RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SLC52A1Q9NWF4 448 aa21.34■■□□□ 1.01
ATPAF1-214ENST00000576409 FAM177BA6PVY3 158 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 TTLL5Q6EMB2 1281 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 PDCL3Q9H2J4 239 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 NLRP2Q9NX02 1062 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 ATAD2Q6PL18 1390 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 ANXA1P04083 346 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1.01
ATPAF1-214ENST00000576409 TCEANC2Q96MN5 208 aa21.33■■□□□ 1
ATPAF1-214ENST00000576409 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1
ATPAF1-214ENST00000576409 GRIN2AQ12879 1464 aa21.33■■□□□ 1
ATPAF1-214ENST00000576409 ME1P48163 572 aa21.32■■□□□ 1
ATPAF1-214ENST00000576409 BLOC1S2Q6QNY1 142 aa21.32■■□□□ 1
ATPAF1-214ENST00000576409 TTC12Q9H892 705 aaPredicted RBP21.32■■□□□ 1
ATPAF1-214ENST00000576409 MYL6BP14649 208 aa21.32■■□□□ 1
ATPAF1-214ENST00000576409 SPATA32Q96LK8 384 aa21.32■■□□□ 1
ATPAF1-214ENST00000576409 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
ATPAF1-214ENST00000576409 LETM1O95202 739 aaPredicted RBP21.32■■□□□ 1
ATPAF1-214ENST00000576409 NUP62CLQ9H1M0 184 aa21.32■■□□□ 1
ATPAF1-214ENST00000576409 ASXL1Q8IXJ9 1541 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 SPDYE4A6NLX3 237 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 TPM3P06753 285 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 CCDC112Q8NEF3 446 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 PDE4CQ08493 712 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 RAB3GAP1Q15042 981 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 CHAMP1Q96JM3 812 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
ATPAF1-214ENST00000576409 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
ATPAF1-214ENST00000576409 OSCARQ8IYS5 282 aa21.3■■□□□ 1
ATPAF1-214ENST00000576409 ADCY5O95622 1261 aa21.3■■□□□ 1
ATPAF1-214ENST00000576409 NFXL1Q6ZNB6 911 aa21.3■■□□□ 1
ATPAF1-214ENST00000576409 BOLA2Q9H3K6 86 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 PDCL2Q8N4E4 241 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 CCDC34Q96HJ3 373 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 TRDNQ13061 729 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 TAF7Q15545 349 aaPredicted RBP21.29■■□□□ 1
ATPAF1-214ENST00000576409 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
ATPAF1-214ENST00000576409 ABCC11Q96J66 1382 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 SKIDA1Q1XH10 827 aa21.29■■□□□ 1
ATPAF1-214ENST00000576409 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
ATPAF1-214ENST00000576409 RALYLQ86SE5 291 aaKnown RBP21.28■■□□□ 1
ATPAF1-214ENST00000576409 GOLGA6L1Q8N7Z2 621 aa21.28■■□□□ 1
ATPAF1-214ENST00000576409 ATP10BO94823 1461 aa21.28■■□□□ 1
ATPAF1-214ENST00000576409 VAMP4O75379 141 aa21.28■■□□□ 1
ATPAF1-214ENST00000576409 CCDC8Q9H0W5 538 aaPredicted RBP21.28■■□□□ 1
ATPAF1-214ENST00000576409 TRIM29Q14134 588 aa21.27■■□□□ 1
ATPAF1-214ENST00000576409 GUCY1B3Q02153 619 aa21.27■■□□□ 1
ATPAF1-214ENST00000576409 ZNF530Q6P9A1 599 aaPredicted RBP21.27■■□□□ 1
ATPAF1-214ENST00000576409 SNX21Q969T3 373 aa21.27■■□□□ 1
ATPAF1-214ENST00000576409 RBM33Q96EV2 1170 aaKnown RBP21.27■■□□□ 1
ATPAF1-214ENST00000576409 IGSF3O75054 1194 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 KDM6BO15054 1643 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 STK38Q15208 465 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 MAP3K11Q16584 847 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 NECAB1Q8N987 351 aa21.26■□□□□ 0.99
ATPAF1-214ENST00000576409 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 HSP90AB2PQ58FF8 381 aa21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 MRPL50Q8N5N7 158 aaKnown RBP21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 TRMT1Q9NXH9 659 aaKnown RBP21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 FLIIQ13045 1269 aa21.25■□□□□ 0.99
ATPAF1-214ENST00000576409 ERICH4A6NGS2 130 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 AKAP17AQ02040 695 aaKnown RBP21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 CCDC183Q5T5S1 534 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 GAS2L3Q86XJ1 694 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 PLEKHM2Q8IWE5 1019 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 RBSNQ9H1K0 784 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 CNPY2Q9Y2B0 182 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 PDE1AP54750 535 aa21.24■□□□□ 0.99
ATPAF1-214ENST00000576409 LRSAM1Q6UWE0 723 aa21.23■□□□□ 0.99
ATPAF1-214ENST00000576409 FAM135AQ9P2D6 1515 aa21.23■□□□□ 0.99
ATPAF1-214ENST00000576409 KIF14Q15058 1648 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 USP48Q86UV5 1035 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 NCKAP5LQ9HCH0 1330 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 KIF1BPQ96EK5 621 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 NAT10Q9H0A0 1025 aaKnown RBP21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 LIMCH1Q9UPQ0 1083 aa21.22■□□□□ 0.99
ATPAF1-214ENST00000576409 STX6O43752 255 aa21.21■□□□□ 0.99
ATPAF1-214ENST00000576409 ZBTB7BO15156 539 aaPredicted RBP21.21■□□□□ 0.99
ATPAF1-214ENST00000576409 ESCO1Q5FWF5 840 aa21.21■□□□□ 0.99
ATPAF1-214ENST00000576409 PODXL2Q9NZ53 605 aa21.21■□□□□ 0.99
ATPAF1-214ENST00000576409 COL17A1Q9UMD9 1497 aaPredicted RBP21.21■□□□□ 0.99
ATPAF1-214ENST00000576409 JARID2Q92833 1246 aaPredicted RBP21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 CPA1P15085 419 aa21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 A2MP01023 1474 aa21.2■□□□□ 0.98
ATPAF1-214ENST00000576409 GJB2P29033 226 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 TRERF1Q96PN7 1200 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 ZKSCAN5Q9Y2L8 839 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms