RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 TUT1Q9H6E5 874 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-226ENST00000575461 ESPNB1AK53 854 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 M0R2N6 131 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 BAP1Q92560 729 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
CALCOCO2-226ENST00000575461 TLL1O43897 1013 aa13.07□□□□□ -0.32
CALCOCO2-226ENST00000575461 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
CALCOCO2-226ENST00000575461 PCDHB11Q9Y5F2 797 aa13.07□□□□□ -0.32
CALCOCO2-226ENST00000575461 C21orf2O43822 256 aa13.06□□□□□ -0.32
CALCOCO2-226ENST00000575461 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
CALCOCO2-226ENST00000575461 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-226ENST00000575461 ZNF211Q13398 564 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-226ENST00000575461 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
CALCOCO2-226ENST00000575461 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
CALCOCO2-226ENST00000575461 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
CALCOCO2-226ENST00000575461 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO2-226ENST00000575461 WEE1P30291 646 aa13.03□□□□□ -0.32
CALCOCO2-226ENST00000575461 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-226ENST00000575461 DCTN4Q9UJW0 460 aa13.03□□□□□ -0.32
CALCOCO2-226ENST00000575461 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 VAMP1P23763 118 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 MAPK1P28482 360 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 LINC01559Q495D7 138 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 C4orf48Q5BLP8 95 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 ASB16Q96NS5 453 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 MTRQ99707 1265 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
CALCOCO2-226ENST00000575461 COL26A1Q96A83 441 aa13.01□□□□□ -0.33
CALCOCO2-226ENST00000575461 BCL11AQ9H165 835 aa13.01□□□□□ -0.33
CALCOCO2-226ENST00000575461 USP35Q9P2H5 1018 aa13.01□□□□□ -0.33
CALCOCO2-226ENST00000575461 COL19A1Q14993 1142 aa13□□□□□ -0.33
CALCOCO2-226ENST00000575461 IL21Q9HBE4 155 aa12.99□□□□□ -0.33
CALCOCO2-226ENST00000575461 SEPT3Q9UH03 358 aa12.99□□□□□ -0.33
CALCOCO2-226ENST00000575461 DNMT3AQ9Y6K1 912 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO2-226ENST00000575461 TCF3P15923 654 aa12.98□□□□□ -0.33
CALCOCO2-226ENST00000575461 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
CALCOCO2-226ENST00000575461 TSEN2Q8NCE0 465 aaKnown RBP12.98□□□□□ -0.33
CALCOCO2-226ENST00000575461 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO2-226ENST00000575461 LHX8Q68G74 356 aa12.97□□□□□ -0.33
CALCOCO2-226ENST00000575461 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
CALCOCO2-226ENST00000575461 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
CALCOCO2-226ENST00000575461 ECM1Q16610 540 aa12.96□□□□□ -0.33
CALCOCO2-226ENST00000575461 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO2-226ENST00000575461 FOXO3O43524 673 aa12.95□□□□□ -0.34
CALCOCO2-226ENST00000575461 IGFBP4P22692 258 aa12.95□□□□□ -0.34
CALCOCO2-226ENST00000575461 ARHGAP4P98171 946 aa12.95□□□□□ -0.34
CALCOCO2-226ENST00000575461 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-226ENST00000575461 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-226ENST00000575461 LGR5O75473 907 aa12.94□□□□□ -0.34
CALCOCO2-226ENST00000575461 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
CALCOCO2-226ENST00000575461 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO2-226ENST00000575461 ZNF358Q9NW07 568 aa12.94□□□□□ -0.34
CALCOCO2-226ENST00000575461 SH3BP2P78314 561 aa12.93□□□□□ -0.34
CALCOCO2-226ENST00000575461 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
CALCOCO2-226ENST00000575461 RGL4Q8IZJ4 473 aa12.93□□□□□ -0.34
CALCOCO2-226ENST00000575461 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
CALCOCO2-226ENST00000575461 FAM13AO94988 1023 aa12.92□□□□□ -0.34
CALCOCO2-226ENST00000575461 BACH1O14867 736 aa12.91□□□□□ -0.34
CALCOCO2-226ENST00000575461 S1PR4O95977 384 aa12.91□□□□□ -0.34
CALCOCO2-226ENST00000575461 ZNF516Q92618 1163 aa12.91□□□□□ -0.34
CALCOCO2-226ENST00000575461 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
CALCOCO2-226ENST00000575461 NPR3P17342 541 aa12.9□□□□□ -0.34
CALCOCO2-226ENST00000575461 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
CALCOCO2-226ENST00000575461 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
CALCOCO2-226ENST00000575461 RAB15P59190 212 aa12.89□□□□□ -0.35
CALCOCO2-226ENST00000575461 MTMR3Q13615 1198 aa12.89□□□□□ -0.35
CALCOCO2-226ENST00000575461 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-226ENST00000575461 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
CALCOCO2-226ENST00000575461 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-226ENST00000575461 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-226ENST00000575461 VARSP26640 1264 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-226ENST00000575461 INTS6LQ5JSJ4 861 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-226ENST00000575461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.35
CALCOCO2-226ENST00000575461 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 RBCK1Q9BYM8 510 aa12.87□□□□□ -0.35
CALCOCO2-226ENST00000575461 ZBTB24O43167 697 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-226ENST00000575461 SCTRP47872 440 aa12.86□□□□□ -0.35
CALCOCO2-226ENST00000575461 NAA30Q147X3 362 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-226ENST00000575461 VASH1Q7L8A9 365 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-226ENST00000575461 SCG3Q8WXD2 468 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-226ENST00000575461 ATAD2Q6PL18 1390 aa12.84□□□□□ -0.35
CALCOCO2-226ENST00000575461 GDF10P55107 478 aa12.84□□□□□ -0.35
CALCOCO2-226ENST00000575461 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-226ENST00000575461 NDUFB5O43674 189 aa12.83□□□□□ -0.36
CALCOCO2-226ENST00000575461 CITED4Q96RK1 184 aa12.83□□□□□ -0.36
CALCOCO2-226ENST00000575461 RECKO95980 971 aa12.82□□□□□ -0.36
CALCOCO2-226ENST00000575461 SCNN1DP51172 638 aa12.82□□□□□ -0.36
CALCOCO2-226ENST00000575461 WNT7BP56706 349 aa12.82□□□□□ -0.36
CALCOCO2-226ENST00000575461 FGD1P98174 961 aa12.82□□□□□ -0.36
CALCOCO2-226ENST00000575461 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
CALCOCO2-226ENST00000575461 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms