RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 APAF1O14727 1248 aa17.5■□□□□ 0.39
RNF213-216ENST00000573548 CARD10Q9BWT7 1032 aa17.5■□□□□ 0.39
RNF213-216ENST00000573548 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
RNF213-216ENST00000573548 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
RNF213-216ENST00000573548 LMOD3Q0VAK6 560 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
RNF213-216ENST00000573548 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 KDRP35968 1356 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
RNF213-216ENST00000573548 SF3B2Q13435 895 aaKnown RBP17.48■□□□□ 0.39
RNF213-216ENST00000573548 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
RNF213-216ENST00000573548 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
RNF213-216ENST00000573548 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
RNF213-216ENST00000573548 COL18A1P39060 1754 aa17.47■□□□□ 0.39
RNF213-216ENST00000573548 CENPBP07199 599 aaPredicted RBP17.46■□□□□ 0.39
RNF213-216ENST00000573548 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
RNF213-216ENST00000573548 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
RNF213-216ENST00000573548 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
RNF213-216ENST00000573548 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.38
RNF213-216ENST00000573548 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
RNF213-216ENST00000573548 RIPK4P57078 832 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
RNF213-216ENST00000573548 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
RNF213-216ENST00000573548 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 THRAP3Q9Y2W1 955 aaKnown RBP17.45■□□□□ 0.38
RNF213-216ENST00000573548 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 CRB1P82279 1406 aa17.45■□□□□ 0.38
RNF213-216ENST00000573548 PDE3BQ13370 1112 aa17.44■□□□□ 0.38
RNF213-216ENST00000573548 CCDC27Q2M243 656 aa17.44■□□□□ 0.38
RNF213-216ENST00000573548 RTF1Q92541 710 aaKnown RBP17.44■□□□□ 0.38
RNF213-216ENST00000573548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.383e-9■■■□□ 15.1
RNF213-216ENST00000573548 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
RNF213-216ENST00000573548 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
RNF213-216ENST00000573548 IL2RBP14784 551 aa17.43■□□□□ 0.38
RNF213-216ENST00000573548 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
RNF213-216ENST00000573548 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
RNF213-216ENST00000573548 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
RNF213-216ENST00000573548 DEFB132Q7Z7B7 95 aa17.42■□□□□ 0.38
RNF213-216ENST00000573548 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
RNF213-216ENST00000573548 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
RNF213-216ENST00000573548 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
RNF213-216ENST00000573548 NCAPD2Q15021 1401 aa17.4■□□□□ 0.38
RNF213-216ENST00000573548 BAG6P46379 1132 aa17.4■□□□□ 0.38
RNF213-216ENST00000573548 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
RNF213-216ENST00000573548 DISP2A7MBM2 1401 aa17.39■□□□□ 0.38
RNF213-216ENST00000573548 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
RNF213-216ENST00000573548 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
RNF213-216ENST00000573548 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
RNF213-216ENST00000573548 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
RNF213-216ENST00000573548 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
RNF213-216ENST00000573548 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
RNF213-216ENST00000573548 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
RNF213-216ENST00000573548 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
RNF213-216ENST00000573548 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
RNF213-216ENST00000573548 EXOC5O00471 708 aa17.36■□□□□ 0.37
RNF213-216ENST00000573548 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
RNF213-216ENST00000573548 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
RNF213-216ENST00000573548 E9PSI1 815 aa17.35■□□□□ 0.37
RNF213-216ENST00000573548 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
RNF213-216ENST00000573548 RREB1Q92766 1687 aa17.35■□□□□ 0.37
RNF213-216ENST00000573548 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
RNF213-216ENST00000573548 IL16Q14005 1332 aa17.34■□□□□ 0.37
RNF213-216ENST00000573548 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
RNF213-216ENST00000573548 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
RNF213-216ENST00000573548 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
RNF213-216ENST00000573548 MAP3K5Q99683 1374 aa17.33■□□□□ 0.36
RNF213-216ENST00000573548 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
RNF213-216ENST00000573548 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
RNF213-216ENST00000573548 LRP5O75197 1615 aa17.32■□□□□ 0.36
RNF213-216ENST00000573548 TRIM37O94972 964 aa17.32■□□□□ 0.36
RNF213-216ENST00000573548 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
RNF213-216ENST00000573548 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
RNF213-216ENST00000573548 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
RNF213-216ENST00000573548 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
RNF213-216ENST00000573548 GNAI1P63096 354 aa17.31■□□□□ 0.36
RNF213-216ENST00000573548 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
RNF213-216ENST00000573548 DDB1Q16531 1140 aa17.31■□□□□ 0.36
RNF213-216ENST00000573548 SRCAPQ6ZRS2 3230 aa17.31■□□□□ 0.36
RNF213-216ENST00000573548 PHKG2P15735 406 aa17.3■□□□□ 0.36
RNF213-216ENST00000573548 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
RNF213-216ENST00000573548 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
RNF213-216ENST00000573548 TEFQ10587 303 aa17.29■□□□□ 0.36
RNF213-216ENST00000573548 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
RNF213-216ENST00000573548 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
RNF213-216ENST00000573548 MEGF6O75095 1541 aa17.29■□□□□ 0.36
RNF213-216ENST00000573548 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
RNF213-216ENST00000573548 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
RNF213-216ENST00000573548 MCM10Q7L590 875 aa17.28■□□□□ 0.36
RNF213-216ENST00000573548 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
RNF213-216ENST00000573548 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
RNF213-216ENST00000573548 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
RNF213-216ENST00000573548 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
RNF213-216ENST00000573548 CFAP44Q96MT7 982 aa17.27■□□□□ 0.36
RNF213-216ENST00000573548 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
RNF213-216ENST00000573548 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms