RNA–Protein interactions for RNA: ENST00000571011.1

TRAP1-205, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-205ENST00000571011 PDGFDQ9GZP0 370 aaPredicted RBP29.46■■■□□ 2.31
TRAP1-205ENST00000571011 USHBP1Q8N6Y0 703 aa29.45■■■□□ 2.31
TRAP1-205ENST00000571011 RAPGEF4Q8WZA2 1011 aa29.45■■■□□ 2.31
TRAP1-205ENST00000571011 PPP1R1BQ9UD71 204 aaPredicted RBP29.45■■■□□ 2.31
TRAP1-205ENST00000571011 HSPA5P11021 654 aaKnown RBP29.44■■■□□ 2.3
TRAP1-205ENST00000571011 EMILIN1Q9Y6C2 1016 aa29.44■■■□□ 2.3
TRAP1-205ENST00000571011 PRIM1P49642 420 aaKnown RBP29.43■■■□□ 2.3
TRAP1-205ENST00000571011 POLR3GLQ9BT43 218 aa29.42■■■□□ 2.3
TRAP1-205ENST00000571011 TATP17735 454 aaPredicted RBP29.41■■■□□ 2.3
TRAP1-205ENST00000571011 SHANK3Q9BYB0 1731 aa29.41■■■□□ 2.3
TRAP1-205ENST00000571011 ZBTB7AO95365 584 aa29.4■■■□□ 2.3
TRAP1-205ENST00000571011 SLC27A3Q5K4L6 730 aa29.4■■■□□ 2.3
TRAP1-205ENST00000571011 LRRC4BQ9NT99 713 aa29.4■■■□□ 2.3
TRAP1-205ENST00000571011 PAPPAQ13219 1627 aa29.39■■■□□ 2.3
TRAP1-205ENST00000571011 SYTL4Q96C24 671 aaPredicted RBP29.39■■■□□ 2.3
TRAP1-205ENST00000571011 WASHC2AQ641Q2 1341 aa29.38■■■□□ 2.29
TRAP1-205ENST00000571011 PPM1GO15355 546 aaPredicted RBP29.36■■■□□ 2.29
TRAP1-205ENST00000571011 PTGER2P43116 358 aa29.36■■■□□ 2.29
TRAP1-205ENST00000571011 NSD2O96028 1365 aa29.36■■■□□ 2.29
TRAP1-205ENST00000571011 DOT1LQ8TEK3 1739 aa29.35■■■□□ 2.29
TRAP1-205ENST00000571011 MTFR1LQ9H019 292 aa29.34■■■□□ 2.29
TRAP1-205ENST00000571011 POLKQ9UBT6 870 aa29.34■■■□□ 2.29
TRAP1-205ENST00000571011 ATF5Q9Y2D1 282 aaPredicted RBP29.34■■■□□ 2.29
TRAP1-205ENST00000571011 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
TRAP1-205ENST00000571011 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
TRAP1-205ENST00000571011 ANKRD26Q9UPS8 1709 aa29.34■■■□□ 2.29
TRAP1-205ENST00000571011 ZNF827Q17R98 1081 aa29.33■■■□□ 2.29
TRAP1-205ENST00000571011 NCAPD2Q15021 1401 aa29.33■■■□□ 2.29
TRAP1-205ENST00000571011 MAP2P11137 1827 aaKnown RBP29.33■■■□□ 2.29
TRAP1-205ENST00000571011 AKT1S1Q96B36 256 aa29.32■■■□□ 2.28
TRAP1-205ENST00000571011 PANK3Q9H999 370 aa29.32■■■□□ 2.28
TRAP1-205ENST00000571011 CYP27B1O15528 508 aa29.28■■■□□ 2.28
TRAP1-205ENST00000571011 EYA1Q99502 592 aa29.28■■■□□ 2.28
TRAP1-205ENST00000571011 SGIP1Q9BQI5 828 aa29.28■■■□□ 2.28
TRAP1-205ENST00000571011 LY75O60449 1722 aa29.27■■■□□ 2.28
TRAP1-205ENST00000571011 TNNT2P45379 298 aaPredicted RBP29.25■■■□□ 2.27
TRAP1-205ENST00000571011 KCNQ4P56696 695 aa29.25■■■□□ 2.27
TRAP1-205ENST00000571011 SLC16A10Q8TF71 515 aa29.24■■■□□ 2.27
TRAP1-205ENST00000571011 CCNL1Q9UK58 526 aaPredicted RBP29.24■■■□□ 2.27
TRAP1-205ENST00000571011 DCAF8L1A6NGE4 600 aa29.23■■■□□ 2.27
TRAP1-205ENST00000571011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.23■■■□□ 2.27
TRAP1-205ENST00000571011 SPG7Q9UQ90 795 aa29.23■■■□□ 2.27
TRAP1-205ENST00000571011 PKD1L3Q7Z443 1732 aa29.23■■■□□ 2.27
TRAP1-205ENST00000571011 NKX1-1Q15270 411 aaPredicted RBP29.22■■■□□ 2.27
TRAP1-205ENST00000571011 TFCP2L1Q9NZI6 479 aa29.22■■■□□ 2.27
TRAP1-205ENST00000571011 QSER1Q2KHR3 1735 aa29.22■■■□□ 2.27
TRAP1-205ENST00000571011 EIF4A2Q14240 407 aaKnown RBP29.21■■■□□ 2.27
TRAP1-205ENST00000571011 PNPLA7Q6ZV29 1317 aa29.2■■■□□ 2.27
TRAP1-205ENST00000571011 HMGB2P26583 209 aaKnown RBP29.19■■■□□ 2.26
TRAP1-205ENST00000571011 MPRIPQ6WCQ1 1025 aa29.19■■■□□ 2.26
TRAP1-205ENST00000571011 ARXQ96QS3 562 aa29.18■■■□□ 2.26
TRAP1-205ENST00000571011 SYT17Q9BSW7 474 aa29.18■■■□□ 2.26
TRAP1-205ENST00000571011 FHDC1Q9C0D6 1143 aaPredicted RBP29.18■■■□□ 2.26
TRAP1-205ENST00000571011 UTRNP46939 3433 aa29.17■■■□□ 2.26
TRAP1-205ENST00000571011 PLEKHG2Q9H7P9 1386 aa29.16■■■□□ 2.26
TRAP1-205ENST00000571011 KNSTRNQ9Y448 316 aa29.16■■■□□ 2.26
TRAP1-205ENST00000571011 MORC1Q86VD1 984 aa29.15■■■□□ 2.26
TRAP1-205ENST00000571011 SMARCC1Q92922 1105 aaPredicted RBP29.15■■■□□ 2.26
TRAP1-205ENST00000571011 PALLDQ8WX93 1383 aa29.14■■■□□ 2.26
TRAP1-205ENST00000571011 TOGARAM1Q9Y4F4 1720 aa29.14■■■□□ 2.25
TRAP1-205ENST00000571011 IFNL2Q8IZJ0 200 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 PIGBQ92521 554 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 IGSF1Q8N6C5 1336 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 ITGB4P16144 1822 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 TUBGCP6Q96RT7 1819 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 MAP3K5Q99683 1374 aa29.13■■■□□ 2.25
TRAP1-205ENST00000571011 PHKG2P15735 406 aa29.11■■■□□ 2.25
TRAP1-205ENST00000571011 KIF7Q2M1P5 1343 aa29.11■■■□□ 2.25
TRAP1-205ENST00000571011 POLD1P28340 1107 aa29.1■■■□□ 2.25
TRAP1-205ENST00000571011 COL24A1Q17RW2 1714 aa29.09■■■□□ 2.25
TRAP1-205ENST00000571011 YY1P25490 414 aa29.09■■■□□ 2.25
TRAP1-205ENST00000571011 AMER1Q5JTC6 1135 aaPredicted RBP29.08■■■□□ 2.25
TRAP1-205ENST00000571011 COL23A1Q86Y22 540 aaPredicted RBP29.08■■■□□ 2.25
TRAP1-205ENST00000571011 C5P01031 1676 aa29.06■■■□□ 2.24
TRAP1-205ENST00000571011 TMOD3Q9NYL9 352 aa29.06■■■□□ 2.24
TRAP1-205ENST00000571011 FLAD1Q8NFF5 587 aa29.05■■■□□ 2.24
TRAP1-205ENST00000571011 TAF1LQ8IZX4 1826 aa29.04■■■□□ 2.24
TRAP1-205ENST00000571011 MSH5O43196 834 aa29.03■■■□□ 2.24
TRAP1-205ENST00000571011 PLEKHO1Q53GL0 409 aaPredicted RBP29.03■■■□□ 2.24
TRAP1-205ENST00000571011 LOC102724428A0A0B4J2F2 783 aa29.01■■■□□ 2.23
TRAP1-205ENST00000571011 HSP90AB1P08238 724 aaKnown RBP29.01■■■□□ 2.23
TRAP1-205ENST00000571011 SIK1P57059 783 aa29.01■■■□□ 2.23
TRAP1-205ENST00000571011 AMOTQ4VCS5 1084 aa29.01■■■□□ 2.23
TRAP1-205ENST00000571011 ASAP1Q9ULH1 1129 aa29.01■■■□□ 2.23
TRAP1-205ENST00000571011 ERVV-2B6SEH9 535 aa29■■■□□ 2.23
TRAP1-205ENST00000571011 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
TRAP1-205ENST00000571011 DCAF5Q96JK2 942 aa28.99■■■□□ 2.23
TRAP1-205ENST00000571011 GOLGB1Q14789 3259 aaKnown RBP28.99■■■□□ 2.23
TRAP1-205ENST00000571011 C4BP0C0L5 1744 aa28.98■■■□□ 2.23
TRAP1-205ENST00000571011 IL13P35225 146 aa28.98■■■□□ 2.23
TRAP1-205ENST00000571011 AEBP1Q8IUX7 1158 aa28.98■■■□□ 2.23
TRAP1-205ENST00000571011 AK7Q96M32 723 aa28.98■■■□□ 2.23
TRAP1-205ENST00000571011 ATG3Q9NT62 314 aa28.97■■■□□ 2.23
TRAP1-205ENST00000571011 ZNF530Q6P9A1 599 aaPredicted RBP28.96■■■□□ 2.23
TRAP1-205ENST00000571011 SULT6B1Q6IMI4 303 aa28.95■■■□□ 2.22
TRAP1-205ENST00000571011 KDRP35968 1356 aa28.95■■■□□ 2.22
TRAP1-205ENST00000571011 KLHL34Q8N239 644 aa28.94■■■□□ 2.22
TRAP1-205ENST00000571011 LINC00116Q8NCU8 138 aa28.94■■■□□ 2.22
TRAP1-205ENST00000571011 ATP6V1AP38606 617 aa28.93■■■□□ 2.22
TRAP1-205ENST00000571011 MSL1Q68DK7 614 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms