RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-210ENST00000571120 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
ABR-210ENST00000571120 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
ABR-210ENST00000571120 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
ABR-210ENST00000571120 WASHC2AQ641Q2 1341 aa16.73■□□□□ 0.27
ABR-210ENST00000571120 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
ABR-210ENST00000571120 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
ABR-210ENST00000571120 PANK3Q9H999 370 aa16.73■□□□□ 0.27
ABR-210ENST00000571120 NSD2O96028 1365 aa16.73■□□□□ 0.27
ABR-210ENST00000571120 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
ABR-210ENST00000571120 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
ABR-210ENST00000571120 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
ABR-210ENST00000571120 UTRNP46939 3433 aa16.7■□□□□ 0.26
ABR-210ENST00000571120 KAT6BQ8WYB5 2073 aa16.7■□□□□ 0.26
ABR-210ENST00000571120 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
ABR-210ENST00000571120 LY75O60449 1722 aa16.69■□□□□ 0.26
ABR-210ENST00000571120 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
ABR-210ENST00000571120 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
ABR-210ENST00000571120 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
ABR-210ENST00000571120 PPM1GO15355 546 aaPredicted RBP16.67■□□□□ 0.26
ABR-210ENST00000571120 SLC15A2Q16348 729 aa16.67■□□□□ 0.26
ABR-210ENST00000571120 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
ABR-210ENST00000571120 LRRC4BQ9NT99 713 aa16.67■□□□□ 0.26
ABR-210ENST00000571120 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
ABR-210ENST00000571120 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
ABR-210ENST00000571120 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
ABR-210ENST00000571120 CYP27B1O15528 508 aa16.65■□□□□ 0.26
ABR-210ENST00000571120 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
ABR-210ENST00000571120 EYA1Q99502 592 aa16.65■□□□□ 0.26
ABR-210ENST00000571120 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
ABR-210ENST00000571120 QSER1Q2KHR3 1735 aa16.65■□□□□ 0.26
ABR-210ENST00000571120 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.26
ABR-210ENST00000571120 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
ABR-210ENST00000571120 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
ABR-210ENST00000571120 SPON1Q9HCB6 807 aa16.64■□□□□ 0.25
ABR-210ENST00000571120 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
ABR-210ENST00000571120 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
ABR-210ENST00000571120 ITGB4P16144 1822 aa16.62■□□□□ 0.25
ABR-210ENST00000571120 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
ABR-210ENST00000571120 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
ABR-210ENST00000571120 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
ABR-210ENST00000571120 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
ABR-210ENST00000571120 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
ABR-210ENST00000571120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
ABR-210ENST00000571120 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
ABR-210ENST00000571120 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
ABR-210ENST00000571120 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
ABR-210ENST00000571120 PTGER2P43116 358 aa16.6■□□□□ 0.25
ABR-210ENST00000571120 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
ABR-210ENST00000571120 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
ABR-210ENST00000571120 COL24A1Q17RW2 1714 aa16.59■□□□□ 0.25
ABR-210ENST00000571120 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
ABR-210ENST00000571120 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
ABR-210ENST00000571120 C5P01031 1676 aa16.57■□□□□ 0.24
ABR-210ENST00000571120 KCNQ4P56696 695 aa16.57■□□□□ 0.24
ABR-210ENST00000571120 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
ABR-210ENST00000571120 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
ABR-210ENST00000571120 KDRP35968 1356 aa16.55■□□□□ 0.24
ABR-210ENST00000571120 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
ABR-210ENST00000571120 PNPLA7Q6ZV29 1317 aa16.55■□□□□ 0.24
ABR-210ENST00000571120 PHKG2P15735 406 aa16.55■□□□□ 0.24
ABR-210ENST00000571120 CCNL1Q9UK58 526 aaPredicted RBP16.55■□□□□ 0.24
ABR-210ENST00000571120 NPC1L1Q9UHC9 1359 aa16.54■□□□□ 0.24
ABR-210ENST00000571120 MPRIPQ6WCQ1 1025 aa16.54■□□□□ 0.24
ABR-210ENST00000571120 PPP1R1BQ9UD71 204 aaPredicted RBP16.54■□□□□ 0.24
ABR-210ENST00000571120 IL13P35225 146 aa16.53■□□□□ 0.24
ABR-210ENST00000571120 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
ABR-210ENST00000571120 PIGBQ92521 554 aa16.53■□□□□ 0.24
ABR-210ENST00000571120 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
ABR-210ENST00000571120 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
ABR-210ENST00000571120 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
ABR-210ENST00000571120 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
ABR-210ENST00000571120 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
ABR-210ENST00000571120 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
ABR-210ENST00000571120 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
ABR-210ENST00000571120 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
ABR-210ENST00000571120 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
ABR-210ENST00000571120 MTHFSP49914 203 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
ABR-210ENST00000571120 SULT6B1Q6IMI4 303 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 ZNF831Q5JPB2 1677 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
ABR-210ENST00000571120 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
ABR-210ENST00000571120 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
ABR-210ENST00000571120 ERVV-2B6SEH9 535 aa16.46■□□□□ 0.23
ABR-210ENST00000571120 ARXQ96QS3 562 aa16.46■□□□□ 0.23
ABR-210ENST00000571120 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
ABR-210ENST00000571120 ASAP1Q9ULH1 1129 aa16.46■□□□□ 0.23
ABR-210ENST00000571120 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
ABR-210ENST00000571120 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
ABR-210ENST00000571120 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
ABR-210ENST00000571120 SIK1P57059 783 aa16.45■□□□□ 0.22
ABR-210ENST00000571120 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
ABR-210ENST00000571120 COL23A1Q86Y22 540 aaPredicted RBP16.45■□□□□ 0.22
ABR-210ENST00000571120 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
ABR-210ENST00000571120 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
ABR-210ENST00000571120 SCN11AQ9UI33 1791 aa16.44■□□□□ 0.22
ABR-210ENST00000571120 AMIGO3Q86WK7 504 aa16.44■□□□□ 0.22
ABR-210ENST00000571120 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms