RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 USHBP1Q8N6Y0 703 aa35.07■■■■□ 3.2
NME3-208ENST00000565379 HSP90AB2PQ58FF8 381 aa35.06■■■■□ 3.2
NME3-208ENST00000565379 MEGF6O75095 1541 aa35.06■■■■□ 3.2
NME3-208ENST00000565379 NHSQ6T4R5 1651 aa35.05■■■■□ 3.2
NME3-208ENST00000565379 NBPF6Q5VWK0 638 aa35.05■■■■□ 3.2
NME3-208ENST00000565379 NBPF4Q96M43 638 aa35.05■■■■□ 3.2
NME3-208ENST00000565379 ANO8Q9HCE9 1232 aaPredicted RBP35.05■■■■□ 3.2
NME3-208ENST00000565379 CNGB1Q14028 1251 aaPredicted RBP35.04■■■■□ 3.2
NME3-208ENST00000565379 POLKQ9UBT6 870 aa35.04■■■■□ 3.2
NME3-208ENST00000565379 EMILIN1Q9Y6C2 1016 aa35.04■■■■□ 3.2
NME3-208ENST00000565379 DDX54Q8TDD1 881 aaKnown RBP35.01■■■■□ 3.2
NME3-208ENST00000565379 FLT4P35916 1363 aa35■■■■□ 3.19
NME3-208ENST00000565379 SMG6Q86US8 1419 aaKnown RBP35■■■■□ 3.19
NME3-208ENST00000565379 SPON1Q9HCB6 807 aa35■■■■□ 3.19
NME3-208ENST00000565379 SHANK3Q9BYB0 1731 aa34.99■■■■□ 3.19
NME3-208ENST00000565379 KAT6BQ8WYB5 2073 aa34.99■■■■□ 3.19
NME3-208ENST00000565379 INSRP06213 1382 aa34.98■■■■□ 3.19
NME3-208ENST00000565379 ANP32CO43423 234 aa34.96■■■■□ 3.19
NME3-208ENST00000565379 TXNRD1Q16881 649 aa34.96■■■■□ 3.19
NME3-208ENST00000565379 PRKRIP1Q9H875 184 aaPredicted RBP34.96■■■■□ 3.19
NME3-208ENST00000565379 MAP2P11137 1827 aaKnown RBP34.96■■■■□ 3.19
NME3-208ENST00000565379 BTAF1O14981 1849 aa34.95■■■■□ 3.19
NME3-208ENST00000565379 PPM1GO15355 546 aaPredicted RBP34.95■■■■□ 3.19
NME3-208ENST00000565379 PPP2R1AP30153 589 aa34.95■■■■□ 3.19
NME3-208ENST00000565379 MTHFSP49914 203 aa34.93■■■■□ 3.18
NME3-208ENST00000565379 PDGFDQ9GZP0 370 aaPredicted RBP34.92■■■■□ 3.18
NME3-208ENST00000565379 PPP1R1BQ9UD71 204 aaPredicted RBP34.91■■■■□ 3.18
NME3-208ENST00000565379 MYBBP1AQ9BQG0 1328 aaKnown RBP34.9■■■■□ 3.18
NME3-208ENST00000565379 ZCRB1Q8TBF4 217 aaKnown RBP34.9■■■■□ 3.18
NME3-208ENST00000565379 DOT1LQ8TEK3 1739 aa34.87■■■■□ 3.17
NME3-208ENST00000565379 CFAP53Q96M91 514 aa34.87■■■■□ 3.17
NME3-208ENST00000565379 RAPGEF4Q8WZA2 1011 aa34.84■■■■□ 3.17
NME3-208ENST00000565379 CASZ1Q86V15 1759 aa34.84■■■■□ 3.17
NME3-208ENST00000565379 PRIM1P49642 420 aaKnown RBP34.83■■■■□ 3.17
NME3-208ENST00000565379 DIEXFQ68CQ4 756 aaKnown RBP34.83■■■■□ 3.17
NME3-208ENST00000565379 SYTL4Q96C24 671 aaPredicted RBP34.82■■■■□ 3.16
NME3-208ENST00000565379 TATP17735 454 aaPredicted RBP34.81■■■■□ 3.16
NME3-208ENST00000565379 LRRC4BQ9NT99 713 aa34.81■■■■□ 3.16
NME3-208ENST00000565379 PAPPAQ13219 1627 aa34.81■■■■□ 3.16
NME3-208ENST00000565379 STK32BQ9NY57 414 aa34.8■■■■□ 3.16
NME3-208ENST00000565379 NCAPD2Q15021 1401 aa34.79■■■■□ 3.16
NME3-208ENST00000565379 DCAF8L1A6NGE4 600 aa34.77■■■■□ 3.16
NME3-208ENST00000565379 KCNQ4P56696 695 aa34.77■■■■□ 3.16
NME3-208ENST00000565379 SLC15A2Q16348 729 aa34.77■■■■□ 3.16
NME3-208ENST00000565379 DIAPH1O60610 1272 aaKnown RBP34.76■■■■□ 3.16
NME3-208ENST00000565379 EIF4A2Q14240 407 aaKnown RBP34.76■■■■□ 3.16
NME3-208ENST00000565379 EYA1Q99502 592 aa34.76■■■■□ 3.16
NME3-208ENST00000565379 ZNF827Q17R98 1081 aa34.75■■■■□ 3.15
NME3-208ENST00000565379 CYP27B1O15528 508 aa34.74■■■■□ 3.15
NME3-208ENST00000565379 ZBTB7AO95365 584 aa34.74■■■■□ 3.15
NME3-208ENST00000565379 IL13P35225 146 aa34.73■■■■□ 3.15
NME3-208ENST00000565379 NUDCQ9Y266 331 aa34.71■■■■□ 3.15
NME3-208ENST00000565379 PKD1L3Q7Z443 1732 aa34.71■■■■□ 3.15
NME3-208ENST00000565379 COL3A1P02461 1466 aaPredicted RBP34.71■■■■□ 3.15
NME3-208ENST00000565379 PCDH11XQ9BZA7 1347 aa34.7■■■■□ 3.15
NME3-208ENST00000565379 PCDH11YQ9BZA8 1340 aa34.7■■■■□ 3.15
NME3-208ENST00000565379 TOGARAM1Q9Y4F4 1720 aa34.69■■■■□ 3.14
NME3-208ENST00000565379 YY1P25490 414 aa34.68■■■■□ 3.14
NME3-208ENST00000565379 ATF5Q9Y2D1 282 aaPredicted RBP34.68■■■■□ 3.14
NME3-208ENST00000565379 PTGER2P43116 358 aa34.67■■■■□ 3.14
NME3-208ENST00000565379 IGSF1Q8N6C5 1336 aa34.65■■■■□ 3.14
NME3-208ENST00000565379 LY75O60449 1722 aa34.65■■■■□ 3.14
NME3-208ENST00000565379 AKT1S1Q96B36 256 aa34.63■■■■□ 3.13
NME3-208ENST00000565379 MTFR1LQ9H019 292 aa34.63■■■■□ 3.13
NME3-208ENST00000565379 SLC27A3Q5K4L6 730 aa34.61■■■■□ 3.13
NME3-208ENST00000565379 TUBGCP6Q96RT7 1819 aa34.58■■■■□ 3.13
NME3-208ENST00000565379 U2SURPO15042 1029 aaKnown RBP34.58■■■■□ 3.13
NME3-208ENST00000565379 MPRIPQ6WCQ1 1025 aa34.58■■■■□ 3.13
NME3-208ENST00000565379 PLEKHG2Q9H7P9 1386 aa34.58■■■■□ 3.13
NME3-208ENST00000565379 CCNL1Q9UK58 526 aaPredicted RBP34.57■■■■□ 3.12
NME3-208ENST00000565379 ITGB4P16144 1822 aa34.57■■■■□ 3.12
NME3-208ENST00000565379 SPG7Q9UQ90 795 aa34.56■■■■□ 3.12
NME3-208ENST00000565379 KDRP35968 1356 aa34.56■■■■□ 3.12
NME3-208ENST00000565379 SGIP1Q9BQI5 828 aa34.55■■■■□ 3.12
NME3-208ENST00000565379 CCER2I3L3R5 266 aa34.54■■■■□ 3.12
NME3-208ENST00000565379 SULT6B1Q6IMI4 303 aa34.54■■■■□ 3.12
NME3-208ENST00000565379 AEBP1Q8IUX7 1158 aa34.54■■■■□ 3.12
NME3-208ENST00000565379 NKX1-1Q15270 411 aaPredicted RBP34.53■■■■□ 3.12
NME3-208ENST00000565379 SYT17Q9BSW7 474 aa34.53■■■■□ 3.12
NME3-208ENST00000565379 PNPLA7Q6ZV29 1317 aa34.53■■■■□ 3.12
NME3-208ENST00000565379 U2AF1L5P0DN76 240 aaPredicted RBP34.52■■■■□ 3.12
NME3-208ENST00000565379 U2AF1Q01081 240 aaKnown RBP eCLIP34.52■■■■□ 3.12
NME3-208ENST00000565379 FHDC1Q9C0D6 1143 aaPredicted RBP34.52■■■■□ 3.12
NME3-208ENST00000565379 MRS2Q9HD23 443 aa34.52■■■■□ 3.12
NME3-208ENST00000565379 PALLDQ8WX93 1383 aa34.51■■■■□ 3.12
NME3-208ENST00000565379 PHKG2P15735 406 aa34.51■■■■□ 3.12
NME3-208ENST00000565379 PIGBQ92521 554 aa34.51■■■■□ 3.12
NME3-208ENST00000565379 WDR43Q15061 677 aaKnown RBP eCLIP34.5■■■■□ 3.11
NME3-208ENST00000565379 PNNQ9H307 717 aaKnown RBP34.5■■■■□ 3.11
NME3-208ENST00000565379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.5■■■■□ 3.11
NME3-208ENST00000565379 FCHSD2O94868 740 aa34.49■■■■□ 3.11
NME3-208ENST00000565379 QSER1Q2KHR3 1735 aa34.48■■■■□ 3.11
NME3-208ENST00000565379 TFCP2L1Q9NZI6 479 aa34.48■■■■□ 3.11
NME3-208ENST00000565379 ARXQ96QS3 562 aa34.47■■■■□ 3.11
NME3-208ENST00000565379 HMOX1P09601 288 aa34.46■■■■□ 3.11
NME3-208ENST00000565379 IFNL2Q8IZJ0 200 aa34.46■■■■□ 3.11
NME3-208ENST00000565379 C5P01031 1676 aa34.44■■■■□ 3.1
NME3-208ENST00000565379 MIER1Q8N108 512 aa34.44■■■■□ 3.1
NME3-208ENST00000565379 SLC16A10Q8TF71 515 aa34.44■■■■□ 3.1
NME3-208ENST00000565379 AMOTQ4VCS5 1084 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms