RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
SPG7-211ENST00000565370 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
SPG7-211ENST00000565370 BTAF1O14981 1849 aa16.79■□□□□ 0.28
SPG7-211ENST00000565370 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
SPG7-211ENST00000565370 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
SPG7-211ENST00000565370 PLSCR1O15162 318 aa16.78■□□□□ 0.28
SPG7-211ENST00000565370 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
SPG7-211ENST00000565370 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
SPG7-211ENST00000565370 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
SPG7-211ENST00000565370 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
SPG7-211ENST00000565370 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
SPG7-211ENST00000565370 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
SPG7-211ENST00000565370 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
SPG7-211ENST00000565370 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
SPG7-211ENST00000565370 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
SPG7-211ENST00000565370 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
SPG7-211ENST00000565370 KCNQ2O43526 872 aa16.72■□□□□ 0.27
SPG7-211ENST00000565370 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
SPG7-211ENST00000565370 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
SPG7-211ENST00000565370 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
SPG7-211ENST00000565370 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
SPG7-211ENST00000565370 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
SPG7-211ENST00000565370 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
SPG7-211ENST00000565370 TXNRD1Q16881 649 aa16.7■□□□□ 0.26
SPG7-211ENST00000565370 EYA1Q99502 592 aa16.7■□□□□ 0.26
SPG7-211ENST00000565370 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
SPG7-211ENST00000565370 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
SPG7-211ENST00000565370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.263e-9■■□□□ 13.2
SPG7-211ENST00000565370 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
SPG7-211ENST00000565370 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
SPG7-211ENST00000565370 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
SPG7-211ENST00000565370 LY75O60449 1722 aa16.67■□□□□ 0.26
SPG7-211ENST00000565370 PRIM1P49642 420 aaKnown RBP16.66■□□□□ 0.26
SPG7-211ENST00000565370 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
SPG7-211ENST00000565370 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
SPG7-211ENST00000565370 YY1P25490 414 aa16.65■□□□□ 0.26
SPG7-211ENST00000565370 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
SPG7-211ENST00000565370 ITGB4P16144 1822 aa16.64■□□□□ 0.25
SPG7-211ENST00000565370 CYP27B1O15528 508 aa16.64■□□□□ 0.25
SPG7-211ENST00000565370 PROM2Q8N271 834 aa16.63■□□□□ 0.25
SPG7-211ENST00000565370 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
SPG7-211ENST00000565370 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
SPG7-211ENST00000565370 KDRP35968 1356 aa16.62■□□□□ 0.25
SPG7-211ENST00000565370 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
SPG7-211ENST00000565370 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
SPG7-211ENST00000565370 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
SPG7-211ENST00000565370 MTHFSP49914 203 aa16.61■□□□□ 0.25
SPG7-211ENST00000565370 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
SPG7-211ENST00000565370 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
SPG7-211ENST00000565370 C5P01031 1676 aa16.6■□□□□ 0.25
SPG7-211ENST00000565370 PHKG2P15735 406 aa16.6■□□□□ 0.25
SPG7-211ENST00000565370 NKX1-1Q15270 411 aaPredicted RBP16.6■□□□□ 0.25
SPG7-211ENST00000565370 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
SPG7-211ENST00000565370 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
SPG7-211ENST00000565370 IL13P35225 146 aa16.59■□□□□ 0.25
SPG7-211ENST00000565370 C1orf141Q5JVX7 400 aa16.59■□□□□ 0.25
SPG7-211ENST00000565370 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
SPG7-211ENST00000565370 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
SPG7-211ENST00000565370 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
SPG7-211ENST00000565370 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
SPG7-211ENST00000565370 CCNL1Q9UK58 526 aaPredicted RBP16.59■□□□□ 0.25
SPG7-211ENST00000565370 DIAPH1O60610 1272 aaKnown RBP16.58■□□□□ 0.24
SPG7-211ENST00000565370 ZNF530Q6P9A1 599 aaPredicted RBP16.58■□□□□ 0.24
SPG7-211ENST00000565370 TMOD3Q9NYL9 352 aa16.58■□□□□ 0.24
SPG7-211ENST00000565370 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
SPG7-211ENST00000565370 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
SPG7-211ENST00000565370 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
SPG7-211ENST00000565370 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
SPG7-211ENST00000565370 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
SPG7-211ENST00000565370 LRRC4BQ9NT99 713 aa16.56■□□□□ 0.24
SPG7-211ENST00000565370 PPP1R1BQ9UD71 204 aaPredicted RBP16.56■□□□□ 0.24
SPG7-211ENST00000565370 TAF1LQ8IZX4 1826 aa16.54■□□□□ 0.24
SPG7-211ENST00000565370 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
SPG7-211ENST00000565370 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
SPG7-211ENST00000565370 PIGBQ92521 554 aa16.53■□□□□ 0.24
SPG7-211ENST00000565370 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
SPG7-211ENST00000565370 TFCP2L1Q9NZI6 479 aa16.53■□□□□ 0.24
SPG7-211ENST00000565370 SCN11AQ9UI33 1791 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
SPG7-211ENST00000565370 ZBTB7AO95365 584 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 HMOX1P09601 288 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 C4BP0C0L5 1744 aa16.52■□□□□ 0.24
SPG7-211ENST00000565370 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
SPG7-211ENST00000565370 KCNQ4P56696 695 aa16.5■□□□□ 0.23
SPG7-211ENST00000565370 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
SPG7-211ENST00000565370 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
SPG7-211ENST00000565370 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
SPG7-211ENST00000565370 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
SPG7-211ENST00000565370 PNPLA7Q6ZV29 1317 aa16.49■□□□□ 0.23
SPG7-211ENST00000565370 MRC1P22897 1456 aa16.49■□□□□ 0.23
SPG7-211ENST00000565370 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
SPG7-211ENST00000565370 CABP4P57796 275 aa16.49■□□□□ 0.23
SPG7-211ENST00000565370 AK7Q96M32 723 aa16.49■□□□□ 0.23
SPG7-211ENST00000565370 LOC102724428A0A0B4J2F2 783 aa16.48■□□□□ 0.23
SPG7-211ENST00000565370 DCAF8L1A6NGE4 600 aa16.48■□□□□ 0.23
SPG7-211ENST00000565370 SIK1P57059 783 aa16.48■□□□□ 0.23
SPG7-211ENST00000565370 SLC16A10Q8TF71 515 aa16.48■□□□□ 0.23
SPG7-211ENST00000565370 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms