RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 C11orf95C9JLR9 678 aaPredicted RBP16.55■□□□□ 0.24
NIFKP4-201ENST00000567275 USP4Q13107 963 aa16.55■□□□□ 0.24
NIFKP4-201ENST00000567275 POTECB2RU33 542 aa16.54■□□□□ 0.24
NIFKP4-201ENST00000567275 NFATC2IPQ8NCF5 419 aa16.54■□□□□ 0.24
NIFKP4-201ENST00000567275 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
NIFKP4-201ENST00000567275 CYP2U1Q7Z449 544 aa16.53■□□□□ 0.24
NIFKP4-201ENST00000567275 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
NIFKP4-201ENST00000567275 ATP5J2-PTCD1G3V325 749 aa16.52■□□□□ 0.24
NIFKP4-201ENST00000567275 UCN2Q96RP3 112 aa16.51■□□□□ 0.23
NIFKP4-201ENST00000567275 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
NIFKP4-201ENST00000567275 ZNF395Q9H8N7 513 aaPredicted RBP16.51■□□□□ 0.23
NIFKP4-201ENST00000567275 PTGIRP43119 386 aa16.5■□□□□ 0.23
NIFKP4-201ENST00000567275 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
NIFKP4-201ENST00000567275 SPINT1O43278 529 aa16.48■□□□□ 0.23
NIFKP4-201ENST00000567275 EML3Q32P44 896 aa16.48■□□□□ 0.23
NIFKP4-201ENST00000567275 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
NIFKP4-201ENST00000567275 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
NIFKP4-201ENST00000567275 SNRPBP14678 240 aaKnown RBP16.47■□□□□ 0.23
NIFKP4-201ENST00000567275 TBC1D9Q6ZT07 1266 aa16.47■□□□□ 0.23
NIFKP4-201ENST00000567275 ATP9BO43861 1147 aa16.46■□□□□ 0.23
NIFKP4-201ENST00000567275 KDF1Q8NAX2 398 aaPredicted RBP16.46■□□□□ 0.23
NIFKP4-201ENST00000567275 NCOA4Q13772 614 aa16.45■□□□□ 0.22
NIFKP4-201ENST00000567275 DEPDC4Q8N2C3 294 aa16.45■□□□□ 0.22
NIFKP4-201ENST00000567275 INSM2Q96T92 566 aaPredicted RBP16.45■□□□□ 0.22
NIFKP4-201ENST00000567275 POLMQ9NP87 494 aaPredicted RBP16.45■□□□□ 0.22
NIFKP4-201ENST00000567275 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
NIFKP4-201ENST00000567275 TTLL8A6PVC2 850 aa16.42■□□□□ 0.22
NIFKP4-201ENST00000567275 MAN1A2O60476 641 aa16.42■□□□□ 0.22
NIFKP4-201ENST00000567275 ARHGEF10LQ9HCE6 1279 aa16.42■□□□□ 0.22
NIFKP4-201ENST00000567275 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
NIFKP4-201ENST00000567275 SOS2Q07890 1332 aaPredicted RBP16.42■□□□□ 0.22
NIFKP4-201ENST00000567275 A0A1W2PRU2 124 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 MEN1O00255 615 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 GNRH1P01148 92 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 USP17L2Q6R6M4 530 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
NIFKP4-201ENST00000567275 CTSOP43234 321 aaPredicted RBP16.4■□□□□ 0.22
NIFKP4-201ENST00000567275 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
NIFKP4-201ENST00000567275 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
NIFKP4-201ENST00000567275 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
NIFKP4-201ENST00000567275 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
NIFKP4-201ENST00000567275 RAB6BQ9NRW1 208 aa16.38■□□□□ 0.21
NIFKP4-201ENST00000567275 FIGNL2A6NMB9 653 aa16.37■□□□□ 0.21
NIFKP4-201ENST00000567275 SOBPA7XYQ1 873 aa16.37■□□□□ 0.21
NIFKP4-201ENST00000567275 ESCO1Q5FWF5 840 aa16.36■□□□□ 0.21
NIFKP4-201ENST00000567275 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
NIFKP4-201ENST00000567275 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
NIFKP4-201ENST00000567275 CLN3Q13286 438 aa16.35■□□□□ 0.21
NIFKP4-201ENST00000567275 DNMT3LQ9UJW3 386 aa16.35■□□□□ 0.21
NIFKP4-201ENST00000567275 GTF2IP78347 998 aa16.34■□□□□ 0.21
NIFKP4-201ENST00000567275 PSME1Q06323 249 aa16.34■□□□□ 0.21
NIFKP4-201ENST00000567275 TRIM50Q86XT4 487 aa16.34■□□□□ 0.21
NIFKP4-201ENST00000567275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.33■□□□□ 0.2
NIFKP4-201ENST00000567275 RNF217Q8TC41 542 aa16.32■□□□□ 0.2
NIFKP4-201ENST00000567275 CNKSR1Q969H4 720 aa16.32■□□□□ 0.2
NIFKP4-201ENST00000567275 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
NIFKP4-201ENST00000567275 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
NIFKP4-201ENST00000567275 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
NIFKP4-201ENST00000567275 RNF144AP50876 292 aaPredicted RBP16.31■□□□□ 0.2
NIFKP4-201ENST00000567275 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
NIFKP4-201ENST00000567275 FOXD4L5Q5VV16 416 aaPredicted RBP16.31■□□□□ 0.2
NIFKP4-201ENST00000567275 PCDHGA11Q9Y5H2 935 aa16.31■□□□□ 0.2
NIFKP4-201ENST00000567275 STAU1O95793 577 aaKnown RBP16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 IL2RAP01589 272 aa16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 GPC1P35052 558 aa16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 ATP1A2P50993 1020 aa16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 CCDC97Q96F63 343 aaPredicted RBP16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 ETNK1Q9HBU6 452 aa16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
NIFKP4-201ENST00000567275 GDF10P55107 478 aa16.29■□□□□ 0.2
NIFKP4-201ENST00000567275 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
NIFKP4-201ENST00000567275 LYSMD3Q7Z3D4 306 aa16.27■□□□□ 0.2
NIFKP4-201ENST00000567275 INHAP05111 366 aa16.26■□□□□ 0.19
NIFKP4-201ENST00000567275 SCNN1DP51172 638 aa16.26■□□□□ 0.19
NIFKP4-201ENST00000567275 PRICKLE2Q7Z3G6 844 aa16.26■□□□□ 0.19
NIFKP4-201ENST00000567275 CENPCQ03188 943 aa16.25■□□□□ 0.19
NIFKP4-201ENST00000567275 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
NIFKP4-201ENST00000567275 OGFOD1Q8N543 542 aa16.25■□□□□ 0.19
NIFKP4-201ENST00000567275 DNAAF2Q9NVR5 837 aaKnown RBP16.25■□□□□ 0.19
NIFKP4-201ENST00000567275 RFX1P22670 979 aa16.24■□□□□ 0.19
NIFKP4-201ENST00000567275 SERPINA10Q9UK55 444 aa16.24■□□□□ 0.19
NIFKP4-201ENST00000567275 RASA1P20936 1047 aa16.23■□□□□ 0.19
NIFKP4-201ENST00000567275 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
NIFKP4-201ENST00000567275 CLDN10P78369 228 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 TLR1Q15399 786 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 ZSCAN10Q96SZ4 725 aaPredicted RBP16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 GRIP2Q9C0E4 1043 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 VRTNQ9H8Y1 702 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 SERTAD1Q9UHV2 236 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 HRH3Q9Y5N1 445 aa16.22■□□□□ 0.19
NIFKP4-201ENST00000567275 TMEM229AB2RXF0 380 aa16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 TPCN2Q8NHX9 752 aa16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
NIFKP4-201ENST00000567275 PTSQ03393 145 aa16.2■□□□□ 0.18
NIFKP4-201ENST00000567275 CCDC102BQ68D86 513 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms