RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZBTB7AO95365 584 aa19.33■□□□□ 0.68
GTF3C1-211ENST00000569653 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
GTF3C1-211ENST00000569653 TOGARAM1Q9Y4F4 1720 aa19.32■□□□□ 0.68
GTF3C1-211ENST00000569653 PTGER2P43116 358 aa19.32■□□□□ 0.68
GTF3C1-211ENST00000569653 ZNF827Q17R98 1081 aa19.32■□□□□ 0.68
GTF3C1-211ENST00000569653 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
GTF3C1-211ENST00000569653 INSRP06213 1382 aa19.32■□□□□ 0.68
GTF3C1-211ENST00000569653 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
GTF3C1-211ENST00000569653 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
GTF3C1-211ENST00000569653 FLT4P35916 1363 aa19.31■□□□□ 0.68
GTF3C1-211ENST00000569653 STK32BQ9NY57 414 aa19.3■□□□□ 0.68
GTF3C1-211ENST00000569653 PKD1L3Q7Z443 1732 aa19.3■□□□□ 0.68
GTF3C1-211ENST00000569653 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
GTF3C1-211ENST00000569653 KCNQ4P56696 695 aa19.29■□□□□ 0.68
GTF3C1-211ENST00000569653 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
GTF3C1-211ENST00000569653 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
GTF3C1-211ENST00000569653 SGIP1Q9BQI5 828 aa19.28■□□□□ 0.68
GTF3C1-211ENST00000569653 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
GTF3C1-211ENST00000569653 COL24A1Q17RW2 1714 aa19.28■□□□□ 0.68
GTF3C1-211ENST00000569653 KIF24Q5T7B8 1368 aa19.27■□□□□ 0.68
GTF3C1-211ENST00000569653 ITGB4P16144 1822 aa19.27■□□□□ 0.68
GTF3C1-211ENST00000569653 HSPA5P11021 654 aaKnown RBP19.26■□□□□ 0.67
GTF3C1-211ENST00000569653 SMG6Q86US8 1419 aaKnown RBP19.25■□□□□ 0.67
GTF3C1-211ENST00000569653 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
GTF3C1-211ENST00000569653 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
GTF3C1-211ENST00000569653 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
GTF3C1-211ENST00000569653 TAF1LQ8IZX4 1826 aa19.23■□□□□ 0.67
GTF3C1-211ENST00000569653 CYP27B1O15528 508 aa19.22■□□□□ 0.67
GTF3C1-211ENST00000569653 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
GTF3C1-211ENST00000569653 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
GTF3C1-211ENST00000569653 MTFR1LQ9H019 292 aa19.21■□□□□ 0.67
GTF3C1-211ENST00000569653 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
GTF3C1-211ENST00000569653 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
GTF3C1-211ENST00000569653 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
GTF3C1-211ENST00000569653 C5P01031 1676 aa19.2■□□□□ 0.66
GTF3C1-211ENST00000569653 WASHC2AQ641Q2 1341 aa19.2■□□□□ 0.66
GTF3C1-211ENST00000569653 PNPLA7Q6ZV29 1317 aa19.2■□□□□ 0.66
GTF3C1-211ENST00000569653 UTRNP46939 3433 aa19.19■□□□□ 0.66
GTF3C1-211ENST00000569653 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
GTF3C1-211ENST00000569653 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
GTF3C1-211ENST00000569653 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
GTF3C1-211ENST00000569653 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
GTF3C1-211ENST00000569653 EYA1Q99502 592 aa19.18■□□□□ 0.66
GTF3C1-211ENST00000569653 FHDC1Q9C0D6 1143 aaPredicted RBP19.18■□□□□ 0.66
GTF3C1-211ENST00000569653 PCDH11XQ9BZA7 1347 aa19.17■□□□□ 0.66
GTF3C1-211ENST00000569653 PCDH11YQ9BZA8 1340 aa19.17■□□□□ 0.66
GTF3C1-211ENST00000569653 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
GTF3C1-211ENST00000569653 PANK3Q9H999 370 aa19.16■□□□□ 0.66
GTF3C1-211ENST00000569653 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
GTF3C1-211ENST00000569653 EIF4A2Q14240 407 aaKnown RBP19.14■□□□□ 0.65
GTF3C1-211ENST00000569653 SYT17Q9BSW7 474 aa19.14■□□□□ 0.65
GTF3C1-211ENST00000569653 PALLDQ8WX93 1383 aa19.12■□□□□ 0.65
GTF3C1-211ENST00000569653 ARXQ96QS3 562 aa19.12■□□□□ 0.65
GTF3C1-211ENST00000569653 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
GTF3C1-211ENST00000569653 UBR3Q6ZT12 1888 aa19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 C4BP0C0L5 1744 aa19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 NKX1-1Q15270 411 aaPredicted RBP19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 MPRIPQ6WCQ1 1025 aa19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 AMIGO3Q86WK7 504 aa19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 TFCP2L1Q9NZI6 479 aa19.11■□□□□ 0.65
GTF3C1-211ENST00000569653 MAP3K5Q99683 1374 aa19.1■□□□□ 0.65
GTF3C1-211ENST00000569653 PIGBQ92521 554 aa19.1■□□□□ 0.65
GTF3C1-211ENST00000569653 YY1P25490 414 aa19.09■□□□□ 0.65
GTF3C1-211ENST00000569653 COL23A1Q86Y22 540 aaPredicted RBP19.09■□□□□ 0.65
GTF3C1-211ENST00000569653 IGSF1Q8N6C5 1336 aa19.08■□□□□ 0.65
GTF3C1-211ENST00000569653 CHD4Q14839 1912 aa19.08■□□□□ 0.64
GTF3C1-211ENST00000569653 SLC16A10Q8TF71 515 aa19.07■□□□□ 0.64
GTF3C1-211ENST00000569653 KIF7Q2M1P5 1343 aa19.06■□□□□ 0.64
GTF3C1-211ENST00000569653 PHKG2P15735 406 aa19.06■□□□□ 0.64
GTF3C1-211ENST00000569653 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
GTF3C1-211ENST00000569653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.06■□□□□ 0.647e-7■■■□□ 15.3
GTF3C1-211ENST00000569653 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
GTF3C1-211ENST00000569653 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
GTF3C1-211ENST00000569653 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
GTF3C1-211ENST00000569653 KDM6AO15550 1401 aaPredicted RBP19.03■□□□□ 0.64
GTF3C1-211ENST00000569653 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
GTF3C1-211ENST00000569653 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
GTF3C1-211ENST00000569653 ASAP1Q9ULH1 1129 aa19.03■□□□□ 0.64
GTF3C1-211ENST00000569653 LINC00116Q8NCU8 138 aa19.02■□□□□ 0.64
GTF3C1-211ENST00000569653 ITPK1Q13572 414 aa19.01■□□□□ 0.63
GTF3C1-211ENST00000569653 MORC1Q86VD1 984 aa19.01■□□□□ 0.63
GTF3C1-211ENST00000569653 IFNL2Q8IZJ0 200 aa19.01■□□□□ 0.63
GTF3C1-211ENST00000569653 COL5A3P25940 1745 aaPredicted RBP19■□□□□ 0.63
GTF3C1-211ENST00000569653 SMARCC1Q92922 1105 aaPredicted RBP19■□□□□ 0.63
GTF3C1-211ENST00000569653 ATG3Q9NT62 314 aa19■□□□□ 0.63
GTF3C1-211ENST00000569653 KDRP35968 1356 aa19■□□□□ 0.63
GTF3C1-211ENST00000569653 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
GTF3C1-211ENST00000569653 VIRMAQ69YN4 1812 aaKnown RBP19■□□□□ 0.63
GTF3C1-211ENST00000569653 LOC102724428A0A0B4J2F2 783 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 POLD1P28340 1107 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 SIK1P57059 783 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 KLHL34Q8N239 644 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 SLC4A9Q96Q91 983 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 TMOD3Q9NYL9 352 aa18.99■□□□□ 0.63
GTF3C1-211ENST00000569653 ZNF831Q5JPB2 1677 aa18.98■□□□□ 0.63
GTF3C1-211ENST00000569653 DCAF8L1A6NGE4 600 aa18.98■□□□□ 0.63
GTF3C1-211ENST00000569653 MSH5O43196 834 aa18.98■□□□□ 0.63
GTF3C1-211ENST00000569653 MYH14Q7Z406 1995 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-211ENST00000569653 SCN11AQ9UI33 1791 aa18.98■□□□□ 0.63
GTF3C1-211ENST00000569653 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms