RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 RRS1Q15050 365 aaKnown RBP15.5■□□□□ 0.07
ABR-220ENST00000573325 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
ABR-220ENST00000573325 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
ABR-220ENST00000573325 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
ABR-220ENST00000573325 LY75O60449 1722 aa15.5■□□□□ 0.07
ABR-220ENST00000573325 QSER1Q2KHR3 1735 aa15.5■□□□□ 0.07
ABR-220ENST00000573325 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
ABR-220ENST00000573325 TUBGCP6Q96RT7 1819 aa15.48■□□□□ 0.07
ABR-220ENST00000573325 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
ABR-220ENST00000573325 ZCRB1Q8TBF4 217 aaKnown RBP15.48■□□□□ 0.07
ABR-220ENST00000573325 ARXQ96QS3 562 aa15.48■□□□□ 0.07
ABR-220ENST00000573325 INSRP06213 1382 aa15.48■□□□□ 0.07
ABR-220ENST00000573325 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
ABR-220ENST00000573325 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.07
ABR-220ENST00000573325 KIF24Q5T7B8 1368 aa15.46■□□□□ 0.07
ABR-220ENST00000573325 CYP27B1O15528 508 aa15.45■□□□□ 0.06
ABR-220ENST00000573325 AMPHP49418 695 aa15.45■□□□□ 0.06
ABR-220ENST00000573325 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
ABR-220ENST00000573325 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
ABR-220ENST00000573325 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
ABR-220ENST00000573325 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
ABR-220ENST00000573325 TMF1P82094 1093 aa15.44■□□□□ 0.06
ABR-220ENST00000573325 CEP350Q5VT06 3117 aa15.44■□□□□ 0.06
ABR-220ENST00000573325 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
ABR-220ENST00000573325 FLT4P35916 1363 aa15.42■□□□□ 0.06
ABR-220ENST00000573325 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
ABR-220ENST00000573325 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
ABR-220ENST00000573325 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
ABR-220ENST00000573325 TOGARAM1Q9Y4F4 1720 aa15.41■□□□□ 0.06
ABR-220ENST00000573325 KAT6BQ8WYB5 2073 aa15.41■□□□□ 0.06
ABR-220ENST00000573325 NKX1-1Q15270 411 aaPredicted RBP15.41■□□□□ 0.06
ABR-220ENST00000573325 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
ABR-220ENST00000573325 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
ABR-220ENST00000573325 NSD3Q9BZ95 1437 aa15.39■□□□□ 0.05
ABR-220ENST00000573325 PKD1L3Q7Z443 1732 aa15.39■□□□□ 0.05
ABR-220ENST00000573325 SYTL4Q96C24 671 aaPredicted RBP15.38■□□□□ 0.05
ABR-220ENST00000573325 CCNL1Q9UK58 526 aaPredicted RBP15.38■□□□□ 0.05
ABR-220ENST00000573325 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
ABR-220ENST00000573325 MAP2P11137 1827 aaKnown RBP15.38■□□□□ 0.05
ABR-220ENST00000573325 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
ABR-220ENST00000573325 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
ABR-220ENST00000573325 TIMELESSQ9UNS1 1208 aa15.37■□□□□ 0.05
ABR-220ENST00000573325 KIF20BQ96Q89 1820 aa15.37■□□□□ 0.05
ABR-220ENST00000573325 YBX3P16989 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
ABR-220ENST00000573325 RAPGEF4Q8WZA2 1011 aa15.36■□□□□ 0.05
ABR-220ENST00000573325 EYA1Q99502 592 aa15.36■□□□□ 0.05
ABR-220ENST00000573325 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
ABR-220ENST00000573325 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
ABR-220ENST00000573325 TATP17735 454 aaPredicted RBP15.35■□□□□ 0.05
ABR-220ENST00000573325 PIGBQ92521 554 aa15.35■□□□□ 0.05
ABR-220ENST00000573325 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
ABR-220ENST00000573325 TAF1LQ8IZX4 1826 aa15.34■□□□□ 0.05
ABR-220ENST00000573325 SMIM5Q71RC9 77 aa15.34■□□□□ 0.05
ABR-220ENST00000573325 CHD4Q14839 1912 aa15.34■□□□□ 0.05
ABR-220ENST00000573325 CDCA8Q53HL2 280 aa15.33■□□□□ 0.04
ABR-220ENST00000573325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.04
ABR-220ENST00000573325 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.04
ABR-220ENST00000573325 C5P01031 1676 aa15.32■□□□□ 0.04
ABR-220ENST00000573325 ITGB4P16144 1822 aa15.32■□□□□ 0.04
ABR-220ENST00000573325 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
ABR-220ENST00000573325 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
ABR-220ENST00000573325 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
ABR-220ENST00000573325 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
ABR-220ENST00000573325 POLD1P28340 1107 aa15.3■□□□□ 0.04
ABR-220ENST00000573325 ITPK1Q13572 414 aa15.3■□□□□ 0.04
ABR-220ENST00000573325 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
ABR-220ENST00000573325 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
ABR-220ENST00000573325 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 KDRP35968 1356 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
ABR-220ENST00000573325 PHKG2P15735 406 aa15.28■□□□□ 0.04
ABR-220ENST00000573325 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 SIK1P57059 783 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 C1QTNF8P60827 252 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 GPR162Q16538 588 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
ABR-220ENST00000573325 ADCY9O60503 1353 aa15.26■□□□□ 0.03
ABR-220ENST00000573325 SMARCC1Q92922 1105 aaPredicted RBP15.26■□□□□ 0.03
ABR-220ENST00000573325 KDM6AO15550 1401 aaPredicted RBP15.25■□□□□ 0.03
ABR-220ENST00000573325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.24■□□□□ 0.03
ABR-220ENST00000573325 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
ABR-220ENST00000573325 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
ABR-220ENST00000573325 HSPA5P11021 654 aaKnown RBP15.23■□□□□ 0.03
ABR-220ENST00000573325 SSFA2P28290 1259 aa15.23■□□□□ 0.03
ABR-220ENST00000573325 PPM1GO15355 546 aaPredicted RBP15.22■□□□□ 0.03
ABR-220ENST00000573325 IFNL2Q8IZJ0 200 aa15.22■□□□□ 0.03
ABR-220ENST00000573325 PANK3Q9H999 370 aa15.22■□□□□ 0.03
ABR-220ENST00000573325 KIAA1551Q9HCM1 1747 aa15.22■□□□□ 0.03
ABR-220ENST00000573325 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
ABR-220ENST00000573325 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
ABR-220ENST00000573325 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
ABR-220ENST00000573325 AEBP1Q8IUX7 1158 aa15.2■□□□□ 0.02
ABR-220ENST00000573325 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
ABR-220ENST00000573325 MSH5O43196 834 aa15.19■□□□□ 0.02
ABR-220ENST00000573325 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms