RNA–Protein interactions for RNA: ENST00000568964.5

LMF1-213, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 853 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-213ENST00000568964 BCL11BQ9C0K0 894 aaPredicted RBP25.87■■□□□ 1.73
LMF1-213ENST00000568964 EN1Q05925 392 aaPredicted RBP25.86■■□□□ 1.73
LMF1-213ENST00000568964 PCDH11XQ9BZA7 1347 aa25.86■■□□□ 1.73
LMF1-213ENST00000568964 PCDH11YQ9BZA8 1340 aa25.86■■□□□ 1.73
LMF1-213ENST00000568964 SPG7Q9UQ90 795 aa25.85■■□□□ 1.73
LMF1-213ENST00000568964 DIAPH1O60610 1272 aaKnown RBP25.84■■□□□ 1.73
LMF1-213ENST00000568964 IL13P35225 146 aa25.84■■□□□ 1.73
LMF1-213ENST00000568964 ACSBG1Q96GR2 724 aa25.84■■□□□ 1.73
LMF1-213ENST00000568964 CFAP53Q96M91 514 aa25.83■■□□□ 1.73
LMF1-213ENST00000568964 PARD3Q8TEW0 1356 aa25.82■■□□□ 1.72
LMF1-213ENST00000568964 PPP2R1AP30153 589 aa25.8■■□□□ 1.72
LMF1-213ENST00000568964 EZH2Q15910 746 aaKnown RBP25.8■■□□□ 1.72
LMF1-213ENST00000568964 SULT6B1Q6IMI4 303 aa25.8■■□□□ 1.72
LMF1-213ENST00000568964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.8■■□□□ 1.72
LMF1-213ENST00000568964 PLEKHG2Q9H7P9 1386 aa25.8■■□□□ 1.72
LMF1-213ENST00000568964 SBF2Q86WG5 1849 aa25.79■■□□□ 1.72
LMF1-213ENST00000568964 KCNQ2O43526 872 aa25.79■■□□□ 1.72
LMF1-213ENST00000568964 SHANK3Q9BYB0 1731 aa25.78■■□□□ 1.72
LMF1-213ENST00000568964 PTF1AQ7RTS3 328 aa25.78■■□□□ 1.72
LMF1-213ENST00000568964 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
LMF1-213ENST00000568964 CAMKK2Q96RR4 588 aa25.78■■□□□ 1.72
LMF1-213ENST00000568964 NHSQ6T4R5 1651 aa25.77■■□□□ 1.72
LMF1-213ENST00000568964 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
LMF1-213ENST00000568964 CYP27B1O15528 508 aa25.76■■□□□ 1.71
LMF1-213ENST00000568964 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
LMF1-213ENST00000568964 PKD1L3Q7Z443 1732 aa25.76■■□□□ 1.71
LMF1-213ENST00000568964 U2SURPO15042 1029 aaKnown RBP25.75■■□□□ 1.71
LMF1-213ENST00000568964 PLSCR1O15162 318 aa25.75■■□□□ 1.71
LMF1-213ENST00000568964 COL3A1P02461 1466 aaPredicted RBP25.74■■□□□ 1.71
LMF1-213ENST00000568964 KDRP35968 1356 aa25.74■■□□□ 1.71
LMF1-213ENST00000568964 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
LMF1-213ENST00000568964 ZNF316A6NFI3 1004 aaPredicted RBP25.73■■□□□ 1.71
LMF1-213ENST00000568964 HMOX1P09601 288 aa25.73■■□□□ 1.71
LMF1-213ENST00000568964 PRIM1P49642 420 aaKnown RBP25.73■■□□□ 1.71
LMF1-213ENST00000568964 IFNL2Q8IZJ0 200 aa25.73■■□□□ 1.71
LMF1-213ENST00000568964 RALBP1Q15311 655 aa25.72■■□□□ 1.71
LMF1-213ENST00000568964 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
LMF1-213ENST00000568964 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
LMF1-213ENST00000568964 PHKG2P15735 406 aa25.7■■□□□ 1.7
LMF1-213ENST00000568964 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
LMF1-213ENST00000568964 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
LMF1-213ENST00000568964 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
LMF1-213ENST00000568964 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
LMF1-213ENST00000568964 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
LMF1-213ENST00000568964 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
LMF1-213ENST00000568964 NBPF14Q5TI25 921 aa25.67■■□□□ 1.7
LMF1-213ENST00000568964 BTAF1O14981 1849 aa25.65■■□□□ 1.7
LMF1-213ENST00000568964 RREB1Q92766 1687 aa25.65■■□□□ 1.7
LMF1-213ENST00000568964 TXNRD1Q16881 649 aa25.65■■□□□ 1.7
LMF1-213ENST00000568964 MPRIPQ6WCQ1 1025 aa25.64■■□□□ 1.7
LMF1-213ENST00000568964 U2AF1L5P0DN76 240 aaPredicted RBP25.63■■□□□ 1.69
LMF1-213ENST00000568964 U2AF1Q01081 240 aaKnown RBP eCLIP25.63■■□□□ 1.69
LMF1-213ENST00000568964 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
LMF1-213ENST00000568964 DCAF5Q96JK2 942 aa25.62■■□□□ 1.69
LMF1-213ENST00000568964 MYBBP1AQ9BQG0 1328 aaKnown RBP25.62■■□□□ 1.69
LMF1-213ENST00000568964 NUP188Q5SRE5 1749 aa25.61■■□□□ 1.69
LMF1-213ENST00000568964 TMOD3Q9NYL9 352 aa25.61■■□□□ 1.69
LMF1-213ENST00000568964 PSDA5PKW4 1024 aaPredicted RBP25.6■■□□□ 1.69
LMF1-213ENST00000568964 PROM2Q8N271 834 aa25.6■■□□□ 1.69
LMF1-213ENST00000568964 R3HDM1Q15032 1099 aaKnown RBP25.59■■□□□ 1.69
LMF1-213ENST00000568964 AKAP4Q5JQC9 854 aa25.59■■□□□ 1.69
LMF1-213ENST00000568964 TOGARAM1Q9Y4F4 1720 aa25.59■■□□□ 1.69
LMF1-213ENST00000568964 PRKAR2BP31323 418 aa25.57■■□□□ 1.68
LMF1-213ENST00000568964 SLC27A3Q5K4L6 730 aa25.57■■□□□ 1.68
LMF1-213ENST00000568964 ERVV-2B6SEH9 535 aa25.56■■□□□ 1.68
LMF1-213ENST00000568964 MTHFSDQ2M296 383 aaKnown RBP25.56■■□□□ 1.68
LMF1-213ENST00000568964 PIGBQ92521 554 aa25.56■■□□□ 1.68
LMF1-213ENST00000568964 SMARCC1Q92922 1105 aaPredicted RBP25.56■■□□□ 1.68
LMF1-213ENST00000568964 RSPH6AQ9H0K4 717 aa25.56■■□□□ 1.68
LMF1-213ENST00000568964 PRKRIP1Q9H875 184 aaPredicted RBP25.56■■□□□ 1.68
LMF1-213ENST00000568964 GAS2L2Q8NHY3 880 aa25.55■■□□□ 1.68
LMF1-213ENST00000568964 STK32BQ9NY57 414 aa25.55■■□□□ 1.68
LMF1-213ENST00000568964 FCHSD2O94868 740 aa25.54■■□□□ 1.68
LMF1-213ENST00000568964 CABP4P57796 275 aa25.54■■□□□ 1.68
LMF1-213ENST00000568964 PALLDQ8WX93 1383 aa25.54■■□□□ 1.68
LMF1-213ENST00000568964 KDM6AO15550 1401 aaPredicted RBP25.54■■□□□ 1.68
LMF1-213ENST00000568964 CCNL1Q9UK58 526 aaPredicted RBP25.53■■□□□ 1.68
LMF1-213ENST00000568964 NEFMP07197 916 aa25.52■■□□□ 1.68
LMF1-213ENST00000568964 ANO8Q9HCE9 1232 aaPredicted RBP25.52■■□□□ 1.68
LMF1-213ENST00000568964 ITGB4P16144 1822 aa25.51■■□□□ 1.67
LMF1-213ENST00000568964 HMGB2P26583 209 aaKnown RBP25.5■■□□□ 1.67
LMF1-213ENST00000568964 LRRC4BQ9NT99 713 aa25.5■■□□□ 1.67
LMF1-213ENST00000568964 PNNQ9H307 717 aaKnown RBP25.49■■□□□ 1.67
LMF1-213ENST00000568964 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
LMF1-213ENST00000568964 SLC15A2Q16348 729 aa25.48■■□□□ 1.67
LMF1-213ENST00000568964 PHACTR3Q96KR7 559 aa25.48■■□□□ 1.67
LMF1-213ENST00000568964 LY75O60449 1722 aa25.47■■□□□ 1.67
LMF1-213ENST00000568964 GNAT3A8MTJ3 354 aa25.47■■□□□ 1.67
LMF1-213ENST00000568964 RNMTO43148 476 aaKnown RBP25.47■■□□□ 1.67
LMF1-213ENST00000568964 KCNQ4P56696 695 aa25.47■■□□□ 1.67
LMF1-213ENST00000568964 ASAP1Q9ULH1 1129 aa25.47■■□□□ 1.67
LMF1-213ENST00000568964 NFATC2IPQ8NCF5 419 aa25.46■■□□□ 1.67
LMF1-213ENST00000568964 LGR6Q9HBX8 967 aa25.46■■□□□ 1.67
LMF1-213ENST00000568964 ATG3Q9NT62 314 aa25.45■■□□□ 1.66
LMF1-213ENST00000568964 ANP32CO43423 234 aa25.44■■□□□ 1.66
LMF1-213ENST00000568964 WDR43Q15061 677 aaKnown RBP eCLIP25.44■■□□□ 1.66
LMF1-213ENST00000568964 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
LMF1-213ENST00000568964 PAPPAQ13219 1627 aa25.44■■□□□ 1.66
LMF1-213ENST00000568964 MAPK8IP3Q9UPT6 1336 aa25.43■■□□□ 1.66
LMF1-213ENST00000568964 LOC102724428A0A0B4J2F2 783 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms