RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 PNPLA7Q6ZV29 1317 aa16.28■□□□□ 0.2
NSMCE1-209ENST00000565384 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-209ENST00000565384 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
NSMCE1-209ENST00000565384 KCNQ4P56696 695 aa16.27■□□□□ 0.2
NSMCE1-209ENST00000565384 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
NSMCE1-209ENST00000565384 SLC16A10Q8TF71 515 aa16.27■□□□□ 0.2
NSMCE1-209ENST00000565384 LY75O60449 1722 aa16.27■□□□□ 0.19
NSMCE1-209ENST00000565384 TFCP2L1Q9NZI6 479 aa16.26■□□□□ 0.19
NSMCE1-209ENST00000565384 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
NSMCE1-209ENST00000565384 COL24A1Q17RW2 1714 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 POLD1P28340 1107 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 TMF1P82094 1093 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
NSMCE1-209ENST00000565384 FYB1O15117 783 aa16.24■□□□□ 0.19
NSMCE1-209ENST00000565384 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
NSMCE1-209ENST00000565384 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
NSMCE1-209ENST00000565384 USP47Q96K76 1375 aa16.24■□□□□ 0.19
NSMCE1-209ENST00000565384 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
NSMCE1-209ENST00000565384 CHD4Q14839 1912 aa16.23■□□□□ 0.19
NSMCE1-209ENST00000565384 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
NSMCE1-209ENST00000565384 GPR162Q16538 588 aa16.22■□□□□ 0.19
NSMCE1-209ENST00000565384 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
NSMCE1-209ENST00000565384 KIF20BQ96Q89 1820 aa16.22■□□□□ 0.19
NSMCE1-209ENST00000565384 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
NSMCE1-209ENST00000565384 INSRP06213 1382 aa16.2■□□□□ 0.18
NSMCE1-209ENST00000565384 FLT4P35916 1363 aa16.2■□□□□ 0.18
NSMCE1-209ENST00000565384 UTRNP46939 3433 aa16.2■□□□□ 0.18
NSMCE1-209ENST00000565384 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
NSMCE1-209ENST00000565384 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
NSMCE1-209ENST00000565384 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
NSMCE1-209ENST00000565384 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
NSMCE1-209ENST00000565384 MSH5O43196 834 aa16.18■□□□□ 0.18
NSMCE1-209ENST00000565384 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
NSMCE1-209ENST00000565384 NLGN2Q8NFZ4 835 aa16.18■□□□□ 0.18
NSMCE1-209ENST00000565384 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
NSMCE1-209ENST00000565384 COL23A1Q86Y22 540 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-209ENST00000565384 C5P01031 1676 aa16.17■□□□□ 0.18
NSMCE1-209ENST00000565384 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
NSMCE1-209ENST00000565384 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
NSMCE1-209ENST00000565384 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
NSMCE1-209ENST00000565384 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
NSMCE1-209ENST00000565384 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
NSMCE1-209ENST00000565384 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
NSMCE1-209ENST00000565384 EMILIN1Q9Y6C2 1016 aa16.14■□□□□ 0.17
NSMCE1-209ENST00000565384 CYP27B1O15528 508 aa16.13■□□□□ 0.17
NSMCE1-209ENST00000565384 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
NSMCE1-209ENST00000565384 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
NSMCE1-209ENST00000565384 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
NSMCE1-209ENST00000565384 HMGB2P26583 209 aaKnown RBP16.12■□□□□ 0.17
NSMCE1-209ENST00000565384 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
NSMCE1-209ENST00000565384 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
NSMCE1-209ENST00000565384 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.172e-10■□□□□ 9.6
NSMCE1-209ENST00000565384 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
NSMCE1-209ENST00000565384 ANKRD26Q9UPS8 1709 aa16.11■□□□□ 0.17
NSMCE1-209ENST00000565384 ITGB4P16144 1822 aa16.1■□□□□ 0.17
NSMCE1-209ENST00000565384 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
NSMCE1-209ENST00000565384 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
NSMCE1-209ENST00000565384 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
NSMCE1-209ENST00000565384 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
NSMCE1-209ENST00000565384 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
NSMCE1-209ENST00000565384 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
NSMCE1-209ENST00000565384 AK7Q96M32 723 aa16.08■□□□□ 0.16
NSMCE1-209ENST00000565384 SPG7Q9UQ90 795 aa16.08■□□□□ 0.16
NSMCE1-209ENST00000565384 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
NSMCE1-209ENST00000565384 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
NSMCE1-209ENST00000565384 AMIGO3Q86WK7 504 aa16.07■□□□□ 0.16
NSMCE1-209ENST00000565384 PIGBQ92521 554 aa16.07■□□□□ 0.16
NSMCE1-209ENST00000565384 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
NSMCE1-209ENST00000565384 PHF14O94880 888 aa16.06■□□□□ 0.16
NSMCE1-209ENST00000565384 EYA1Q99502 592 aa16.06■□□□□ 0.16
NSMCE1-209ENST00000565384 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
NSMCE1-209ENST00000565384 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-209ENST00000565384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 SIK1P57059 783 aa16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
NSMCE1-209ENST00000565384 LINC00116Q8NCU8 138 aa16.03■□□□□ 0.16
NSMCE1-209ENST00000565384 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
NSMCE1-209ENST00000565384 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
NSMCE1-209ENST00000565384 PHKG2P15735 406 aa16.02■□□□□ 0.16
NSMCE1-209ENST00000565384 SSFA2P28290 1259 aa16.02■□□□□ 0.16
NSMCE1-209ENST00000565384 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.16
NSMCE1-209ENST00000565384 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
NSMCE1-209ENST00000565384 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
NSMCE1-209ENST00000565384 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
NSMCE1-209ENST00000565384 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
NSMCE1-209ENST00000565384 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
NSMCE1-209ENST00000565384 ATP6V1AP38606 617 aa16■□□□□ 0.15
NSMCE1-209ENST00000565384 ITPK1Q13572 414 aa16■□□□□ 0.15
NSMCE1-209ENST00000565384 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
NSMCE1-209ENST00000565384 GNPATO15228 680 aa15.99■□□□□ 0.15
NSMCE1-209ENST00000565384 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-209ENST00000565384 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
NSMCE1-209ENST00000565384 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
NSMCE1-209ENST00000565384 ADCY9O60503 1353 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms