RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ANKLE1Q8NAG6 615 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 FOXJ1Q92949 421 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 UHRF1BP1LA0JNW5 1464 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 BCORL1Q5H9F3 1711 aa9.14□□□□□ -0.95
SF3B3-214ENST00000572365 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-214ENST00000572365 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
SF3B3-214ENST00000572365 SLFNL1Q499Z3 407 aa9.13□□□□□ -0.95
SF3B3-214ENST00000572365 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
SF3B3-214ENST00000572365 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
SF3B3-214ENST00000572365 MAGEB6P1A0A0J9YX57 407 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-214ENST00000572365 ATG7O95352 703 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 SKIP12755 728 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 GGCXP38435 758 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 PDE4CQ08493 712 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 ERFEQ4G0M1 354 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 CARD14Q9BXL6 1004 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
SF3B3-214ENST00000572365 DISP1Q96F81 1524 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 USP17L3A6NCW0 530 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 USP17L4A6NCW7 530 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 SH3BP2P78314 561 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 TRIM26Q12899 539 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-214ENST00000572365 KANK4Q5T7N3 995 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-214ENST00000572365 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 USP17L1Q7RTZ2 530 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 DZIP3Q86Y13 1208 aaKnown RBP9.11□□□□□ -0.95
SF3B3-214ENST00000572365 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 CARMIL1Q5VZK9 1371 aa9.11□□□□□ -0.95
SF3B3-214ENST00000572365 AGERQ15109 404 aa9.1□□□□□ -0.95
SF3B3-214ENST00000572365 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
SF3B3-214ENST00000572365 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
SF3B3-214ENST00000572365 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
SF3B3-214ENST00000572365 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
SF3B3-214ENST00000572365 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-214ENST00000572365 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-214ENST00000572365 TRIM32Q13049 653 aa9.09□□□□□ -0.95
SF3B3-214ENST00000572365 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
SF3B3-214ENST00000572365 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
SF3B3-214ENST00000572365 MAGI3Q5TCQ9 1506 aa9.09□□□□□ -0.95
SF3B3-214ENST00000572365 IQGAP2Q13576 1575 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 WNT7BP56706 349 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
SF3B3-214ENST00000572365 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
SF3B3-214ENST00000572365 RPIAP49247 311 aa9.07□□□□□ -0.96
SF3B3-214ENST00000572365 ELOAQ14241 798 aaKnown RBP9.07□□□□□ -0.96
SF3B3-214ENST00000572365 TRAF7Q6Q0C0 670 aa9.07□□□□□ -0.96
SF3B3-214ENST00000572365 SLC10A4Q96EP9 437 aa9.07□□□□□ -0.96
SF3B3-214ENST00000572365 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
SF3B3-214ENST00000572365 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
SF3B3-214ENST00000572365 NCOA4Q13772 614 aa9.06□□□□□ -0.96
SF3B3-214ENST00000572365 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
SF3B3-214ENST00000572365 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
SF3B3-214ENST00000572365 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
SF3B3-214ENST00000572365 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
SF3B3-214ENST00000572365 ESPNB1AK53 854 aa9.05□□□□□ -0.96
SF3B3-214ENST00000572365 GIGYF1O75420 1035 aaPredicted RBP9.05□□□□□ -0.96
SF3B3-214ENST00000572365 SKOR1P84550 965 aa9.05□□□□□ -0.96
SF3B3-214ENST00000572365 RNF20Q5VTR2 975 aa9.05□□□□□ -0.96
SF3B3-214ENST00000572365 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
SF3B3-214ENST00000572365 SIGLEC1Q9BZZ2 1709 aa9.05□□□□□ -0.96
SF3B3-214ENST00000572365 FAM196BA6NMK8 535 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 VARSP26640 1264 aaKnown RBP9.04□□□□□ -0.96
SF3B3-214ENST00000572365 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 SEPT12Q8IYM1 358 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
SF3B3-214ENST00000572365 KIF27Q86VH2 1401 aa9.04□□□□□ -0.96
SF3B3-214ENST00000572365 ZBTB7CA1YPR0 619 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 EML3Q32P44 896 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 MAP4K5Q9Y4K4 846 aa9.03□□□□□ -0.96
SF3B3-214ENST00000572365 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
SF3B3-214ENST00000572365 ZMIZ1Q9ULJ6 1067 aa9.02□□□□□ -0.97
SF3B3-214ENST00000572365 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
SF3B3-214ENST00000572365 PTK7Q13308 1070 aa9.01□□□□□ -0.97
SF3B3-214ENST00000572365 CRTC2Q53ET0 693 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-214ENST00000572365 KIAA0556O60303 1618 aa9.01□□□□□ -0.97
SF3B3-214ENST00000572365 FRMPD1Q5SYB0 1578 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L15C9J2P7 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L10C9JJH3 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L12C9JPN9 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L11C9JVI0 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L21D6R901 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L18D6R9N7 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L22D6RA61 530 aa9□□□□□ -0.97
SF3B3-214ENST00000572365 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms