RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
RFWD3-211ENST00000575397 POLD1P28340 1107 aa12.95□□□□□ -0.34
RFWD3-211ENST00000575397 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
RFWD3-211ENST00000575397 LTN1O94822 1766 aa12.94□□□□□ -0.34
RFWD3-211ENST00000575397 CEP350Q5VT06 3117 aa12.94□□□□□ -0.34
RFWD3-211ENST00000575397 NME9Q86XW9 330 aa12.94□□□□□ -0.34
RFWD3-211ENST00000575397 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
RFWD3-211ENST00000575397 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.346e-7■□□□□ 11
RFWD3-211ENST00000575397 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
RFWD3-211ENST00000575397 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 QSER1Q2KHR3 1735 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 USP47Q96K76 1375 aa12.93□□□□□ -0.34
RFWD3-211ENST00000575397 SYTL4Q96C24 671 aaPredicted RBP12.92□□□□□ -0.34
RFWD3-211ENST00000575397 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
RFWD3-211ENST00000575397 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
RFWD3-211ENST00000575397 KIF7Q2M1P5 1343 aa12.9□□□□□ -0.34
RFWD3-211ENST00000575397 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
RFWD3-211ENST00000575397 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
RFWD3-211ENST00000575397 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-211ENST00000575397 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
RFWD3-211ENST00000575397 DOT1LQ8TEK3 1739 aa12.9□□□□□ -0.34
RFWD3-211ENST00000575397 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
RFWD3-211ENST00000575397 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
RFWD3-211ENST00000575397 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
RFWD3-211ENST00000575397 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
RFWD3-211ENST00000575397 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
RFWD3-211ENST00000575397 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
RFWD3-211ENST00000575397 LY75O60449 1722 aa12.88□□□□□ -0.35
RFWD3-211ENST00000575397 NSD2O96028 1365 aa12.87□□□□□ -0.35
RFWD3-211ENST00000575397 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
RFWD3-211ENST00000575397 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-211ENST00000575397 TMC1Q8TDI8 760 aa12.87□□□□□ -0.35
RFWD3-211ENST00000575397 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
RFWD3-211ENST00000575397 ANKRD36BQ8N2N9 1353 aa12.86□□□□□ -0.35
RFWD3-211ENST00000575397 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
RFWD3-211ENST00000575397 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
RFWD3-211ENST00000575397 FBLN1P23142 703 aa12.84□□□□□ -0.35
RFWD3-211ENST00000575397 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFWD3-211ENST00000575397 IP6K1Q92551 441 aa12.84□□□□□ -0.35
RFWD3-211ENST00000575397 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
RFWD3-211ENST00000575397 WWC3Q9ULE0 1092 aa12.84□□□□□ -0.35
RFWD3-211ENST00000575397 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
RFWD3-211ENST00000575397 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.35
RFWD3-211ENST00000575397 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
RFWD3-211ENST00000575397 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
RFWD3-211ENST00000575397 MEGF6O75095 1541 aa12.83□□□□□ -0.36
RFWD3-211ENST00000575397 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
RFWD3-211ENST00000575397 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
RFWD3-211ENST00000575397 FKBP8Q14318 412 aa12.82□□□□□ -0.36
RFWD3-211ENST00000575397 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
RFWD3-211ENST00000575397 HSPA6P17066 643 aa12.81□□□□□ -0.36
RFWD3-211ENST00000575397 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
RFWD3-211ENST00000575397 ADCY9O60503 1353 aa12.81□□□□□ -0.36
RFWD3-211ENST00000575397 HOXC9P31274 260 aa12.8□□□□□ -0.36
RFWD3-211ENST00000575397 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
RFWD3-211ENST00000575397 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
RFWD3-211ENST00000575397 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
RFWD3-211ENST00000575397 C5P01031 1676 aa12.8□□□□□ -0.36
RFWD3-211ENST00000575397 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
RFWD3-211ENST00000575397 AMPHP49418 695 aa12.78□□□□□ -0.36
RFWD3-211ENST00000575397 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
RFWD3-211ENST00000575397 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
RFWD3-211ENST00000575397 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
RFWD3-211ENST00000575397 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
RFWD3-211ENST00000575397 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
RFWD3-211ENST00000575397 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.37
RFWD3-211ENST00000575397 PHF14O94880 888 aa12.76□□□□□ -0.37
RFWD3-211ENST00000575397 RALBP1Q15311 655 aa12.76□□□□□ -0.37
RFWD3-211ENST00000575397 COG3Q96JB2 828 aa12.76□□□□□ -0.37
RFWD3-211ENST00000575397 INSRP06213 1382 aa12.76□□□□□ -0.37
RFWD3-211ENST00000575397 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
RFWD3-211ENST00000575397 KIF3CO14782 793 aa12.75□□□□□ -0.37
RFWD3-211ENST00000575397 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
RFWD3-211ENST00000575397 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
RFWD3-211ENST00000575397 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
RFWD3-211ENST00000575397 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
RFWD3-211ENST00000575397 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
RFWD3-211ENST00000575397 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
RFWD3-211ENST00000575397 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
RFWD3-211ENST00000575397 AK7Q96M32 723 aa12.73□□□□□ -0.37
RFWD3-211ENST00000575397 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
RFWD3-211ENST00000575397 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
RFWD3-211ENST00000575397 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
RFWD3-211ENST00000575397 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
RFWD3-211ENST00000575397 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
RFWD3-211ENST00000575397 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
RFWD3-211ENST00000575397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
RFWD3-211ENST00000575397 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 UBR3Q6ZT12 1888 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 ST20-MTHFSA0A0A6YYL1 179 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 CYP27B1O15528 508 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
RFWD3-211ENST00000575397 CGNL1Q0VF96 1302 aa12.69□□□□□ -0.38
RFWD3-211ENST00000575397 HSP90AB2PQ58FF8 381 aa12.69□□□□□ -0.38
RFWD3-211ENST00000575397 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 683.7 ms