RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TRIM27P14373 513 aa29.68■■■□□ 2.34
LINC00543-201ENST00000567234 NOB1Q9ULX3 412 aaKnown RBP29.67■■■□□ 2.34
LINC00543-201ENST00000567234 GAS2L2Q8NHY3 880 aa29.65■■■□□ 2.34
LINC00543-201ENST00000567234 IP6K1Q92551 441 aa29.64■■■□□ 2.33
LINC00543-201ENST00000567234 ARHGAP45Q92619 1136 aa29.64■■■□□ 2.33
LINC00543-201ENST00000567234 DDX19BQ9UMR2 479 aa29.64■■■□□ 2.33
LINC00543-201ENST00000567234 SLIT3O75094 1523 aa29.63■■■□□ 2.33
LINC00543-201ENST00000567234 CHL1O00533 1208 aa29.63■■■□□ 2.33
LINC00543-201ENST00000567234 HAP1P54257 671 aaPredicted RBP29.63■■■□□ 2.33
LINC00543-201ENST00000567234 DCTN1Q14203 1278 aa29.63■■■□□ 2.33
LINC00543-201ENST00000567234 NBR1Q14596 966 aa29.63■■■□□ 2.33
LINC00543-201ENST00000567234 ALS2Q96Q42 1657 aa29.63■■■□□ 2.33
LINC00543-201ENST00000567234 HTATSF1O43719 755 aaKnown RBP29.62■■■□□ 2.33
LINC00543-201ENST00000567234 IGHDP01880 384 aa29.62■■■□□ 2.33
LINC00543-201ENST00000567234 TWISTNBQ3B726 338 aaPredicted RBP29.62■■■□□ 2.33
LINC00543-201ENST00000567234 PXDNQ92626 1479 aa29.62■■■□□ 2.33
LINC00543-201ENST00000567234 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
LINC00543-201ENST00000567234 MTHFSDQ2M296 383 aaKnown RBP29.61■■■□□ 2.33
LINC00543-201ENST00000567234 LMOD2Q6P5Q4 547 aa29.61■■■□□ 2.33
LINC00543-201ENST00000567234 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
LINC00543-201ENST00000567234 MRPL50Q8N5N7 158 aaKnown RBP29.6■■■□□ 2.33
LINC00543-201ENST00000567234 TSPYL6Q8N831 410 aa29.6■■■□□ 2.33
LINC00543-201ENST00000567234 KIAA0232Q92628 1395 aa29.6■■■□□ 2.33
LINC00543-201ENST00000567234 CRB1P82279 1406 aa29.6■■■□□ 2.33
LINC00543-201ENST00000567234 PDE4AP27815 886 aa29.59■■■□□ 2.33
LINC00543-201ENST00000567234 BACH2Q9BYV9 841 aa29.59■■■□□ 2.33
LINC00543-201ENST00000567234 RTF1Q92541 710 aaKnown RBP29.58■■■□□ 2.33
LINC00543-201ENST00000567234 PCDHB15Q9Y5E8 787 aa29.58■■■□□ 2.33
LINC00543-201ENST00000567234 C8orf58Q8NAV2 365 aa29.57■■■□□ 2.32
LINC00543-201ENST00000567234 MCM10Q7L590 875 aa29.57■■■□□ 2.32
LINC00543-201ENST00000567234 USP19O94966 1318 aa29.56■■■□□ 2.32
LINC00543-201ENST00000567234 RWDD1Q9H446 243 aaPredicted RBP29.56■■■□□ 2.32
LINC00543-201ENST00000567234 ROBO1Q9Y6N7 1651 aa29.55■■■□□ 2.32
LINC00543-201ENST00000567234 LRRC37A3O60309 1634 aa29.55■■■□□ 2.32
LINC00543-201ENST00000567234 NHSL1Q5SYE7 1610 aa29.55■■■□□ 2.32
LINC00543-201ENST00000567234 ITPRIPQ8IWB1 547 aa29.54■■■□□ 2.32
LINC00543-201ENST00000567234 TMEM57Q8N5G2 664 aa29.53■■■□□ 2.32
LINC00543-201ENST00000567234 CHMP4BQ9H444 224 aaKnown RBP29.52■■■□□ 2.32
LINC00543-201ENST00000567234 GCP02774 474 aa29.52■■■□□ 2.32
LINC00543-201ENST00000567234 SKAP1Q86WV1 359 aa29.52■■■□□ 2.32
LINC00543-201ENST00000567234 TNS3Q68CZ2 1445 aa29.52■■■□□ 2.32
LINC00543-201ENST00000567234 ARHGEF25Q86VW2 580 aa29.51■■■□□ 2.31
LINC00543-201ENST00000567234 MED1Q15648 1581 aaPredicted RBP29.51■■■□□ 2.31
LINC00543-201ENST00000567234 GNAT3A8MTJ3 354 aa29.5■■■□□ 2.31
LINC00543-201ENST00000567234 ELL2O00472 640 aaPredicted RBP29.5■■■□□ 2.31
LINC00543-201ENST00000567234 SOS2Q07890 1332 aaPredicted RBP29.49■■■□□ 2.31
LINC00543-201ENST00000567234 SPATA31A3Q5VYP0 1347 aa29.49■■■□□ 2.31
LINC00543-201ENST00000567234 LTV1Q96GA3 475 aaPredicted RBP29.49■■■□□ 2.31
LINC00543-201ENST00000567234 ZBTB40Q9NUA8 1239 aa29.49■■■□□ 2.31
LINC00543-201ENST00000567234 HDAC1Q13547 482 aaPredicted RBP29.48■■■□□ 2.31
LINC00543-201ENST00000567234 API5Q9BZZ5 524 aaKnown RBP29.48■■■□□ 2.31
LINC00543-201ENST00000567234 MAP3K5Q99683 1374 aa29.47■■■□□ 2.31
LINC00543-201ENST00000567234 ABCC4O15439 1325 aa29.47■■■□□ 2.31
LINC00543-201ENST00000567234 BABAM1Q9NWV8 329 aa29.46■■■□□ 2.31
LINC00543-201ENST00000567234 CRYBG1Q9Y4K1 1723 aa29.45■■■□□ 2.3
LINC00543-201ENST00000567234 NCAPD2Q15021 1401 aa29.45■■■□□ 2.3
LINC00543-201ENST00000567234 RGPD2P0DJD1 1756 aa29.44■■■□□ 2.3
LINC00543-201ENST00000567234 CABLES1Q8TDN4 633 aa29.44■■■□□ 2.3
LINC00543-201ENST00000567234 RGS3P49796 1198 aa29.43■■■□□ 2.3
LINC00543-201ENST00000567234 FAM161AQ3B820 660 aa29.43■■■□□ 2.3
LINC00543-201ENST00000567234 NBPF6Q5VWK0 638 aa29.43■■■□□ 2.3
LINC00543-201ENST00000567234 NBPF4Q96M43 638 aa29.43■■■□□ 2.3
LINC00543-201ENST00000567234 TSPYL4Q9UJ04 414 aa29.43■■■□□ 2.3
LINC00543-201ENST00000567234 CAMTA1Q9Y6Y1 1673 aa29.42■■■□□ 2.3
LINC00543-201ENST00000567234 ZBTB7CA1YPR0 619 aa29.41■■■□□ 2.3
LINC00543-201ENST00000567234 DDRGK1Q96HY6 314 aa29.41■■■□□ 2.3
LINC00543-201ENST00000567234 SOS1Q07889 1333 aaPredicted RBP29.4■■■□□ 2.3
LINC00543-201ENST00000567234 VIRMAQ69YN4 1812 aaKnown RBP29.39■■■□□ 2.3
LINC00543-201ENST00000567234 ZBTB7BO15156 539 aaPredicted RBP29.38■■■□□ 2.29
LINC00543-201ENST00000567234 PIP4K2BP78356 416 aa29.38■■■□□ 2.29
LINC00543-201ENST00000567234 CACNA1FO60840 1977 aa29.38■■■□□ 2.29
LINC00543-201ENST00000567234 USHBP1Q8N6Y0 703 aa29.38■■■□□ 2.29
LINC00543-201ENST00000567234 AHDC1Q5TGY3 1603 aaPredicted RBP29.38■■■□□ 2.29
LINC00543-201ENST00000567234 PTPRCP08575 1304 aa29.37■■■□□ 2.29
LINC00543-201ENST00000567234 KRT24Q2M2I5 525 aa29.37■■■□□ 2.29
LINC00543-201ENST00000567234 LMO7Q8WWI1 1683 aa29.37■■■□□ 2.29
LINC00543-201ENST00000567234 IL17REQ8NFR9 667 aa29.36■■■□□ 2.29
LINC00543-201ENST00000567234 PDZRN3Q9UPQ7 1066 aa29.36■■■□□ 2.29
LINC00543-201ENST00000567234 TOM1O60784 492 aa29.35■■■□□ 2.29
LINC00543-201ENST00000567234 ZC3H6P61129 1189 aaKnown RBP29.35■■■□□ 2.29
LINC00543-201ENST00000567234 TAF7Q15545 349 aaPredicted RBP29.35■■■□□ 2.29
LINC00543-201ENST00000567234 C8orf34Q49A92 452 aa29.35■■■□□ 2.29
LINC00543-201ENST00000567234 CEMIPQ8WUJ3 1361 aa29.35■■■□□ 2.29
LINC00543-201ENST00000567234 UBAP1LF5GYI3 381 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 ANKRD24Q8TF21 1146 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 ABCA3Q99758 1704 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 AMOTQ4VCS5 1084 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 SMC5Q8IY18 1101 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 MIS18AQ9NYP9 233 aa29.34■■■□□ 2.29
LINC00543-201ENST00000567234 RGPD5Q99666 1765 aa29.33■■■□□ 2.29
LINC00543-201ENST00000567234 ABCC6O95255 1503 aa29.32■■■□□ 2.28
LINC00543-201ENST00000567234 PLEKHO1Q53GL0 409 aaPredicted RBP29.32■■■□□ 2.28
LINC00543-201ENST00000567234 INTS3Q68E01 1043 aaKnown RBP29.32■■■□□ 2.28
LINC00543-201ENST00000567234 PHLPP1O60346 1717 aa29.31■■■□□ 2.28
LINC00543-201ENST00000567234 CERKQ8TCT0 537 aa29.31■■■□□ 2.28
LINC00543-201ENST00000567234 RGS12O14924 1447 aa29.31■■■□□ 2.28
LINC00543-201ENST00000567234 LRRC59Q96AG4 307 aaKnown RBP29.31■■■□□ 2.28
LINC00543-201ENST00000567234 ANO8Q9HCE9 1232 aaPredicted RBP29.3■■■□□ 2.28
LINC00543-201ENST00000567234 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
LINC00543-201ENST00000567234 AXIN2Q9Y2T1 843 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms