RNA–Protein interactions for RNA: ENST00000570215.1

KARS-212, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-212ENST00000570215 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
KARS-212ENST00000570215 PARD3Q8TEW0 1356 aa20.25■□□□□ 0.83
KARS-212ENST00000570215 PLSCR1O15162 318 aa20.25■□□□□ 0.83
KARS-212ENST00000570215 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
KARS-212ENST00000570215 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
KARS-212ENST00000570215 NHSQ6T4R5 1651 aa20.23■□□□□ 0.83
KARS-212ENST00000570215 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
KARS-212ENST00000570215 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
KARS-212ENST00000570215 SMG6Q86US8 1419 aaKnown RBP20.21■□□□□ 0.83
KARS-212ENST00000570215 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
KARS-212ENST00000570215 TXNRD1Q16881 649 aa20.2■□□□□ 0.82
KARS-212ENST00000570215 RGPD3A6NKT7 1758 aaPredicted RBP20.2■□□□□ 0.82
KARS-212ENST00000570215 RGPD4Q7Z3J3 1758 aa20.2■□□□□ 0.82
KARS-212ENST00000570215 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
KARS-212ENST00000570215 BTAF1O14981 1849 aa20.18■□□□□ 0.82
KARS-212ENST00000570215 RAPGEF4Q8WZA2 1011 aa20.18■□□□□ 0.82
KARS-212ENST00000570215 EYA1Q99502 592 aa20.18■□□□□ 0.82
KARS-212ENST00000570215 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
KARS-212ENST00000570215 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
KARS-212ENST00000570215 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
KARS-212ENST00000570215 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
KARS-212ENST00000570215 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
KARS-212ENST00000570215 PRIM1P49642 420 aaKnown RBP20.16■□□□□ 0.82
KARS-212ENST00000570215 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
KARS-212ENST00000570215 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
KARS-212ENST00000570215 KNSTRNQ9Y448 316 aa20.16■□□□□ 0.82
KARS-212ENST00000570215 AMER1Q5JTC6 1135 aaPredicted RBP20.15■□□□□ 0.82
KARS-212ENST00000570215 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
KARS-212ENST00000570215 LRP5O75197 1615 aa20.14■□□□□ 0.81
KARS-212ENST00000570215 PER1O15534 1290 aaPredicted RBP20.14■□□□□ 0.81
KARS-212ENST00000570215 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
KARS-212ENST00000570215 NSD2O96028 1365 aa20.13■□□□□ 0.81
KARS-212ENST00000570215 CYP27B1O15528 508 aa20.13■□□□□ 0.81
KARS-212ENST00000570215 LRRC4BQ9NT99 713 aa20.13■□□□□ 0.81
KARS-212ENST00000570215 KCNQ4P56696 695 aa20.12■□□□□ 0.81
KARS-212ENST00000570215 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
KARS-212ENST00000570215 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
KARS-212ENST00000570215 PKD1L3Q7Z443 1732 aa20.09■□□□□ 0.81
KARS-212ENST00000570215 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
KARS-212ENST00000570215 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
KARS-212ENST00000570215 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
KARS-212ENST00000570215 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
KARS-212ENST00000570215 ZNF827Q17R98 1081 aa20.07■□□□□ 0.8
KARS-212ENST00000570215 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
KARS-212ENST00000570215 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
KARS-212ENST00000570215 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
KARS-212ENST00000570215 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
KARS-212ENST00000570215 IGSF1Q8N6C5 1336 aa20.05■□□□□ 0.8
KARS-212ENST00000570215 AEBP1Q8IUX7 1158 aa20.05■□□□□ 0.8
KARS-212ENST00000570215 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
KARS-212ENST00000570215 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
KARS-212ENST00000570215 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
KARS-212ENST00000570215 LY75O60449 1722 aa20.02■□□□□ 0.8
KARS-212ENST00000570215 IL13P35225 146 aa20.02■□□□□ 0.8
KARS-212ENST00000570215 MTHFSP49914 203 aa20.02■□□□□ 0.8
KARS-212ENST00000570215 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
KARS-212ENST00000570215 ITGB4P16144 1822 aa20.02■□□□□ 0.79
KARS-212ENST00000570215 NKX1-1Q15270 411 aaPredicted RBP20.01■□□□□ 0.79
KARS-212ENST00000570215 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
KARS-212ENST00000570215 PHKG2P15735 406 aa20■□□□□ 0.79
KARS-212ENST00000570215 SPON1Q9HCB6 807 aa20■□□□□ 0.79
KARS-212ENST00000570215 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
KARS-212ENST00000570215 PIGBQ92521 554 aa19.99■□□□□ 0.79
KARS-212ENST00000570215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.793e-7■■■■□ 20.5
KARS-212ENST00000570215 SLC27A3Q5K4L6 730 aa19.98■□□□□ 0.79
KARS-212ENST00000570215 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
KARS-212ENST00000570215 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
KARS-212ENST00000570215 CCNL1Q9UK58 526 aaPredicted RBP19.98■□□□□ 0.79
KARS-212ENST00000570215 PTGER2P43116 358 aa19.96■□□□□ 0.79
KARS-212ENST00000570215 TUBGCP6Q96RT7 1819 aa19.96■□□□□ 0.79
KARS-212ENST00000570215 PALLDQ8WX93 1383 aa19.95■□□□□ 0.78
KARS-212ENST00000570215 HMOX1P09601 288 aa19.94■□□□□ 0.78
KARS-212ENST00000570215 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
KARS-212ENST00000570215 NPC1L1Q9UHC9 1359 aa19.94■□□□□ 0.78
KARS-212ENST00000570215 PLEKHO1Q53GL0 409 aaPredicted RBP19.93■□□□□ 0.78
KARS-212ENST00000570215 ZNF530Q6P9A1 599 aaPredicted RBP19.93■□□□□ 0.78
KARS-212ENST00000570215 PPP1R1BQ9UD71 204 aaPredicted RBP19.93■□□□□ 0.78
KARS-212ENST00000570215 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
KARS-212ENST00000570215 SMIM5Q71RC9 77 aa19.92■□□□□ 0.78
KARS-212ENST00000570215 TFCP2L1Q9NZI6 479 aa19.92■□□□□ 0.78
KARS-212ENST00000570215 KDRP35968 1356 aa19.92■□□□□ 0.78
KARS-212ENST00000570215 SGIP1Q9BQI5 828 aa19.91■□□□□ 0.78
KARS-212ENST00000570215 TMOD3Q9NYL9 352 aa19.91■□□□□ 0.78
KARS-212ENST00000570215 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
KARS-212ENST00000570215 COL3A1P02461 1466 aaPredicted RBP19.91■□□□□ 0.78
KARS-212ENST00000570215 DIAPH1O60610 1272 aaKnown RBP19.9■□□□□ 0.78
KARS-212ENST00000570215 AMIGO3Q86WK7 504 aa19.9■□□□□ 0.78
KARS-212ENST00000570215 MTFR1LQ9H019 292 aa19.9■□□□□ 0.78
KARS-212ENST00000570215 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
KARS-212ENST00000570215 C5P01031 1676 aa19.9■□□□□ 0.78
KARS-212ENST00000570215 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
KARS-212ENST00000570215 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
KARS-212ENST00000570215 AMOTQ4VCS5 1084 aa19.88■□□□□ 0.77
KARS-212ENST00000570215 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
KARS-212ENST00000570215 SMARCC1Q92922 1105 aaPredicted RBP19.87■□□□□ 0.77
KARS-212ENST00000570215 DCAF5Q96JK2 942 aa19.87■□□□□ 0.77
KARS-212ENST00000570215 PLEKHG2Q9H7P9 1386 aa19.86■□□□□ 0.77
KARS-212ENST00000570215 ITPK1Q13572 414 aa19.86■□□□□ 0.77
KARS-212ENST00000570215 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
KARS-212ENST00000570215 LOC102724428A0A0B4J2F2 783 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms