RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PPM1GO15355 546 aaPredicted RBP34.59■■■■□ 3.13
FANCA-228ENST00000567943 DDX54Q8TDD1 881 aaKnown RBP34.59■■■■□ 3.13
FANCA-228ENST00000567943 BTAF1O14981 1849 aa34.58■■■■□ 3.13
FANCA-228ENST00000567943 TNNT2P45379 298 aaPredicted RBP34.58■■■■□ 3.13
FANCA-228ENST00000567943 LRP5O75197 1615 aa34.56■■■■□ 3.12
FANCA-228ENST00000567943 ZCRB1Q8TBF4 217 aaKnown RBP34.56■■■■□ 3.12
FANCA-228ENST00000567943 NCAPD2Q15021 1401 aa34.55■■■■□ 3.12
FANCA-228ENST00000567943 NSD2O96028 1365 aa34.55■■■■□ 3.12
FANCA-228ENST00000567943 DOT1LQ8TEK3 1739 aa34.52■■■■□ 3.12
FANCA-228ENST00000567943 RAPGEF4Q8WZA2 1011 aa34.5■■■■□ 3.11
FANCA-228ENST00000567943 TXNRD1Q16881 649 aa34.49■■■■□ 3.11
FANCA-228ENST00000567943 AMER1Q5JTC6 1135 aaPredicted RBP34.49■■■■□ 3.11
FANCA-228ENST00000567943 NBPF14Q5TI25 921 aa34.49■■■■□ 3.11
FANCA-228ENST00000567943 ANO8Q9HCE9 1232 aaPredicted RBP34.49■■■■□ 3.11
FANCA-228ENST00000567943 KNSTRNQ9Y448 316 aa34.48■■■■□ 3.11
FANCA-228ENST00000567943 TATP17735 454 aaPredicted RBP34.47■■■■□ 3.11
FANCA-228ENST00000567943 EYA1Q99502 592 aa34.47■■■■□ 3.11
FANCA-228ENST00000567943 PKD1L3Q7Z443 1732 aa34.47■■■■□ 3.11
FANCA-228ENST00000567943 PER1O15534 1290 aaPredicted RBP34.46■■■■□ 3.11
FANCA-228ENST00000567943 EIF4A2Q14240 407 aaKnown RBP34.45■■■■□ 3.11
FANCA-228ENST00000567943 MORC1Q86VD1 984 aa34.44■■■■□ 3.1
FANCA-228ENST00000567943 PRIM1P49642 420 aaKnown RBP34.42■■■■□ 3.1
FANCA-228ENST00000567943 CYP27B1O15528 508 aa34.4■■■■□ 3.1
FANCA-228ENST00000567943 PAPPAQ13219 1627 aa34.39■■■■□ 3.1
FANCA-228ENST00000567943 PCDH11XQ9BZA7 1347 aa34.38■■■■□ 3.09
FANCA-228ENST00000567943 PCDH11YQ9BZA8 1340 aa34.38■■■■□ 3.09
FANCA-228ENST00000567943 CASZ1Q86V15 1759 aa34.38■■■■□ 3.09
FANCA-228ENST00000567943 SYTL4Q96C24 671 aaPredicted RBP34.37■■■■□ 3.09
FANCA-228ENST00000567943 TOGARAM1Q9Y4F4 1720 aa34.36■■■■□ 3.09
FANCA-228ENST00000567943 LRRC4BQ9NT99 713 aa34.36■■■■□ 3.09
FANCA-228ENST00000567943 PDGFDQ9GZP0 370 aaPredicted RBP34.35■■■■□ 3.09
FANCA-228ENST00000567943 LY75O60449 1722 aa34.35■■■■□ 3.09
FANCA-228ENST00000567943 IGSF1Q8N6C5 1336 aa34.34■■■■□ 3.09
FANCA-228ENST00000567943 ITGB4P16144 1822 aa34.32■■■■□ 3.08
FANCA-228ENST00000567943 SLC15A2Q16348 729 aa34.3■■■■□ 3.08
FANCA-228ENST00000567943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.29■■■■□ 3.089e-7■■■□□ 17.2
FANCA-228ENST00000567943 CC2D1BQ5T0F9 858 aaKnown RBP34.28■■■■□ 3.08
FANCA-228ENST00000567943 STK32BQ9NY57 414 aa34.27■■■■□ 3.08
FANCA-228ENST00000567943 SPG7Q9UQ90 795 aa34.27■■■■□ 3.08
FANCA-228ENST00000567943 KCNQ4P56696 695 aa34.26■■■■□ 3.08
FANCA-228ENST00000567943 NKX1-1Q15270 411 aaPredicted RBP34.26■■■■□ 3.08
FANCA-228ENST00000567943 ZNF827Q17R98 1081 aa34.24■■■■□ 3.07
FANCA-228ENST00000567943 SLC27A3Q5K4L6 730 aa34.24■■■■□ 3.07
FANCA-228ENST00000567943 NPC1L1Q9UHC9 1359 aa34.23■■■■□ 3.07
FANCA-228ENST00000567943 IL13P35225 146 aa34.23■■■■□ 3.07
FANCA-228ENST00000567943 AEBP1Q8IUX7 1158 aa34.23■■■■□ 3.07
FANCA-228ENST00000567943 MTHFSP49914 203 aa34.22■■■■□ 3.07
FANCA-228ENST00000567943 PLEKHG2Q9H7P9 1386 aa34.22■■■■□ 3.07
FANCA-228ENST00000567943 PHKG2P15735 406 aa34.2■■■■□ 3.07
FANCA-228ENST00000567943 SPON1Q9HCB6 807 aa34.2■■■■□ 3.07
FANCA-228ENST00000567943 TUBGCP6Q96RT7 1819 aa34.19■■■■□ 3.06
FANCA-228ENST00000567943 MPRIPQ6WCQ1 1025 aa34.19■■■■□ 3.06
FANCA-228ENST00000567943 AKT1S1Q96B36 256 aa34.19■■■■□ 3.06
FANCA-228ENST00000567943 CNGB1Q14028 1251 aaPredicted RBP34.18■■■■□ 3.06
FANCA-228ENST00000567943 KDRP35968 1356 aa34.17■■■■□ 3.06
FANCA-228ENST00000567943 IFNL2Q8IZJ0 200 aa34.17■■■■□ 3.06
FANCA-228ENST00000567943 QSER1Q2KHR3 1735 aa34.16■■■■□ 3.06
FANCA-228ENST00000567943 ZBTB7AO95365 584 aa34.16■■■■□ 3.06
FANCA-228ENST00000567943 PIGBQ92521 554 aa34.15■■■■□ 3.06
FANCA-228ENST00000567943 SULT6B1Q6IMI4 303 aa34.14■■■■□ 3.06
FANCA-228ENST00000567943 CCNL1Q9UK58 526 aaPredicted RBP34.14■■■■□ 3.06
FANCA-228ENST00000567943 TAF1LQ8IZX4 1826 aa34.13■■■■□ 3.05
FANCA-228ENST00000567943 PALLDQ8WX93 1383 aa34.11■■■■□ 3.05
FANCA-228ENST00000567943 PTGER2P43116 358 aa34.11■■■■□ 3.05
FANCA-228ENST00000567943 C5P01031 1676 aa34.11■■■■□ 3.05
FANCA-228ENST00000567943 COL3A1P02461 1466 aaPredicted RBP34.09■■■■□ 3.05
FANCA-228ENST00000567943 PLEKHO1Q53GL0 409 aaPredicted RBP34.09■■■■□ 3.05
FANCA-228ENST00000567943 ATF5Q9Y2D1 282 aaPredicted RBP34.09■■■■□ 3.05
FANCA-228ENST00000567943 PNPLA7Q6ZV29 1317 aa34.06■■■■□ 3.04
FANCA-228ENST00000567943 KDM6AO15550 1401 aaPredicted RBP34.06■■■■□ 3.04
FANCA-228ENST00000567943 AMOTQ4VCS5 1084 aa34.06■■■■□ 3.04
FANCA-228ENST00000567943 ZNF530Q6P9A1 599 aaPredicted RBP34.05■■■■□ 3.04
FANCA-228ENST00000567943 SGIP1Q9BQI5 828 aa34.05■■■■□ 3.04
FANCA-228ENST00000567943 MTFR1LQ9H019 292 aa34.05■■■■□ 3.04
FANCA-228ENST00000567943 TMOD3Q9NYL9 352 aa34.04■■■■□ 3.04
FANCA-228ENST00000567943 DIAPH1O60610 1272 aaKnown RBP34.03■■■■□ 3.04
FANCA-228ENST00000567943 SMARCC1Q92922 1105 aaPredicted RBP34.03■■■■□ 3.04
FANCA-228ENST00000567943 ASAP1Q9ULH1 1129 aa34.03■■■■□ 3.04
FANCA-228ENST00000567943 DCAF5Q96JK2 942 aa34.02■■■■□ 3.04
FANCA-228ENST00000567943 TFCP2L1Q9NZI6 479 aa34.02■■■■□ 3.04
FANCA-228ENST00000567943 HMOX1P09601 288 aa34.01■■■■□ 3.03
FANCA-228ENST00000567943 PPP1R1BQ9UD71 204 aaPredicted RBP34.01■■■■□ 3.03
FANCA-228ENST00000567943 COL24A1Q17RW2 1714 aa34.01■■■■□ 3.03
FANCA-228ENST00000567943 ERVV-2B6SEH9 535 aa33.99■■■■□ 3.03
FANCA-228ENST00000567943 HSP90AB1P08238 724 aaKnown RBP33.99■■■■□ 3.03
FANCA-228ENST00000567943 ATG3Q9NT62 314 aa33.99■■■■□ 3.03
FANCA-228ENST00000567943 C4BP0C0L5 1744 aa33.99■■■■□ 3.03
FANCA-228ENST00000567943 SCN11AQ9UI33 1791 aa33.98■■■■□ 3.03
FANCA-228ENST00000567943 ZEB1P37275 1124 aaPredicted RBP33.97■■■■□ 3.03
FANCA-228ENST00000567943 LOC102724428A0A0B4J2F2 783 aa33.95■■■■□ 3.03
FANCA-228ENST00000567943 SIK1P57059 783 aa33.95■■■■□ 3.03
FANCA-228ENST00000567943 VIRMAQ69YN4 1812 aaKnown RBP33.95■■■■□ 3.02
FANCA-228ENST00000567943 UBR3Q6ZT12 1888 aa33.93■■■■□ 3.02
FANCA-228ENST00000567943 C1orf141Q5JVX7 400 aa33.93■■■■□ 3.02
FANCA-228ENST00000567943 COL23A1Q86Y22 540 aaPredicted RBP33.93■■■■□ 3.02
FANCA-228ENST00000567943 SLC16A10Q8TF71 515 aa33.93■■■■□ 3.02
FANCA-228ENST00000567943 ITPK1Q13572 414 aa33.92■■■■□ 3.02
FANCA-228ENST00000567943 AMIGO3Q86WK7 504 aa33.92■■■■□ 3.02
FANCA-228ENST00000567943 PPP2R1AP30153 589 aa33.91■■■■□ 3.02
FANCA-228ENST00000567943 LINC00116Q8NCU8 138 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms