RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ANKRD24Q8TF21 1146 aa7.25□□□□□ -1.25
CNOT1-211ENST00000567188 ZNF622Q969S3 477 aaKnown RBP eCLIP7.25□□□□□ -1.256e-7■□□□□ 9.1
CNOT1-211ENST00000567188 CHMP4CQ96CF2 233 aa7.25□□□□□ -1.25
CNOT1-211ENST00000567188 TATP17735 454 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-211ENST00000567188 SF3B2Q13435 895 aaKnown RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
CNOT1-211ENST00000567188 MPRIPQ6WCQ1 1025 aa7.24□□□□□ -1.25
CNOT1-211ENST00000567188 NOC3LQ8WTT2 800 aaKnown RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 CEP170BQ9Y4F5 1589 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 LEKR1Q6ZMV7 388 aa7.24□□□□□ -1.25
CNOT1-211ENST00000567188 MCM5P33992 734 aa7.24□□□□□ -1.25
CNOT1-211ENST00000567188 PRKRIP1Q9H875 184 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 IPO4Q8TEX9 1081 aaKnown RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 GZF1Q9H116 711 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-211ENST00000567188 ESPNB1AK53 854 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 BTG4Q9NY30 223 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 FGD1P98174 961 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 LMOD3Q0VAK6 560 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 CENPQQ7L2Z9 268 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-211ENST00000567188 CDR1P51861 262 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 TEFQ10587 303 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 KIAA1211Q6ZU35 1233 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 MAGI2Q86UL8 1455 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 CCDC191Q8NCU4 936 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 CLCN1P35523 988 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 FAM83GA6ND36 823 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 GIMAP7Q8NHV1 300 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 ROBO2Q9HCK4 1378 aa7.23□□□□□ -1.25
CNOT1-211ENST00000567188 BTBD11A6QL63 1104 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 CREBRFQ8IUR6 639 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 CDCA7LQ96GN5 454 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-211ENST00000567188 LRPPRCP42704 1394 aaKnown RBP7.22□□□□□ -1.25
CNOT1-211ENST00000567188 FAM98CQ17RN3 349 aaKnown RBP7.22□□□□□ -1.25
CNOT1-211ENST00000567188 ZNF692Q9BU19 519 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-211ENST00000567188 FBXO3Q9UK99 471 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 A0A1W2PP64 1363 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 DYNC1I1O14576 645 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 CCDC70Q6NSX1 233 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 SASS6Q6UVJ0 657 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 RUNDC1Q96C34 613 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 SLKQ9H2G2 1235 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-211ENST00000567188 A2ML1A8K2U0 1454 aa7.22□□□□□ -1.25
CNOT1-211ENST00000567188 HMMRO75330 724 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 HSP90B2PQ58FF3 399 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 TIGD1Q96MW7 591 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 SPINK5Q9NQ38 1064 aaPredicted RBP7.21□□□□□ -1.25
CNOT1-211ENST00000567188 PLEKHG1Q9ULL1 1385 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 SETSIPP0DME0 302 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 ZSCAN30Q86W11 494 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 TERF1P54274 439 aa7.21□□□□□ -1.25
CNOT1-211ENST00000567188 CCP110O43303 1012 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 TMEM94Q12767 1356 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 ATAD2Q6PL18 1390 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 ZNF710Q8N1W2 664 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 CCDC34Q96HJ3 373 aa7.21□□□□□ -1.26
CNOT1-211ENST00000567188 ZNF530Q6P9A1 599 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-211ENST00000567188 JARID2Q92833 1246 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-211ENST00000567188 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 GTF2E1P29083 439 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-211ENST00000567188 PLEKHO1Q53GL0 409 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-211ENST00000567188 DDX49Q9Y6V7 483 aaKnown RBP7.2□□□□□ -1.26
CNOT1-211ENST00000567188 PPLO60437 1756 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 PLCD4Q9BRC7 762 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 ATP6V1DQ9Y5K8 247 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 UQCRHLA0A096LP55 91 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 UQCRHP07919 91 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 STK31Q9BXU1 1019 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 CCDC61Q9Y6R9 512 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 TTC21BQ7Z4L5 1316 aa7.2□□□□□ -1.26
CNOT1-211ENST00000567188 PTCD1O75127 700 aaKnown RBP7.19□□□□□ -1.26
CNOT1-211ENST00000567188 SPRYD3Q8NCJ5 442 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 USP21Q9UK80 565 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 SLAIN2Q9P270 581 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 CCDC85AQ96PX6 553 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-211ENST00000567188 ZMYM4Q5VZL5 1548 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 NASPP49321 788 aaPredicted RBP7.19□□□□□ -1.26
CNOT1-211ENST00000567188 RIC3Q7Z5B4 369 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 GPATCH3Q96I76 525 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 PIK3C2GO75747 1445 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
CNOT1-211ENST00000567188 FAM193AP78312 1265 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 NINLQ9Y2I6 1382 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-211ENST00000567188 H0YHG0 523 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 HSP90AB2PQ58FF8 381 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 CARD14Q9BXL6 1004 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 INCENPQ9NQS7 918 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 ITSN1Q15811 1721 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 CADPS2Q86UW7 1296 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 CEP89Q96ST8 783 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 C19orf44Q9H6X5 657 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 UBR1Q8IWV7 1749 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 ZRSR2Q15696 482 aaKnown RBP7.18□□□□□ -1.26
CNOT1-211ENST00000567188 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 ASXL1Q8IXJ9 1541 aa7.18□□□□□ -1.26
CNOT1-211ENST00000567188 GTF2A1P52655 376 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-211ENST00000567188 TPM1P09493 284 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms