RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 MEIS3Q99687 375 aa13.97□□□□□ -0.17
SIN3A-208ENST00000567289 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
SIN3A-208ENST00000567289 APPP05067 770 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 TPM3P06753 285 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 ME1P48163 572 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
SIN3A-208ENST00000567289 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 TNNT1P13805 278 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 TTC22Q5TAA0 569 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 SNX21Q969T3 373 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
SIN3A-208ENST00000567289 CCDC183Q5T5S1 534 aa13.96□□□□□ -0.18
SIN3A-208ENST00000567289 PDRG1Q9NUG6 133 aa13.96□□□□□ -0.18
SIN3A-208ENST00000567289 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
SIN3A-208ENST00000567289 USP48Q86UV5 1035 aa13.95□□□□□ -0.18
SIN3A-208ENST00000567289 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
SIN3A-208ENST00000567289 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
SIN3A-208ENST00000567289 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.95□□□□□ -0.18
SIN3A-208ENST00000567289 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-208ENST00000567289 ARGLU1Q9NWB6 273 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-208ENST00000567289 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-208ENST00000567289 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 ALDH1L2Q3SY69 923 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 NME9Q86XW9 330 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 CD2BP2O95400 341 aaKnown RBP13.94□□□□□ -0.18
SIN3A-208ENST00000567289 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 POLR3GO15318 223 aaPredicted RBP13.94□□□□□ -0.18
SIN3A-208ENST00000567289 PDCP20941 246 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 NLRP6P59044 892 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 GPS2Q13227 327 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 HDAC5Q9UQL6 1122 aa13.94□□□□□ -0.18
SIN3A-208ENST00000567289 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
SIN3A-208ENST00000567289 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
SIN3A-208ENST00000567289 NOC3LQ8WTT2 800 aaKnown RBP13.93□□□□□ -0.18
SIN3A-208ENST00000567289 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
SIN3A-208ENST00000567289 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
SIN3A-208ENST00000567289 ERBB4Q15303 1308 aa13.92□□□□□ -0.18
SIN3A-208ENST00000567289 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
SIN3A-208ENST00000567289 CCT4P50991 539 aaKnown RBP13.92□□□□□ -0.18
SIN3A-208ENST00000567289 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
SIN3A-208ENST00000567289 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
SIN3A-208ENST00000567289 PSMA5P28066 241 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 STX6O43752 255 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 WASHC4Q2M389 1173 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 KDM5CP41229 1560 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 CPA1P15085 419 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 HSP90AB4PQ58FF6 505 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
SIN3A-208ENST00000567289 AACSQ86V21 672 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 KIF14Q15058 1648 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 TMEM63CQ9P1W3 806 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
SIN3A-208ENST00000567289 STK38Q15208 465 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 PLEKHM2Q8IWE5 1019 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
SIN3A-208ENST00000567289 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
SIN3A-208ENST00000567289 RAB11FIP3O75154 756 aa13.9□□□□□ -0.19
SIN3A-208ENST00000567289 SERPINC1P01008 464 aa13.9□□□□□ -0.19
SIN3A-208ENST00000567289 ISM2Q6H9L7 571 aa13.9□□□□□ -0.19
SIN3A-208ENST00000567289 USP19O94966 1318 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 FSD2A1L4K1 749 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 GJB2P29033 226 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
SIN3A-208ENST00000567289 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
SIN3A-208ENST00000567289 NAT10Q9H0A0 1025 aaKnown RBP13.89□□□□□ -0.19
SIN3A-208ENST00000567289 SYNJ2O15056 1496 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 ANXA1P04083 346 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 MCM5P33992 734 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
SIN3A-208ENST00000567289 BIN1O00499 593 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 ZNF165P49910 485 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 MBD5Q9P267 1494 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.191e-7■■■■■ 32.5
SIN3A-208ENST00000567289 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 PDE1AP54750 535 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
SIN3A-208ENST00000567289 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 FYB1O15117 783 aa13.87□□□□□ -0.19
SIN3A-208ENST00000567289 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-208ENST00000567289 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms