RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 HMGB1P1B2RPK0 211 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 TRIM66O15016 1216 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 DEKP35659 375 aaKnown RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 E2F4Q16254 413 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 CCDC18Q5T9S5 1454 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 PNPLA6Q8IY17 1366 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 HOXB3P14651 431 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 DSG2Q14126 1118 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 APBB1IPQ7Z5R6 666 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 FNBP4Q8N3X1 1017 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 METRNQ9UJH8 293 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 SPDYE16A6NNV3 312 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 THEMISQ8N1K5 641 aaPredicted RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 SREK1Q8WXA9 508 aaKnown RBP4.06□□□□□ -1.76
CHD9-216ENST00000565803 AMOTL2Q9Y2J4 779 aa4.06□□□□□ -1.76
CHD9-216ENST00000565803 MBD5Q9P267 1494 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 RAB11FIP3O75154 756 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 MYOM1P52179 1685 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 ARHGEF28Q8N1W1 1705 aaKnown RBP4.05□□□□□ -1.76
CHD9-216ENST00000565803 ONECUT3O60422 494 aaPredicted RBP4.05□□□□□ -1.76
CHD9-216ENST00000565803 PIP4K2BP78356 416 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 TSR1Q2NL82 804 aaKnown RBP4.05□□□□□ -1.76
CHD9-216ENST00000565803 PPP1R15BQ5SWA1 713 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 SPTY2D1Q68D10 685 aaPredicted RBP4.05□□□□□ -1.76
CHD9-216ENST00000565803 VTI1AQ96AJ9 217 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 DDX27Q96GQ7 796 aaKnown RBP4.05□□□□□ -1.76
CHD9-216ENST00000565803 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.05□□□□□ -1.76
CHD9-216ENST00000565803 PEAK1Q9H792 1746 aa4.05□□□□□ -1.76
CHD9-216ENST00000565803 KCNA6P17658 529 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 YY1P25490 414 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 ZNF662Q6ZS27 426 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 NAP1L2Q9ULW6 460 aaPredicted RBP4.04□□□□□ -1.76
CHD9-216ENST00000565803 FAM43BQ6ZT52 329 aaPredicted RBP4.04□□□□□ -1.76
CHD9-216ENST00000565803 ZSWIM6Q9HCJ5 1215 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 ZFYVE9O95405 1425 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 TCF3P15923 654 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 MCCP23508 829 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 FAM193AP78312 1265 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 RALBP1Q15311 655 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 CDCA8Q53HL2 280 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 WDR78Q5VTH9 848 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 DHX29Q7Z478 1369 aaKnown RBP4.04□□□□□ -1.76
CHD9-216ENST00000565803 C10orf71Q711Q0 1435 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 PAPPAQ13219 1627 aa4.04□□□□□ -1.76
CHD9-216ENST00000565803 KIF1AQ12756 1690 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 TRPM2O94759 1503 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 MAFGO15525 162 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 MCM6Q14566 821 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 NGLY1Q96IV0 654 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 QRICH2Q9H0J4 1663 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 CLIP1P30622 1438 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 TMEM94Q12767 1356 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.03□□□□□ -1.76
CHD9-216ENST00000565803 ANP32CO43423 234 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 TMTC2Q8N394 836 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 GIPC2Q8TF65 315 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 NRXN3Q9Y4C0 1643 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 FYCO1Q9BQS8 1478 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 C2orf72A6NCS6 295 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 TTC13Q8NBP0 860 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 KCNH8Q96L42 1107 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 NRKQ7Z2Y5 1582 aa4.03□□□□□ -1.76
CHD9-216ENST00000565803 MST1RQ04912 1400 aa4.03□□□□□ -1.77
CHD9-216ENST00000565803 WNK3Q9BYP7 1800 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 MORC4Q8TE76 937 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 BCL2L13Q9BXK5 485 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 ADCY9O60503 1353 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 TRPM1Q7Z4N2 1603 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 hCG_2014768A0A024R1R8 64 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 GIMAP6Q6P9H5 292 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 SND1Q7KZF4 910 aaKnown RBP eCLIP4.02□□□□□ -1.77
CHD9-216ENST00000565803 KLHL42Q9P2K6 505 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 PNMA2Q9UL42 364 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 MSH6P52701 1360 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 MAP4K4O95819 1239 aaPredicted RBP4.02□□□□□ -1.77
CHD9-216ENST00000565803 IBSPP21815 317 aaPredicted RBP4.02□□□□□ -1.77
CHD9-216ENST00000565803 LMOD3Q0VAK6 560 aa4.02□□□□□ -1.77
CHD9-216ENST00000565803 AFF2P51816 1311 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 PLEKHG1Q9ULL1 1385 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 KIF4AO95239 1232 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 ABL2P42684 1182 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 TERF2IPQ9NYB0 399 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 G3BP2Q9UN86 482 aaKnown RBP4.01□□□□□ -1.77
CHD9-216ENST00000565803 THSD7BQ9C0I4 1608 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 PPP1R15AO75807 674 aaPredicted RBP4.01□□□□□ -1.77
CHD9-216ENST00000565803 PRIM1P49642 420 aaKnown RBP4.01□□□□□ -1.77
CHD9-216ENST00000565803 IGBP1P78318 339 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 SKIV2LQ15477 1246 aaKnown RBP4.01□□□□□ -1.77
CHD9-216ENST00000565803 GABBR1Q9UBS5 961 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 PARP4Q9UKK3 1724 aaKnown RBP4.01□□□□□ -1.77
CHD9-216ENST00000565803 TMEM2Q9UHN6 1383 aa4.01□□□□□ -1.77
CHD9-216ENST00000565803 PLEKHG3A1L390 1219 aa4□□□□□ -1.77
CHD9-216ENST00000565803 WDHD1O75717 1129 aaPredicted RBP4□□□□□ -1.77
CHD9-216ENST00000565803 PLCG2P16885 1265 aa4□□□□□ -1.77
CHD9-216ENST00000565803 KCNA1Q09470 495 aa4□□□□□ -1.77
CHD9-216ENST00000565803 JMYQ8N9B5 988 aa4□□□□□ -1.77
CHD9-216ENST00000565803 ZNF784Q8NCA9 323 aaPredicted RBP4□□□□□ -1.77
CHD9-216ENST00000565803 SPOCK3Q9BQ16 436 aa4□□□□□ -1.77
CHD9-216ENST00000565803 TMUB1Q9BVT8 246 aa4□□□□□ -1.77
CHD9-216ENST00000565803 PLSCR2Q9NRY7 297 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms