM2-229ENST00000576894 RTF1Q92541 710 aaKnown RBP25.76■■□□□ 1.71
SRRM2-229ENST00000576894 RGPD8O14715 1765 aaPredicted RBP25.75■■□□□ 1.71
SRRM2-229ENST00000576894 AMPHP49418 695 aa25.75■■□□□ 1.71
SRRM2-229ENST00000576894 CEP85Q6P2H3 762 aa25.75■■□□□ 1.71
SRRM2-229ENST00000576894 GAS2L2Q8NHY3 880 aa25.75■■□□□ 1.71
SRRM2-229ENST00000576894 KIF2CQ99661 725 aa25.75■■□□□ 1.71
SRRM2-229ENST00000576894 FER1L4A9Z1Z3 1794 aa25.75■■□□□ 1.71
SRRM2-229ENST00000576894 CEP170BQ9Y4F5 1589 aaPredicted RBP25.75■■□□□ 1.71
SRRM2-229ENST00000576894 RTL1A6NKG5 1358 aa25.74■■□□□ 1.71
SRRM2-229ENST00000576894 MSH6P52701 1360 aa25.74■■□□□ 1.71
SRRM2-229ENST00000576894 HTATSF1O43719 755 aaKnown RBP25.73■■□□□ 1.71
SRRM2-229ENST00000576894 CDC45O75419 566 aa25.73■■□□□ 1.71
SRRM2-229ENST00000576894 SLC4A2P04920 1241 aa25.73■■□□□ 1.71
SRRM2-229ENST00000576894 DDIT3P35638 169 aa25.73■■□□□ 1.71
SRRM2-229ENST00000576894 TSPYL4Q9UJ04 414 aa25.73■■□□□ 1.71
SRRM2-229ENST00000576894 GSPT1P15170 499 aaKnown RBP25.72■■□□□ 1.71
SRRM2-229ENST00000576894 MIS18AQ9NYP9 233 aa25.72■■□□□ 1.71
SRRM2-229ENST00000576894 EIF5BO60841 1220 aaKnown RBP25.71■■□□□ 1.71
SRRM2-229ENST00000576894 MCM4P33991 863 aa25.71■■□□□ 1.71
SRRM2-229ENST00000576894 USP54Q70EL1 1684 aa25.71■■□□□ 1.71
SRRM2-229ENST00000576894 NLRP6P59044 892 aa25.7■■□□□ 1.7
SRRM2-229ENST00000576894 RTN4Q9NQC3 1192 aaKnown RBP25.7■■□□□ 1.7
SRRM2-229ENST00000576894 TTC22Q5TAA0 569 aa25.69■■□□□ 1.7
SRRM2-229ENST00000576894 MEIS3Q99687 375 aa25.69■■□□□ 1.7
SRRM2-229ENST00000576894 KCNA6P17658 529 aa25.69■■□□□ 1.7
SRRM2-229ENST00000576894 LRRC37A3O60309 1634 aa25.68■■□□□ 1.7
SRRM2-229ENST00000576894 HOXC9P31274 260 aa25.68■■□□□ 1.7
SRRM2-229ENST00000576894 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
SRRM2-229ENST00000576894 BRPF3Q9ULD4 1205 aa25.68■■□□□ 1.7
SRRM2-229ENST00000576894 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
SRRM2-229ENST00000576894 NWD1Q149M9 1564 aa25.67■■□□□ 1.7
SRRM2-229ENST00000576894 CCT4P50991 539 aaKnown RBP25.67■■□□□ 1.7
SRRM2-229ENST00000576894 G2E3Q7L622 706 aa25.67■■□□□ 1.7
SRRM2-229ENST00000576894 C16orf71Q8IYS4 520 aaPredicted RBP25.65■■□□□ 1.7
SRRM2-229ENST00000576894 CIZ1Q9ULV3 898 aaPredicted RBP25.65■■□□□ 1.7
SRRM2-229ENST00000576894 GNAT3A8MTJ3 354 aa25.63■■□□□ 1.69
SRRM2-229ENST00000576894 SOS1Q07889 1333 aaPredicted RBP25.62■■□□□ 1.69
SRRM2-229ENST00000576894 HMMRO75330 724 aa25.62■■□□□ 1.69
SRRM2-229ENST00000576894 HSP90AB1P08238 724 aaKnown RBP25.62■■□□□ 1.69
SRRM2-229ENST00000576894 BABAM1Q9NWV8 329 aa25.61■■□□□ 1.69
SRRM2-229ENST00000576894 OTUD7AQ8TE49 926 aaPredicted RBP25.61■■□□□ 1.69
SRRM2-229ENST00000576894 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
SRRM2-229ENST00000576894 STK31Q9BXU1 1019 aa25.6■■□□□ 1.69
SRRM2-229ENST00000576894 ANO8Q9HCE9 1232 aaPredicted RBP25.6■■□□□ 1.69
SRRM2-229ENST00000576894 F6X3S4 739 aa25.6■■□□□ 1.69
SRRM2-229ENST00000576894 ABTB2Q8N961 1025 aa25.6■■□□□ 1.69
SRRM2-229ENST00000576894 K7ELQ4 463 aaPredicted RBP25.59■■□□□ 1.69
SRRM2-229ENST00000576894 CD2BP2O95400 341 aaKnown RBP25.59■■□□□ 1.69
SRRM2-229ENST00000576894 MAP3K5Q99683 1374 aa25.59■■□□□ 1.69
SRRM2-229ENST00000576894 CCDC30Q5VVM6 783 aa25.59■■□□□ 1.69
SRRM2-229ENST00000576894 SMARCA5O60264 1052 aaPredicted RBP25.58■■□□□ 1.69
SRRM2-229ENST00000576894 SLC4A10Q6U841 1118 aa25.58■■□□□ 1.69
SRRM2-229ENST00000576894 IL17REQ8NFR9 667 aa25.57■■□□□ 1.68
SRRM2-229ENST00000576894 SDSP20132 328 aa25.57■■□□□ 1.68
SRRM2-229ENST00000576894 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
SRRM2-229ENST00000576894 DDX11L8A8MPP1 907 aa25.56■■□□□ 1.68
SRRM2-229ENST00000576894 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
SRRM2-229ENST00000576894 USP26Q9BXU7 913 aa25.56■■□□□ 1.68
SRRM2-229ENST00000576894 GNAI2P04899 355 aa25.56■■□□□ 1.68
SRRM2-229ENST00000576894 FLIIQ13045 1269 aa25.56■■□□□ 1.68
SRRM2-229ENST00000576894 L1TD1Q5T7N2 865 aaKnown RBP25.56■■□□□ 1.68
SRRM2-229ENST00000576894 OSBPL3Q9H4L5 887 aa25.56■■□□□ 1.68
SRRM2-229ENST00000576894 FAM208AQ9UK61 1670 aaKnown RBP25.56■■□□□ 1.68
SRRM2-229ENST00000576894 RAB3GAP1Q15042 981 aa25.55■■□□□ 1.68
SRRM2-229ENST00000576894 TAF7Q15545 349 aaPredicted RBP25.55■■□□□ 1.68
SRRM2-229ENST00000576894 PHF8Q9UPP1 1060 aa25.55■■□□□ 1.68
SRRM2-229ENST00000576894 TRAK2O60296 914 aa25.54■■□□□ 1.68
SRRM2-229ENST00000576894 RABEP1Q15276 862 aa25.54■■□□□ 1.68
SRRM2-229ENST00000576894 LTV1Q96GA3 475 aaPredicted RBP25.53■■□□□ 1.68
SRRM2-229ENST00000576894 GNAI3P08754 354 aa25.52■■□□□ 1.68
SRRM2-229ENST00000576894 CASC1Q6TDU7 716 aa25.52■■□□□ 1.68
SRRM2-229ENST00000576894 TNPO1Q92973 898 aaKnown RBP25.52■■□□□ 1.68
SRRM2-229ENST00000576894 APBB1O00213 710 aa25.52■■□□□ 1.68
SRRM2-229ENST00000576894 C14orf37Q86TY3 774 aa25.51■■□□□ 1.67
SRRM2-229ENST00000576894 FKBP5Q13451 457 aaPredicted RBP25.51■■□□□ 1.67
SRRM2-229ENST00000576894 IP6K1Q92551 441 aa25.51■■□□□ 1.67
SRRM2-229ENST00000576894 CHD2O14647 1828 aaKnown RBP25.5■■□□□ 1.67
SRRM2-229ENST00000576894 FSD2A1L4K1 749 aa25.5■■□□□ 1.67
SRRM2-229ENST00000576894 PXDNLA1KZ92 1463 aa25.5■■□□□ 1.67
SRRM2-229ENST00000576894 PDE1AP54750 535 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms