RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SBNO2Q9Y2G9 1366 aa17.37■□□□□ 0.37
PRPF8-208ENST00000573716 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
PRPF8-208ENST00000573716 LY75O60449 1722 aa17.36■□□□□ 0.37
PRPF8-208ENST00000573716 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
PRPF8-208ENST00000573716 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
PRPF8-208ENST00000573716 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
PRPF8-208ENST00000573716 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
PRPF8-208ENST00000573716 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
PRPF8-208ENST00000573716 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
PRPF8-208ENST00000573716 IP6K1Q92551 441 aa17.34■□□□□ 0.37
PRPF8-208ENST00000573716 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
PRPF8-208ENST00000573716 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
PRPF8-208ENST00000573716 EDC4Q6P2E9 1401 aaKnown RBP17.33■□□□□ 0.36
PRPF8-208ENST00000573716 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
PRPF8-208ENST00000573716 CEP350Q5VT06 3117 aa17.33■□□□□ 0.36
PRPF8-208ENST00000573716 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
PRPF8-208ENST00000573716 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
PRPF8-208ENST00000573716 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
PRPF8-208ENST00000573716 NSD2O96028 1365 aa17.31■□□□□ 0.36
PRPF8-208ENST00000573716 USP47Q96K76 1375 aa17.31■□□□□ 0.36
PRPF8-208ENST00000573716 AMPHP49418 695 aa17.3■□□□□ 0.36
PRPF8-208ENST00000573716 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
PRPF8-208ENST00000573716 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
PRPF8-208ENST00000573716 C5P01031 1676 aa17.29■□□□□ 0.36
PRPF8-208ENST00000573716 MEGF6O75095 1541 aa17.28■□□□□ 0.36
PRPF8-208ENST00000573716 FBLN1P23142 703 aa17.28■□□□□ 0.36
PRPF8-208ENST00000573716 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
PRPF8-208ENST00000573716 MAP3K19Q56UN5 1328 aa17.27■□□□□ 0.36
PRPF8-208ENST00000573716 HOXC9P31274 260 aa17.27■□□□□ 0.36
PRPF8-208ENST00000573716 COG3Q96JB2 828 aa17.27■□□□□ 0.36
PRPF8-208ENST00000573716 HSPA6P17066 643 aa17.26■□□□□ 0.35
PRPF8-208ENST00000573716 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
PRPF8-208ENST00000573716 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
PRPF8-208ENST00000573716 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
PRPF8-208ENST00000573716 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
PRPF8-208ENST00000573716 PHF14O94880 888 aa17.22■□□□□ 0.35
PRPF8-208ENST00000573716 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
PRPF8-208ENST00000573716 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
PRPF8-208ENST00000573716 ADCY9O60503 1353 aa17.21■□□□□ 0.35
PRPF8-208ENST00000573716 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
PRPF8-208ENST00000573716 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
PRPF8-208ENST00000573716 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
PRPF8-208ENST00000573716 AK7Q96M32 723 aa17.21■□□□□ 0.35
PRPF8-208ENST00000573716 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
PRPF8-208ENST00000573716 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.34
PRPF8-208ENST00000573716 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
PRPF8-208ENST00000573716 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
PRPF8-208ENST00000573716 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
PRPF8-208ENST00000573716 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
PRPF8-208ENST00000573716 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
PRPF8-208ENST00000573716 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
PRPF8-208ENST00000573716 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
PRPF8-208ENST00000573716 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
PRPF8-208ENST00000573716 HMGB2P26583 209 aaKnown RBP17.17■□□□□ 0.34
PRPF8-208ENST00000573716 ITGB4P16144 1822 aa17.17■□□□□ 0.34
PRPF8-208ENST00000573716 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
PRPF8-208ENST00000573716 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
PRPF8-208ENST00000573716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
PRPF8-208ENST00000573716 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
PRPF8-208ENST00000573716 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
PRPF8-208ENST00000573716 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
PRPF8-208ENST00000573716 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.33
PRPF8-208ENST00000573716 KIF3CO14782 793 aa17.13■□□□□ 0.33
PRPF8-208ENST00000573716 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
PRPF8-208ENST00000573716 CYP27B1O15528 508 aa17.12■□□□□ 0.33
PRPF8-208ENST00000573716 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
PRPF8-208ENST00000573716 ST20-MTHFSA0A0A6YYL1 179 aa17.1■□□□□ 0.33
PRPF8-208ENST00000573716 APLP1P51693 650 aa17.1■□□□□ 0.33
PRPF8-208ENST00000573716 PIGBQ92521 554 aa17.1■□□□□ 0.33
PRPF8-208ENST00000573716 FYB1O15117 783 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 GNPATO15228 680 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 SSFA2P28290 1259 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 INSRP06213 1382 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
PRPF8-208ENST00000573716 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
PRPF8-208ENST00000573716 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
PRPF8-208ENST00000573716 SIK1P57059 783 aa17.08■□□□□ 0.32
PRPF8-208ENST00000573716 TESK2Q96S53 571 aa17.08■□□□□ 0.32
PRPF8-208ENST00000573716 BCS1LQ9Y276 419 aa17.08■□□□□ 0.32
PRPF8-208ENST00000573716 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
PRPF8-208ENST00000573716 FLT4P35916 1363 aa17.07■□□□□ 0.32
PRPF8-208ENST00000573716 MMP10P09238 476 aa17.07■□□□□ 0.32
PRPF8-208ENST00000573716 MAP2P11137 1827 aaKnown RBP17.06■□□□□ 0.32
PRPF8-208ENST00000573716 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
PRPF8-208ENST00000573716 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
PRPF8-208ENST00000573716 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-208ENST00000573716 A0A0G2JLW4 131 aa17.05■□□□□ 0.32
PRPF8-208ENST00000573716 PPM1GO15355 546 aaPredicted RBP17.05■□□□□ 0.32
PRPF8-208ENST00000573716 TOMM70O94826 608 aa17.05■□□□□ 0.32
PRPF8-208ENST00000573716 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
PRPF8-208ENST00000573716 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
PRPF8-208ENST00000573716 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
PRPF8-208ENST00000573716 ITPK1Q13572 414 aa17.04■□□□□ 0.32
PRPF8-208ENST00000573716 NMRK2Q9NPI5 230 aa17.04■□□□□ 0.32
PRPF8-208ENST00000573716 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
PRPF8-208ENST00000573716 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
PRPF8-208ENST00000573716 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
PRPF8-208ENST00000573716 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms