RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 THRAP3Q9Y2W1 955 aaKnown RBP19.67■□□□□ 0.74
SPG7-213ENST00000566221 DISP2A7MBM2 1401 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
SPG7-213ENST00000566221 RGS12O14924 1447 aa19.66■□□□□ 0.74
SPG7-213ENST00000566221 RAPGEF4Q8WZA2 1011 aa19.65■□□□□ 0.74
SPG7-213ENST00000566221 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
SPG7-213ENST00000566221 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
SPG7-213ENST00000566221 NEFMP07197 916 aa19.63■□□□□ 0.73
SPG7-213ENST00000566221 IL2RBP14784 551 aa19.63■□□□□ 0.73
SPG7-213ENST00000566221 BARGINQ6ZT62 677 aa19.63■□□□□ 0.73
SPG7-213ENST00000566221 GJD4Q96KN9 370 aaPredicted RBP19.63■□□□□ 0.73
SPG7-213ENST00000566221 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
SPG7-213ENST00000566221 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
SPG7-213ENST00000566221 TATP17735 454 aaPredicted RBP19.62■□□□□ 0.73
SPG7-213ENST00000566221 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
SPG7-213ENST00000566221 TNS2Q63HR2 1409 aa19.6■□□□□ 0.73
SPG7-213ENST00000566221 BRWD3Q6RI45 1802 aa19.6■□□□□ 0.73
SPG7-213ENST00000566221 RUNDC1Q96C34 613 aa19.6■□□□□ 0.73
SPG7-213ENST00000566221 CCDC146Q8IYE0 955 aa19.59■□□□□ 0.73
SPG7-213ENST00000566221 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.72
SPG7-213ENST00000566221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.723e-9■■□□□ 13.2
SPG7-213ENST00000566221 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
SPG7-213ENST00000566221 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
SPG7-213ENST00000566221 SCN11AQ9UI33 1791 aa19.57■□□□□ 0.72
SPG7-213ENST00000566221 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
SPG7-213ENST00000566221 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
SPG7-213ENST00000566221 PHACTR3Q96KR7 559 aa19.55■□□□□ 0.72
SPG7-213ENST00000566221 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
SPG7-213ENST00000566221 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
SPG7-213ENST00000566221 A0A0G2JS52 829 aa19.54■□□□□ 0.72
SPG7-213ENST00000566221 MYT1Q01538 1121 aa19.54■□□□□ 0.72
SPG7-213ENST00000566221 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
SPG7-213ENST00000566221 ADAMTS7Q9UKP4 1686 aa19.54■□□□□ 0.72
SPG7-213ENST00000566221 ONECUT3O60422 494 aaPredicted RBP19.53■□□□□ 0.72
SPG7-213ENST00000566221 NFE2L2Q16236 605 aa19.52■□□□□ 0.72
SPG7-213ENST00000566221 DDB1Q16531 1140 aa19.52■□□□□ 0.72
SPG7-213ENST00000566221 MTHFSDQ2M296 383 aaKnown RBP19.52■□□□□ 0.72
SPG7-213ENST00000566221 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
SPG7-213ENST00000566221 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.71
SPG7-213ENST00000566221 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
SPG7-213ENST00000566221 EXOC5O00471 708 aa19.51■□□□□ 0.71
SPG7-213ENST00000566221 APAF1O14727 1248 aa19.51■□□□□ 0.71
SPG7-213ENST00000566221 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
SPG7-213ENST00000566221 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
SPG7-213ENST00000566221 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
SPG7-213ENST00000566221 C1orf141Q5JVX7 400 aa19.5■□□□□ 0.71
SPG7-213ENST00000566221 ITGB4P16144 1822 aa19.49■□□□□ 0.71
SPG7-213ENST00000566221 SEPT12Q8IYM1 358 aa19.49■□□□□ 0.71
SPG7-213ENST00000566221 SIPA1L3O60292 1781 aaPredicted RBP19.49■□□□□ 0.71
SPG7-213ENST00000566221 SBF2Q86WG5 1849 aa19.48■□□□□ 0.71
SPG7-213ENST00000566221 AKAP4Q5JQC9 854 aa19.48■□□□□ 0.71
SPG7-213ENST00000566221 CCDC125Q86Z20 511 aa19.48■□□□□ 0.71
SPG7-213ENST00000566221 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
SPG7-213ENST00000566221 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
SPG7-213ENST00000566221 GNAT3A8MTJ3 354 aa19.47■□□□□ 0.71
SPG7-213ENST00000566221 CYP27B1O15528 508 aa19.47■□□□□ 0.71
SPG7-213ENST00000566221 PHKG2P15735 406 aa19.47■□□□□ 0.71
SPG7-213ENST00000566221 LMOD3Q0VAK6 560 aa19.47■□□□□ 0.71
SPG7-213ENST00000566221 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
SPG7-213ENST00000566221 RRP7AQ9Y3A4 280 aaKnown RBP19.47■□□□□ 0.71
SPG7-213ENST00000566221 RIPK4P57078 832 aa19.46■□□□□ 0.71
SPG7-213ENST00000566221 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
SPG7-213ENST00000566221 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
SPG7-213ENST00000566221 HNRNPUQ00839 825 aaKnown RBP eCLIP19.45■□□□□ 0.7
SPG7-213ENST00000566221 PDE3BQ13370 1112 aa19.45■□□□□ 0.7
SPG7-213ENST00000566221 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
SPG7-213ENST00000566221 DDX54Q8TDD1 881 aaKnown RBP19.45■□□□□ 0.7
SPG7-213ENST00000566221 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
SPG7-213ENST00000566221 NHSQ6T4R5 1651 aa19.44■□□□□ 0.7
SPG7-213ENST00000566221 MRC1P22897 1456 aa19.44■□□□□ 0.7
SPG7-213ENST00000566221 RTF1Q92541 710 aaKnown RBP19.44■□□□□ 0.7
SPG7-213ENST00000566221 NKX1-1Q15270 411 aaPredicted RBP19.43■□□□□ 0.7
SPG7-213ENST00000566221 CCDC27Q2M243 656 aa19.43■□□□□ 0.7
SPG7-213ENST00000566221 DCAF5Q96JK2 942 aa19.43■□□□□ 0.7
SPG7-213ENST00000566221 MARCH10Q8NA82 808 aaPredicted RBP19.42■□□□□ 0.7
SPG7-213ENST00000566221 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
SPG7-213ENST00000566221 BCL9O00512 1426 aa19.42■□□□□ 0.7
SPG7-213ENST00000566221 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
SPG7-213ENST00000566221 KRT27Q7Z3Y8 459 aa19.41■□□□□ 0.7
SPG7-213ENST00000566221 TRIM35Q9UPQ4 493 aa19.41■□□□□ 0.7
SPG7-213ENST00000566221 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
SPG7-213ENST00000566221 PAPPAQ13219 1627 aa19.4■□□□□ 0.7
SPG7-213ENST00000566221 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.7
SPG7-213ENST00000566221 RNMTO43148 476 aaKnown RBP19.39■□□□□ 0.69
SPG7-213ENST00000566221 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
SPG7-213ENST00000566221 BTAF1O14981 1849 aa19.38■□□□□ 0.69
SPG7-213ENST00000566221 ZBED9Q6R2W3 1325 aa19.38■□□□□ 0.69
SPG7-213ENST00000566221 MCM10Q7L590 875 aa19.38■□□□□ 0.69
SPG7-213ENST00000566221 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
SPG7-213ENST00000566221 CALD1Q05682 793 aaKnown RBP19.37■□□□□ 0.69
SPG7-213ENST00000566221 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
SPG7-213ENST00000566221 IL17REQ8NFR9 667 aa19.37■□□□□ 0.69
SPG7-213ENST00000566221 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
SPG7-213ENST00000566221 ZNF521Q96K83 1311 aa19.36■□□□□ 0.69
SPG7-213ENST00000566221 ERVV-2B6SEH9 535 aa19.36■□□□□ 0.69
SPG7-213ENST00000566221 LGR6Q9HBX8 967 aa19.36■□□□□ 0.69
SPG7-213ENST00000566221 EP400Q96L91 3159 aa19.36■□□□□ 0.69
SPG7-213ENST00000566221 UBR2Q8IWV8 1755 aa19.36■□□□□ 0.69
SPG7-213ENST00000566221 TEFQ10587 303 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms