RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 LMO7Q8WWI1 1683 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
BBS4-213ENST00000567279 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 MAP3K5Q99683 1374 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 CRB1P82279 1406 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 LTBP4Q8N2S1 1624 aa15.1■□□□□ 0.01
BBS4-213ENST00000567279 PANK1Q8TE04 598 aa15.09■□□□□ 0.01
BBS4-213ENST00000567279 ERBB3P21860 1342 aa15.09■□□□□ 0.01
BBS4-213ENST00000567279 KIAA0232Q92628 1395 aa15.09■□□□□ 0.01
BBS4-213ENST00000567279 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
BBS4-213ENST00000567279 GNAT3A8MTJ3 354 aa15.08■□□□□ 0.01
BBS4-213ENST00000567279 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
BBS4-213ENST00000567279 CHRNA2Q15822 529 aa15.08■□□□□ 0
BBS4-213ENST00000567279 TNNQ9UQP3 1299 aa15.08■□□□□ 0
BBS4-213ENST00000567279 CPDO75976 1380 aa15.07■□□□□ 0
BBS4-213ENST00000567279 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
BBS4-213ENST00000567279 ALDH1L2Q3SY69 923 aa15.07■□□□□ 0
BBS4-213ENST00000567279 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
BBS4-213ENST00000567279 TSPYL6Q8N831 410 aa15.07■□□□□ 0
BBS4-213ENST00000567279 KIF16BQ96L93 1317 aa15.06■□□□□ 0
BBS4-213ENST00000567279 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
BBS4-213ENST00000567279 CHL1O00533 1208 aa15.06■□□□□ 0
BBS4-213ENST00000567279 COG6Q9Y2V7 657 aa15.06■□□□□ 0
BBS4-213ENST00000567279 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
BBS4-213ENST00000567279 C8orf58Q8NAV2 365 aa15.06■□□□□ 0
BBS4-213ENST00000567279 ZNF428Q96B54 188 aa15.06■□□□□ 0
BBS4-213ENST00000567279 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ 0
BBS4-213ENST00000567279 VAMP4O75379 141 aa15.05■□□□□ -0
BBS4-213ENST00000567279 CLUAP1Q96AJ1 413 aa15.05■□□□□ -0
BBS4-213ENST00000567279 CSB-PGBD3P0DP91 1061 aa15.04■□□□□ -0
BBS4-213ENST00000567279 RLBP1P12271 317 aa15.04■□□□□ -0
BBS4-213ENST00000567279 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
BBS4-213ENST00000567279 ZNF530Q6P9A1 599 aaPredicted RBP15.04■□□□□ -0
BBS4-213ENST00000567279 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
BBS4-213ENST00000567279 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
BBS4-213ENST00000567279 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
BBS4-213ENST00000567279 NOB1Q9ULX3 412 aaKnown RBP15.04■□□□□ -0
BBS4-213ENST00000567279 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
BBS4-213ENST00000567279 AHDC1Q5TGY3 1603 aaPredicted RBP15.03■□□□□ -0
BBS4-213ENST00000567279 MS4A1P11836 297 aa15.03■□□□□ -0
BBS4-213ENST00000567279 DZIP1LQ8IYY4 767 aaKnown RBP15.03■□□□□ -0
BBS4-213ENST00000567279 PRDM11Q9NQV5 511 aa15.03■□□□□ -0
BBS4-213ENST00000567279 TRIM27P14373 513 aa15.02■□□□□ -0
BBS4-213ENST00000567279 KRT24Q2M2I5 525 aa15.02■□□□□ -0
BBS4-213ENST00000567279 AMOTQ4VCS5 1084 aa15.02■□□□□ -0
BBS4-213ENST00000567279 ATF7IPQ6VMQ6 1270 aa15.02■□□□□ -0
BBS4-213ENST00000567279 IL17REQ8NFR9 667 aa15.02■□□□□ -0
BBS4-213ENST00000567279 TCERG1O14776 1098 aaKnown RBP15.01□□□□□ -0.01
BBS4-213ENST00000567279 MRPL50Q8N5N7 158 aaKnown RBP15.01□□□□□ -0.01
BBS4-213ENST00000567279 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
BBS4-213ENST00000567279 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
BBS4-213ENST00000567279 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
BBS4-213ENST00000567279 RAPGEF4Q8WZA2 1011 aa15□□□□□ -0.01
BBS4-213ENST00000567279 MEGF6O75095 1541 aa15□□□□□ -0.01
BBS4-213ENST00000567279 KDM3BQ7LBC6 1761 aa15□□□□□ -0.01
BBS4-213ENST00000567279 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
BBS4-213ENST00000567279 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
BBS4-213ENST00000567279 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
BBS4-213ENST00000567279 TATP17735 454 aaPredicted RBP14.99□□□□□ -0.01
BBS4-213ENST00000567279 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
BBS4-213ENST00000567279 COL5A2P05997 1499 aaPredicted RBP14.98□□□□□ -0.01
BBS4-213ENST00000567279 PKD1L3Q7Z443 1732 aa14.98□□□□□ -0.01
BBS4-213ENST00000567279 TAF7Q15545 349 aaPredicted RBP14.98□□□□□ -0.01
BBS4-213ENST00000567279 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
BBS4-213ENST00000567279 PARP4Q9UKK3 1724 aaKnown RBP14.98□□□□□ -0.01
BBS4-213ENST00000567279 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 LGR6Q9HBX8 967 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 OVOS2A0A0G2JMS6 1433 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 KDM2BQ8NHM5 1336 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 COL22A1Q8NFW1 1626 aaPredicted RBP14.97□□□□□ -0.01
BBS4-213ENST00000567279 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
BBS4-213ENST00000567279 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
BBS4-213ENST00000567279 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
BBS4-213ENST00000567279 TEFQ10587 303 aa14.96□□□□□ -0.01
BBS4-213ENST00000567279 AAMPQ13685 434 aa14.96□□□□□ -0.01
BBS4-213ENST00000567279 BABAM1Q9NWV8 329 aa14.96□□□□□ -0.01
BBS4-213ENST00000567279 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
BBS4-213ENST00000567279 RNMTO43148 476 aaKnown RBP14.95□□□□□ -0.02
BBS4-213ENST00000567279 SCN11AQ9UI33 1791 aa14.95□□□□□ -0.02
BBS4-213ENST00000567279 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
BBS4-213ENST00000567279 DDX19BQ9UMR2 479 aa14.95□□□□□ -0.02
BBS4-213ENST00000567279 SPG7Q9UQ90 795 aa14.95□□□□□ -0.02
BBS4-213ENST00000567279 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
BBS4-213ENST00000567279 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
BBS4-213ENST00000567279 TOM1L2Q6ZVM7 507 aa14.94□□□□□ -0.02
BBS4-213ENST00000567279 COL14A1Q05707 1796 aaKnown RBP14.94□□□□□ -0.02
BBS4-213ENST00000567279 API5Q9BZZ5 524 aaKnown RBP14.93□□□□□ -0.02
BBS4-213ENST00000567279 STRN4Q9NRL3 753 aa14.93□□□□□ -0.02
BBS4-213ENST00000567279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.025e-6■■■□□ 17.1
BBS4-213ENST00000567279 ABCC4O15439 1325 aa14.92□□□□□ -0.02
BBS4-213ENST00000567279 BTBD11A6QL63 1104 aa14.91□□□□□ -0.02
BBS4-213ENST00000567279 KDM6AO15550 1401 aaPredicted RBP14.91□□□□□ -0.02
BBS4-213ENST00000567279 PHKG2P15735 406 aa14.91□□□□□ -0.02
BBS4-213ENST00000567279 SOS1Q07889 1333 aaPredicted RBP14.91□□□□□ -0.02
BBS4-213ENST00000567279 EVA1CP58658 441 aa14.91□□□□□ -0.02
BBS4-213ENST00000567279 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
BBS4-213ENST00000567279 RGS12O14924 1447 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms