RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 IL16Q14005 1332 aa23.57■■□□□ 1.36
KLHDC4-225ENST00000569487 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
KLHDC4-225ENST00000569487 SLIT3O75094 1523 aa23.57■■□□□ 1.36
KLHDC4-225ENST00000569487 FLT4P35916 1363 aa23.57■■□□□ 1.36
KLHDC4-225ENST00000569487 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
KLHDC4-225ENST00000569487 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
KLHDC4-225ENST00000569487 HDAC1Q13547 482 aaPredicted RBP23.56■■□□□ 1.36
KLHDC4-225ENST00000569487 ARHGEF25Q86VW2 580 aa23.56■■□□□ 1.36
KLHDC4-225ENST00000569487 RSPH6AQ9H0K4 717 aa23.56■■□□□ 1.36
KLHDC4-225ENST00000569487 PRKAR2BP31323 418 aa23.55■■□□□ 1.36
KLHDC4-225ENST00000569487 CHRNA2Q15822 529 aa23.55■■□□□ 1.36
KLHDC4-225ENST00000569487 KCNH5Q8NCM2 988 aa23.55■■□□□ 1.36
KLHDC4-225ENST00000569487 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
KLHDC4-225ENST00000569487 TMPOP42166 694 aaKnown RBP23.54■■□□□ 1.36
KLHDC4-225ENST00000569487 TBC1D2Q9BYX2 928 aa23.54■■□□□ 1.36
KLHDC4-225ENST00000569487 SULT6B1Q6IMI4 303 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 EYA1Q99502 592 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 TRIM35Q9UPQ4 493 aa23.53■■□□□ 1.36
KLHDC4-225ENST00000569487 UBAP1LF5GYI3 381 aa23.52■■□□□ 1.36
KLHDC4-225ENST00000569487 EXOSC9Q06265 439 aaKnown RBP23.52■■□□□ 1.36
KLHDC4-225ENST00000569487 IP6K1Q92551 441 aa23.52■■□□□ 1.36
KLHDC4-225ENST00000569487 TSR2Q969E8 191 aaKnown RBP23.52■■□□□ 1.35
KLHDC4-225ENST00000569487 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
KLHDC4-225ENST00000569487 TRIM27P14373 513 aa23.5■■□□□ 1.35
KLHDC4-225ENST00000569487 PHRF1Q9P1Y6 1649 aaKnown RBP23.5■■□□□ 1.35
KLHDC4-225ENST00000569487 FCHSD2O94868 740 aa23.49■■□□□ 1.35
KLHDC4-225ENST00000569487 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
KLHDC4-225ENST00000569487 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
KLHDC4-225ENST00000569487 RGPD5Q99666 1765 aa23.49■■□□□ 1.35
KLHDC4-225ENST00000569487 CRYBG1Q9Y4K1 1723 aa23.49■■□□□ 1.35
KLHDC4-225ENST00000569487 ARHGEF10O15013 1369 aa23.48■■□□□ 1.35
KLHDC4-225ENST00000569487 TOM1O60784 492 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 SMC5Q8IY18 1101 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 KIAA0232Q92628 1395 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 NBPF6Q5VWK0 638 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 NBPF4Q96M43 638 aa23.47■■□□□ 1.35
KLHDC4-225ENST00000569487 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
KLHDC4-225ENST00000569487 CERKQ8TCT0 537 aa23.45■■□□□ 1.35
KLHDC4-225ENST00000569487 C22orf23Q9BZE7 217 aa23.45■■□□□ 1.34
KLHDC4-225ENST00000569487 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
KLHDC4-225ENST00000569487 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
KLHDC4-225ENST00000569487 L1TD1Q5T7N2 865 aaKnown RBP23.44■■□□□ 1.34
KLHDC4-225ENST00000569487 FAM43AQ8N2R8 423 aa23.44■■□□□ 1.34
KLHDC4-225ENST00000569487 NOB1Q9ULX3 412 aaKnown RBP23.44■■□□□ 1.34
KLHDC4-225ENST00000569487 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
KLHDC4-225ENST00000569487 IGSF1Q8N6C5 1336 aa23.43■■□□□ 1.34
KLHDC4-225ENST00000569487 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 IPO8O15397 1037 aaKnown RBP23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 ZBTB40Q9NUA8 1239 aa23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 RIPK4P57078 832 aa23.42■■□□□ 1.34
KLHDC4-225ENST00000569487 AHDC1Q5TGY3 1603 aaPredicted RBP23.41■■□□□ 1.34
KLHDC4-225ENST00000569487 HAP1P54257 671 aaPredicted RBP23.41■■□□□ 1.34
KLHDC4-225ENST00000569487 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
KLHDC4-225ENST00000569487 COL18A1P39060 1754 aa23.4■■□□□ 1.34
KLHDC4-225ENST00000569487 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
KLHDC4-225ENST00000569487 FAM83GA6ND36 823 aa23.39■■□□□ 1.33
KLHDC4-225ENST00000569487 BRPF1P55201 1214 aaPredicted RBP23.39■■□□□ 1.33
KLHDC4-225ENST00000569487 ZNF428Q96B54 188 aa23.39■■□□□ 1.33
KLHDC4-225ENST00000569487 CHMP5Q9NZZ3 219 aa23.39■■□□□ 1.33
KLHDC4-225ENST00000569487 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
KLHDC4-225ENST00000569487 ABCA3Q99758 1704 aa23.38■■□□□ 1.33
KLHDC4-225ENST00000569487 MFAP1P55081 439 aaKnown RBP23.38■■□□□ 1.33
KLHDC4-225ENST00000569487 DCTN1Q14203 1278 aa23.38■■□□□ 1.33
KLHDC4-225ENST00000569487 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
KLHDC4-225ENST00000569487 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
KLHDC4-225ENST00000569487 MCM4P33991 863 aa23.36■■□□□ 1.33
KLHDC4-225ENST00000569487 NUCB1Q02818 461 aa23.36■■□□□ 1.33
KLHDC4-225ENST00000569487 NFE2L2Q16236 605 aa23.36■■□□□ 1.33
KLHDC4-225ENST00000569487 ERBB3P21860 1342 aa23.36■■□□□ 1.33
KLHDC4-225ENST00000569487 KDRP35968 1356 aa23.35■■□□□ 1.33
KLHDC4-225ENST00000569487 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
KLHDC4-225ENST00000569487 CPDO75976 1380 aa23.34■■□□□ 1.33
KLHDC4-225ENST00000569487 DLG5Q8TDM6 1919 aa23.34■■□□□ 1.33
KLHDC4-225ENST00000569487 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.33
KLHDC4-225ENST00000569487 RBM25P49756 843 aaKnown RBP23.33■■□□□ 1.33
KLHDC4-225ENST00000569487 NUTM2BA6NNL0 878 aaPredicted RBP23.32■■□□□ 1.32
KLHDC4-225ENST00000569487 NUTM2EB1AL46 878 aaPredicted RBP23.32■■□□□ 1.32
KLHDC4-225ENST00000569487 NUTM2AQ8IVF1 878 aaPredicted RBP23.32■■□□□ 1.32
KLHDC4-225ENST00000569487 HSCBQ8IWL3 235 aa23.32■■□□□ 1.32
KLHDC4-225ENST00000569487 NLRP2Q9NX02 1062 aa23.32■■□□□ 1.32
KLHDC4-225ENST00000569487 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
KLHDC4-225ENST00000569487 CSB-PGBD3P0DP91 1061 aa23.31■■□□□ 1.32
KLHDC4-225ENST00000569487 SNX21Q969T3 373 aa23.31■■□□□ 1.32
KLHDC4-225ENST00000569487 CHMP4BQ9H444 224 aaKnown RBP23.31■■□□□ 1.32
KLHDC4-225ENST00000569487 FSD2A1L4K1 749 aa23.3■■□□□ 1.32
KLHDC4-225ENST00000569487 MCM10Q7L590 875 aa23.29■■□□□ 1.32
KLHDC4-225ENST00000569487 STRN4Q9NRL3 753 aa23.29■■□□□ 1.32
KLHDC4-225ENST00000569487 CHD1LQ86WJ1 897 aa23.29■■□□□ 1.32
KLHDC4-225ENST00000569487 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
KLHDC4-225ENST00000569487 SPRYD3Q8NCJ5 442 aa23.28■■□□□ 1.32
KLHDC4-225ENST00000569487 DDIT3P35638 169 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms