RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 FBLN1P23142 703 aa14.17□□□□□ -0.14
PRPF8-203ENST00000571958 HOXC9P31274 260 aa14.17□□□□□ -0.14
PRPF8-203ENST00000571958 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
PRPF8-203ENST00000571958 PRIM1P49642 420 aaKnown RBP14.16□□□□□ -0.14
PRPF8-203ENST00000571958 COG3Q96JB2 828 aa14.16□□□□□ -0.14
PRPF8-203ENST00000571958 TESK2Q96S53 571 aa14.16□□□□□ -0.14
PRPF8-203ENST00000571958 AMPHP49418 695 aa14.15□□□□□ -0.14
PRPF8-203ENST00000571958 GPR162Q16538 588 aa14.15□□□□□ -0.14
PRPF8-203ENST00000571958 SLC16A10Q8TF71 515 aa14.15□□□□□ -0.14
PRPF8-203ENST00000571958 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
PRPF8-203ENST00000571958 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
PRPF8-203ENST00000571958 POLD1P28340 1107 aa14.14□□□□□ -0.15
PRPF8-203ENST00000571958 GOLGB1Q14789 3259 aaKnown RBP14.14□□□□□ -0.15
PRPF8-203ENST00000571958 C5P01031 1676 aa14.14□□□□□ -0.15
PRPF8-203ENST00000571958 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
PRPF8-203ENST00000571958 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
PRPF8-203ENST00000571958 ZCRB1Q8TBF4 217 aaKnown RBP14.13□□□□□ -0.15
PRPF8-203ENST00000571958 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
PRPF8-203ENST00000571958 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
PRPF8-203ENST00000571958 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
PRPF8-203ENST00000571958 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
PRPF8-203ENST00000571958 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
PRPF8-203ENST00000571958 USHBP1Q8N6Y0 703 aa14.11□□□□□ -0.15
PRPF8-203ENST00000571958 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
PRPF8-203ENST00000571958 CCNL1Q9UK58 526 aaPredicted RBP14.11□□□□□ -0.15
PRPF8-203ENST00000571958 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
PRPF8-203ENST00000571958 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
PRPF8-203ENST00000571958 C1QTNF8P60827 252 aa14.1□□□□□ -0.15
PRPF8-203ENST00000571958 USP47Q96K76 1375 aa14.09□□□□□ -0.15
PRPF8-203ENST00000571958 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
PRPF8-203ENST00000571958 ITGB4P16144 1822 aa14.09□□□□□ -0.15
PRPF8-203ENST00000571958 MSH5O43196 834 aa14.09□□□□□ -0.15
PRPF8-203ENST00000571958 GGNBP2Q9H3C7 697 aa14.09□□□□□ -0.15
PRPF8-203ENST00000571958 FYB1O15117 783 aa14.08□□□□□ -0.16
PRPF8-203ENST00000571958 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
PRPF8-203ENST00000571958 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
PRPF8-203ENST00000571958 RAPGEF4Q8WZA2 1011 aa14.07□□□□□ -0.16
PRPF8-203ENST00000571958 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
PRPF8-203ENST00000571958 PKD1L3Q7Z443 1732 aa14.07□□□□□ -0.16
PRPF8-203ENST00000571958 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
PRPF8-203ENST00000571958 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.167e-9■■■□□ 16.6
PRPF8-203ENST00000571958 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
PRPF8-203ENST00000571958 C4BP0C0L5 1744 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 INSRP06213 1382 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 FLT4P35916 1363 aa14.05□□□□□ -0.16
PRPF8-203ENST00000571958 UBR3Q6ZT12 1888 aa14.04□□□□□ -0.16
PRPF8-203ENST00000571958 GIGYF1O75420 1035 aaPredicted RBP14.04□□□□□ -0.16
PRPF8-203ENST00000571958 TMF1P82094 1093 aa14.04□□□□□ -0.16
PRPF8-203ENST00000571958 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
PRPF8-203ENST00000571958 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
PRPF8-203ENST00000571958 CYP27B1O15528 508 aa14.02□□□□□ -0.17
PRPF8-203ENST00000571958 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
PRPF8-203ENST00000571958 MAP2P11137 1827 aaKnown RBP14.01□□□□□ -0.17
PRPF8-203ENST00000571958 KIF24Q5T7B8 1368 aa14.01□□□□□ -0.17
PRPF8-203ENST00000571958 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
PRPF8-203ENST00000571958 AMIGO3Q86WK7 504 aa14□□□□□ -0.17
PRPF8-203ENST00000571958 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
PRPF8-203ENST00000571958 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
PRPF8-203ENST00000571958 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
PRPF8-203ENST00000571958 FLAD1Q8NFF5 587 aa13.99□□□□□ -0.17
PRPF8-203ENST00000571958 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
PRPF8-203ENST00000571958 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
PRPF8-203ENST00000571958 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
PRPF8-203ENST00000571958 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
PRPF8-203ENST00000571958 AK7Q96M32 723 aa13.98□□□□□ -0.17
PRPF8-203ENST00000571958 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-203ENST00000571958 PHF14O94880 888 aa13.97□□□□□ -0.17
PRPF8-203ENST00000571958 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
PRPF8-203ENST00000571958 PIGBQ92521 554 aa13.97□□□□□ -0.17
PRPF8-203ENST00000571958 SMARCC1Q92922 1105 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-203ENST00000571958 CEP350Q5VT06 3117 aa13.97□□□□□ -0.17
PRPF8-203ENST00000571958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
PRPF8-203ENST00000571958 HMGB2P26583 209 aaKnown RBP13.95□□□□□ -0.18
PRPF8-203ENST00000571958 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-203ENST00000571958 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
PRPF8-203ENST00000571958 ADCY9O60503 1353 aa13.95□□□□□ -0.18
PRPF8-203ENST00000571958 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
PRPF8-203ENST00000571958 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PRPF8-203ENST00000571958 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
PRPF8-203ENST00000571958 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
PRPF8-203ENST00000571958 SIK1P57059 783 aa13.93□□□□□ -0.18
PRPF8-203ENST00000571958 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
PRPF8-203ENST00000571958 WASHC2AQ641Q2 1341 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 SSFA2P28290 1259 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 ITPK1Q13572 414 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
PRPF8-203ENST00000571958 EYA1Q99502 592 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
PRPF8-203ENST00000571958 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 ASAP1Q9ULH1 1129 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
PRPF8-203ENST00000571958 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
PRPF8-203ENST00000571958 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
PRPF8-203ENST00000571958 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
PRPF8-203ENST00000571958 GNPATO15228 680 aa13.9□□□□□ -0.18
PRPF8-203ENST00000571958 PHKG2P15735 406 aa13.9□□□□□ -0.18
PRPF8-203ENST00000571958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms