RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
SCAMP2-212ENST00000569904 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.35
SCAMP2-212ENST00000569904 FLT4P35916 1363 aa17.27■□□□□ 0.35
SCAMP2-212ENST00000569904 NSD2O96028 1365 aa17.26■□□□□ 0.35
SCAMP2-212ENST00000569904 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
SCAMP2-212ENST00000569904 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
SCAMP2-212ENST00000569904 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
SCAMP2-212ENST00000569904 PTGER2P43116 358 aa17.24■□□□□ 0.35
SCAMP2-212ENST00000569904 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-212ENST00000569904 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-212ENST00000569904 UTRNP46939 3433 aa17.23■□□□□ 0.35
SCAMP2-212ENST00000569904 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
SCAMP2-212ENST00000569904 LRRC4BQ9NT99 713 aa17.23■□□□□ 0.35
SCAMP2-212ENST00000569904 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
SCAMP2-212ENST00000569904 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
SCAMP2-212ENST00000569904 PPP1R1BQ9UD71 204 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-212ENST00000569904 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
SCAMP2-212ENST00000569904 MTFR1LQ9H019 292 aa17.21■□□□□ 0.35
SCAMP2-212ENST00000569904 ITGB4P16144 1822 aa17.21■□□□□ 0.35
SCAMP2-212ENST00000569904 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
SCAMP2-212ENST00000569904 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
SCAMP2-212ENST00000569904 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SCAMP2-212ENST00000569904 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
SCAMP2-212ENST00000569904 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
SCAMP2-212ENST00000569904 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
SCAMP2-212ENST00000569904 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
SCAMP2-212ENST00000569904 C5P01031 1676 aa17.18■□□□□ 0.34
SCAMP2-212ENST00000569904 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
SCAMP2-212ENST00000569904 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
SCAMP2-212ENST00000569904 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
SCAMP2-212ENST00000569904 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
SCAMP2-212ENST00000569904 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
SCAMP2-212ENST00000569904 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
SCAMP2-212ENST00000569904 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
SCAMP2-212ENST00000569904 PLEKHG2Q9H7P9 1386 aa17.16■□□□□ 0.34
SCAMP2-212ENST00000569904 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCAMP2-212ENST00000569904 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SCAMP2-212ENST00000569904 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
SCAMP2-212ENST00000569904 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
SCAMP2-212ENST00000569904 CYP27B1O15528 508 aa17.13■□□□□ 0.33
SCAMP2-212ENST00000569904 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
SCAMP2-212ENST00000569904 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
SCAMP2-212ENST00000569904 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
SCAMP2-212ENST00000569904 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
SCAMP2-212ENST00000569904 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
SCAMP2-212ENST00000569904 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
SCAMP2-212ENST00000569904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAMP2-212ENST00000569904 ARXQ96QS3 562 aa17.1■□□□□ 0.33
SCAMP2-212ENST00000569904 EYA1Q99502 592 aa17.1■□□□□ 0.33
SCAMP2-212ENST00000569904 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
SCAMP2-212ENST00000569904 CHD4Q14839 1912 aa17.09■□□□□ 0.33
SCAMP2-212ENST00000569904 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
SCAMP2-212ENST00000569904 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
SCAMP2-212ENST00000569904 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
SCAMP2-212ENST00000569904 KCNQ4P56696 695 aa17.08■□□□□ 0.32
SCAMP2-212ENST00000569904 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
SCAMP2-212ENST00000569904 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
SCAMP2-212ENST00000569904 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 YY1P25490 414 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 PANK3Q9H999 370 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 SPG7Q9UQ90 795 aa17.07■□□□□ 0.32
SCAMP2-212ENST00000569904 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SCAMP2-212ENST00000569904 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
SCAMP2-212ENST00000569904 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
SCAMP2-212ENST00000569904 SMARCC1Q92922 1105 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-212ENST00000569904 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
SCAMP2-212ENST00000569904 PHKG2P15735 406 aa17.03■□□□□ 0.32
SCAMP2-212ENST00000569904 PIGBQ92521 554 aa17.03■□□□□ 0.32
SCAMP2-212ENST00000569904 POLD1P28340 1107 aa17.02■□□□□ 0.32
SCAMP2-212ENST00000569904 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
SCAMP2-212ENST00000569904 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SCAMP2-212ENST00000569904 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
SCAMP2-212ENST00000569904 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
SCAMP2-212ENST00000569904 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
SCAMP2-212ENST00000569904 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
SCAMP2-212ENST00000569904 KDRP35968 1356 aa16.98■□□□□ 0.31
SCAMP2-212ENST00000569904 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
SCAMP2-212ENST00000569904 SIK1P57059 783 aa16.97■□□□□ 0.31
SCAMP2-212ENST00000569904 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
SCAMP2-212ENST00000569904 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
SCAMP2-212ENST00000569904 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
SCAMP2-212ENST00000569904 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
SCAMP2-212ENST00000569904 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
SCAMP2-212ENST00000569904 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
SCAMP2-212ENST00000569904 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
SCAMP2-212ENST00000569904 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 HSP90AB1P08238 724 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
SCAMP2-212ENST00000569904 SSFA2P28290 1259 aa16.94■□□□□ 0.3
SCAMP2-212ENST00000569904 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
SCAMP2-212ENST00000569904 AK7Q96M32 723 aa16.94■□□□□ 0.3
SCAMP2-212ENST00000569904 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
SCAMP2-212ENST00000569904 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms