RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
SHCBP1-206ENST00000567698 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
SHCBP1-206ENST00000567698 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
SHCBP1-206ENST00000567698 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
SHCBP1-206ENST00000567698 NOD1Q9Y239 953 aa9.33□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L12C9JPN9 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L21D6R901 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 GTF2IP78347 998 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 USP4Q13107 963 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 ELOAQ14241 798 aaKnown RBP9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 OGFOD1Q8N543 542 aa9.32□□□□□ -0.92
SHCBP1-206ENST00000567698 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
SHCBP1-206ENST00000567698 MYT1Q01538 1121 aa9.31□□□□□ -0.92
SHCBP1-206ENST00000567698 CBLBQ13191 982 aa9.31□□□□□ -0.92
SHCBP1-206ENST00000567698 Q6ZVU0 165 aa9.31□□□□□ -0.92
SHCBP1-206ENST00000567698 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
SHCBP1-206ENST00000567698 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 ZIC2O95409 532 aaPredicted RBP9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 AVPP01185 164 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 SCNN1DP51172 638 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 SIX5Q8N196 739 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
SHCBP1-206ENST00000567698 RASA1P20936 1047 aa9.29□□□□□ -0.92
SHCBP1-206ENST00000567698 TRIM50Q86XT4 487 aa9.29□□□□□ -0.92
SHCBP1-206ENST00000567698 DNAAF2Q9NVR5 837 aaKnown RBP9.29□□□□□ -0.92
SHCBP1-206ENST00000567698 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 FAM69CQ0P6D2 419 aa9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 LARGE2Q8N3Y3 721 aa9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 SIRT1Q96EB6 747 aa9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
SHCBP1-206ENST00000567698 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
SHCBP1-206ENST00000567698 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
SHCBP1-206ENST00000567698 ADH1AP07327 375 aa9.27□□□□□ -0.93
SHCBP1-206ENST00000567698 TMEM164Q5U3C3 297 aa9.27□□□□□ -0.93
SHCBP1-206ENST00000567698 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
SHCBP1-206ENST00000567698 WASLO00401 505 aaPredicted RBP9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 NRG2O14511 850 aaPredicted RBP9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 GFRA3O60609 400 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 DPYDQ12882 1025 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 ETNK1Q9HBU6 452 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 HRH3Q9Y5N1 445 aa9.26□□□□□ -0.93
SHCBP1-206ENST00000567698 FAM187AA6NFU0 413 aa9.25□□□□□ -0.93
SHCBP1-206ENST00000567698 LARP1Q6PKG0 1096 aaKnown RBP9.25□□□□□ -0.93
SHCBP1-206ENST00000567698 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
SHCBP1-206ENST00000567698 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
SHCBP1-206ENST00000567698 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
SHCBP1-206ENST00000567698 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 DGAT1O75907 488 aa9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 GNRH1P01148 92 aa9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 IL2RAP01589 272 aa9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 ZNF358Q9NW07 568 aa9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
SHCBP1-206ENST00000567698 CAPN5O15484 640 aaPredicted RBP9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 PTGIRP43119 386 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 EPHA4P54764 986 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 GDF10P55107 478 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 CRIPAKQ8N1N5 446 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 USTQ9Y2C2 406 aa9.22□□□□□ -0.93
SHCBP1-206ENST00000567698 INHAP05111 366 aa9.21□□□□□ -0.94
SHCBP1-206ENST00000567698 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
SHCBP1-206ENST00000567698 RAB6BQ9NRW1 208 aa9.21□□□□□ -0.94
SHCBP1-206ENST00000567698 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 M0R2N6 131 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 LCE2BO14633 110 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 SEC13P55735 322 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 PSME1Q06323 249 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 FAM200AQ8TCP9 573 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 SLC4A9Q96Q91 983 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 TRAIPQ9BWF2 469 aa9.2□□□□□ -0.94
SHCBP1-206ENST00000567698 CSB-PGBD3P0DP91 1061 aa9.19□□□□□ -0.94
SHCBP1-206ENST00000567698 RELBQ01201 579 aa9.19□□□□□ -0.94
SHCBP1-206ENST00000567698 CLN3Q13286 438 aa9.19□□□□□ -0.94
SHCBP1-206ENST00000567698 TRIM46Q7Z4K8 759 aa9.19□□□□□ -0.94
SHCBP1-206ENST00000567698 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
SHCBP1-206ENST00000567698 ZNF295-AS1Q8N0V1 137 aa9.18□□□□□ -0.94
SHCBP1-206ENST00000567698 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
SHCBP1-206ENST00000567698 TSEN2Q8NCE0 465 aaKnown RBP9.18□□□□□ -0.94
SHCBP1-206ENST00000567698 FHDC1Q9C0D6 1143 aaPredicted RBP9.18□□□□□ -0.94
SHCBP1-206ENST00000567698 ZNF395Q9H8N7 513 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms