RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
COMMD4-214ENST00000566230 ANKRD36BQ8N2N9 1353 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
COMMD4-214ENST00000566230 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 POLD1P28340 1107 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 HOXC9P31274 260 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-214ENST00000566230 TFCP2L1Q9NZI6 479 aa18.94■□□□□ 0.62
COMMD4-214ENST00000566230 NLGN2Q8NFZ4 835 aa18.93■□□□□ 0.62
COMMD4-214ENST00000566230 ZCRB1Q8TBF4 217 aaKnown RBP18.92■□□□□ 0.62
COMMD4-214ENST00000566230 MEGF6O75095 1541 aa18.91■□□□□ 0.62
COMMD4-214ENST00000566230 COG3Q96JB2 828 aa18.91■□□□□ 0.62
COMMD4-214ENST00000566230 TESK2Q96S53 571 aa18.91■□□□□ 0.62
COMMD4-214ENST00000566230 AMPHP49418 695 aa18.9■□□□□ 0.62
COMMD4-214ENST00000566230 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
COMMD4-214ENST00000566230 CCNL1Q9UK58 526 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-214ENST00000566230 NBPF6Q5VWK0 638 aa18.88■□□□□ 0.61
COMMD4-214ENST00000566230 COL23A1Q86Y22 540 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-214ENST00000566230 NBPF4Q96M43 638 aa18.88■□□□□ 0.61
COMMD4-214ENST00000566230 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
COMMD4-214ENST00000566230 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
COMMD4-214ENST00000566230 RRS1Q15050 365 aaKnown RBP18.85■□□□□ 0.61
COMMD4-214ENST00000566230 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
COMMD4-214ENST00000566230 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
COMMD4-214ENST00000566230 USP47Q96K76 1375 aa18.84■□□□□ 0.61
COMMD4-214ENST00000566230 TAF1LQ8IZX4 1826 aa18.84■□□□□ 0.61
COMMD4-214ENST00000566230 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-214ENST00000566230 C5P01031 1676 aa18.84■□□□□ 0.61
COMMD4-214ENST00000566230 RTL1A6NKG5 1358 aa18.83■□□□□ 0.61
COMMD4-214ENST00000566230 FYB1O15117 783 aa18.83■□□□□ 0.6
COMMD4-214ENST00000566230 MSH5O43196 834 aa18.83■□□□□ 0.6
COMMD4-214ENST00000566230 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
COMMD4-214ENST00000566230 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
COMMD4-214ENST00000566230 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
COMMD4-214ENST00000566230 CEP350Q5VT06 3117 aa18.82■□□□□ 0.6
COMMD4-214ENST00000566230 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
COMMD4-214ENST00000566230 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
COMMD4-214ENST00000566230 ITGB4P16144 1822 aa18.8■□□□□ 0.6
COMMD4-214ENST00000566230 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
COMMD4-214ENST00000566230 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-214ENST00000566230 HSP90AB2PQ58FF8 381 aa18.78■□□□□ 0.6
COMMD4-214ENST00000566230 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
COMMD4-214ENST00000566230 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
COMMD4-214ENST00000566230 INSRP06213 1382 aa18.77■□□□□ 0.6
COMMD4-214ENST00000566230 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.59
COMMD4-214ENST00000566230 CYP27B1O15528 508 aa18.76■□□□□ 0.59
COMMD4-214ENST00000566230 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
COMMD4-214ENST00000566230 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
COMMD4-214ENST00000566230 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
COMMD4-214ENST00000566230 C4BP0C0L5 1744 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 AMIGO3Q86WK7 504 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
COMMD4-214ENST00000566230 ATP10DQ9P241 1426 aa18.74■□□□□ 0.59
COMMD4-214ENST00000566230 FLT4P35916 1363 aa18.73■□□□□ 0.59
COMMD4-214ENST00000566230 PKD1L3Q7Z443 1732 aa18.73■□□□□ 0.59
COMMD4-214ENST00000566230 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
COMMD4-214ENST00000566230 SMIM5Q71RC9 77 aa18.72■□□□□ 0.59
COMMD4-214ENST00000566230 KIF24Q5T7B8 1368 aa18.71■□□□□ 0.59
COMMD4-214ENST00000566230 TMF1P82094 1093 aa18.71■□□□□ 0.59
COMMD4-214ENST00000566230 PIGBQ92521 554 aa18.71■□□□□ 0.59
COMMD4-214ENST00000566230 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
COMMD4-214ENST00000566230 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-214ENST00000566230 ADCY9O60503 1353 aa18.69■□□□□ 0.58
COMMD4-214ENST00000566230 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-214ENST00000566230 AK7Q96M32 723 aa18.69■□□□□ 0.58
COMMD4-214ENST00000566230 CARD14Q9BXL6 1004 aa18.69■□□□□ 0.58
COMMD4-214ENST00000566230 EMILIN1Q9Y6C2 1016 aa18.69■□□□□ 0.58
COMMD4-214ENST00000566230 NCAPD2Q15021 1401 aa18.68■□□□□ 0.58
COMMD4-214ENST00000566230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.67■□□□□ 0.58
COMMD4-214ENST00000566230 PHF14O94880 888 aa18.67■□□□□ 0.58
COMMD4-214ENST00000566230 IFFO2Q5TF58 517 aa18.67■□□□□ 0.58
COMMD4-214ENST00000566230 GPBP1L1Q9HC44 474 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-214ENST00000566230 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
COMMD4-214ENST00000566230 WWC3Q9ULE0 1092 aa18.66■□□□□ 0.58
COMMD4-214ENST00000566230 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
COMMD4-214ENST00000566230 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
COMMD4-214ENST00000566230 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
COMMD4-214ENST00000566230 LOC102724428A0A0B4J2F2 783 aa18.64■□□□□ 0.57
COMMD4-214ENST00000566230 SSFA2P28290 1259 aa18.64■□□□□ 0.57
COMMD4-214ENST00000566230 SIK1P57059 783 aa18.64■□□□□ 0.57
COMMD4-214ENST00000566230 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-214ENST00000566230 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
COMMD4-214ENST00000566230 ITPK1Q13572 414 aa18.63■□□□□ 0.57
COMMD4-214ENST00000566230 EYA1Q99502 592 aa18.63■□□□□ 0.57
COMMD4-214ENST00000566230 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
COMMD4-214ENST00000566230 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
COMMD4-214ENST00000566230 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-214ENST00000566230 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
COMMD4-214ENST00000566230 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
COMMD4-214ENST00000566230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.61■□□□□ 0.57
COMMD4-214ENST00000566230 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
COMMD4-214ENST00000566230 HSPA6P17066 643 aa18.6■□□□□ 0.57
COMMD4-214ENST00000566230 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
COMMD4-214ENST00000566230 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
COMMD4-214ENST00000566230 KIAA1551Q9HCM1 1747 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms