RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ZSWIM4Q9H7M6 989 aa13.93□□□□□ -0.18
UBFD1-205ENST00000566136 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
UBFD1-205ENST00000566136 MRPL42Q9Y6G3 142 aaKnown RBP13.93□□□□□ -0.18
UBFD1-205ENST00000566136 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 TBC1D9Q6ZT07 1266 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 PRR7Q8TB68 274 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
UBFD1-205ENST00000566136 ZFYVE27Q5T4F4 411 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 ANO2Q9NQ90 1003 aa13.92□□□□□ -0.18
UBFD1-205ENST00000566136 GGT6Q6P531 493 aa13.91□□□□□ -0.18
UBFD1-205ENST00000566136 HMX1Q9NP08 348 aaPredicted RBP13.91□□□□□ -0.18
UBFD1-205ENST00000566136 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
UBFD1-205ENST00000566136 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
UBFD1-205ENST00000566136 KIF4AO95239 1232 aa13.91□□□□□ -0.18
UBFD1-205ENST00000566136 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
UBFD1-205ENST00000566136 SH3BP5O60239 455 aa13.9□□□□□ -0.18
UBFD1-205ENST00000566136 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
UBFD1-205ENST00000566136 PTGDRQ13258 359 aa13.9□□□□□ -0.18
UBFD1-205ENST00000566136 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
UBFD1-205ENST00000566136 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
UBFD1-205ENST00000566136 AP1G2O75843 785 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 FCHSD2O94868 740 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 TINF2Q9BSI4 451 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 ANP32CO43423 234 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
UBFD1-205ENST00000566136 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 ANKRD30BQ9BXX2 1392 aa13.89□□□□□ -0.19
UBFD1-205ENST00000566136 BMS1Q14692 1282 aaKnown RBP13.88□□□□□ -0.19
UBFD1-205ENST00000566136 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
UBFD1-205ENST00000566136 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
UBFD1-205ENST00000566136 CLTCQ00610 1675 aaKnown RBP13.87□□□□□ -0.19
UBFD1-205ENST00000566136 CLCN1P35523 988 aa13.87□□□□□ -0.19
UBFD1-205ENST00000566136 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
UBFD1-205ENST00000566136 STRCQ7RTU9 1775 aa13.87□□□□□ -0.19
UBFD1-205ENST00000566136 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
UBFD1-205ENST00000566136 MROH2AA6NES4 1674 aa13.86□□□□□ -0.19
UBFD1-205ENST00000566136 CROCC2H7BZ55 1655 aa13.86□□□□□ -0.19
UBFD1-205ENST00000566136 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
UBFD1-205ENST00000566136 DNAJA1P31689 397 aaKnown RBP13.86□□□□□ -0.19
UBFD1-205ENST00000566136 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
UBFD1-205ENST00000566136 PZPP20742 1482 aa13.85□□□□□ -0.19
UBFD1-205ENST00000566136 ERCC3P19447 782 aa13.85□□□□□ -0.19
UBFD1-205ENST00000566136 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
UBFD1-205ENST00000566136 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
UBFD1-205ENST00000566136 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
UBFD1-205ENST00000566136 DSG2Q14126 1118 aa13.85□□□□□ -0.19
UBFD1-205ENST00000566136 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
UBFD1-205ENST00000566136 KIF3BO15066 747 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 VAMP1P23763 118 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 APLP1P51693 650 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 MCCD1P59942 119 aaPredicted RBP13.84□□□□□ -0.19
UBFD1-205ENST00000566136 SSFA2P28290 1259 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 NPATQ14207 1427 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 CDHR5Q9HBB8 845 aa13.84□□□□□ -0.19
UBFD1-205ENST00000566136 EIF4G2P78344 907 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBFD1-205ENST00000566136 ALG2Q9H553 416 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 ANKRD30AQ9BXX3 1397 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 CERKQ8TCT0 537 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 ACBD3Q9H3P7 528 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 ADGRL2O95490 1459 aa13.83□□□□□ -0.2
UBFD1-205ENST00000566136 ARHGEF5Q12774 1597 aa13.82□□□□□ -0.2
UBFD1-205ENST00000566136 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
UBFD1-205ENST00000566136 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
UBFD1-205ENST00000566136 USP17L8P0C7I0 530 aa13.81□□□□□ -0.2
UBFD1-205ENST00000566136 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
UBFD1-205ENST00000566136 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
UBFD1-205ENST00000566136 COL4A3BPQ9Y5P4 624 aa13.81□□□□□ -0.2
UBFD1-205ENST00000566136 PLEKHG6Q3KR16 790 aa13.81□□□□□ -0.2
UBFD1-205ENST00000566136 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
UBFD1-205ENST00000566136 ANKRD50Q9ULJ7 1429 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 TBX4P57082 545 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 EVA1CP58658 441 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 TMEM259Q4ZIN3 620 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 FMNL3Q8IVF7 1028 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 TMX4Q9H1E5 349 aaPredicted RBP13.8□□□□□ -0.2
UBFD1-205ENST00000566136 NOP58Q9Y2X3 529 aaKnown RBP13.8□□□□□ -0.2
UBFD1-205ENST00000566136 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
UBFD1-205ENST00000566136 SECISBP2LQ93073 1101 aaKnown RBP13.79□□□□□ -0.2
UBFD1-205ENST00000566136 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
UBFD1-205ENST00000566136 HOXA2O43364 376 aa13.79□□□□□ -0.2
UBFD1-205ENST00000566136 CAMSAP1Q5T5Y3 1602 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 CCDC189A1A4V9 331 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
UBFD1-205ENST00000566136 TSHZ1Q6ZSZ6 1077 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 METTL16Q86W50 562 aaKnown RBP13.78□□□□□ -0.2
UBFD1-205ENST00000566136 RAVER1Q8IY67 606 aaKnown RBP13.78□□□□□ -0.2
UBFD1-205ENST00000566136 EPS8L1Q8TE68 723 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms