RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 HMOX1P09601 288 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 KRT27Q7Z3Y8 459 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 TNS2Q63HR2 1409 aa18.58■□□□□ 0.57
CCNDBP1-206ENST00000565296 EXOC5O00471 708 aa18.58■□□□□ 0.57
CCNDBP1-206ENST00000565296 FAM182BQ5T319 152 aa18.58■□□□□ 0.57
CCNDBP1-206ENST00000565296 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
CCNDBP1-206ENST00000565296 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
CCNDBP1-206ENST00000565296 MARCH10Q8NA82 808 aaPredicted RBP18.57■□□□□ 0.56
CCNDBP1-206ENST00000565296 NUDCQ9Y266 331 aa18.57■□□□□ 0.56
CCNDBP1-206ENST00000565296 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
CCNDBP1-206ENST00000565296 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCNDBP1-206ENST00000565296 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
CCNDBP1-206ENST00000565296 ZCRB1Q8TBF4 217 aaKnown RBP18.56■□□□□ 0.56
CCNDBP1-206ENST00000565296 RSPH6AQ9H0K4 717 aa18.55■□□□□ 0.56
CCNDBP1-206ENST00000565296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCNDBP1-206ENST00000565296 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
CCNDBP1-206ENST00000565296 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
CCNDBP1-206ENST00000565296 CYP27B1O15528 508 aa18.52■□□□□ 0.56
CCNDBP1-206ENST00000565296 FCHSD2O94868 740 aa18.51■□□□□ 0.55
CCNDBP1-206ENST00000565296 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
CCNDBP1-206ENST00000565296 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
CCNDBP1-206ENST00000565296 PHACTR3Q96KR7 559 aa18.51■□□□□ 0.55
CCNDBP1-206ENST00000565296 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
CCNDBP1-206ENST00000565296 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
CCNDBP1-206ENST00000565296 MRS2Q9HD23 443 aa18.5■□□□□ 0.55
CCNDBP1-206ENST00000565296 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 PLEKHO1Q53GL0 409 aaPredicted RBP18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
CCNDBP1-206ENST00000565296 BCL9O00512 1426 aa18.48■□□□□ 0.55
CCNDBP1-206ENST00000565296 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
CCNDBP1-206ENST00000565296 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
CCNDBP1-206ENST00000565296 PHKG2P15735 406 aa18.47■□□□□ 0.55
CCNDBP1-206ENST00000565296 WDR43Q15061 677 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCNDBP1-206ENST00000565296 NKX1-1Q15270 411 aaPredicted RBP18.46■□□□□ 0.55
CCNDBP1-206ENST00000565296 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
CCNDBP1-206ENST00000565296 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
CCNDBP1-206ENST00000565296 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
CCNDBP1-206ENST00000565296 KCNQ2O43526 872 aa18.43■□□□□ 0.54
CCNDBP1-206ENST00000565296 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCNDBP1-206ENST00000565296 TRIM37O94972 964 aa18.42■□□□□ 0.54
CCNDBP1-206ENST00000565296 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
CCNDBP1-206ENST00000565296 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
CCNDBP1-206ENST00000565296 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
CCNDBP1-206ENST00000565296 KDM6AO15550 1401 aaPredicted RBP18.41■□□□□ 0.54
CCNDBP1-206ENST00000565296 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
CCNDBP1-206ENST00000565296 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
CCNDBP1-206ENST00000565296 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
CCNDBP1-206ENST00000565296 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.54
CCNDBP1-206ENST00000565296 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.54
CCNDBP1-206ENST00000565296 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.54
CCNDBP1-206ENST00000565296 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
CCNDBP1-206ENST00000565296 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
CCNDBP1-206ENST00000565296 RUNDC1Q96C34 613 aa18.38■□□□□ 0.53
CCNDBP1-206ENST00000565296 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
CCNDBP1-206ENST00000565296 SOCS7O14512 581 aa18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
CCNDBP1-206ENST00000565296 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
CCNDBP1-206ENST00000565296 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
CCNDBP1-206ENST00000565296 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
CCNDBP1-206ENST00000565296 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
CCNDBP1-206ENST00000565296 SBF2Q86WG5 1849 aa18.36■□□□□ 0.53
CCNDBP1-206ENST00000565296 NEFMP07197 916 aa18.35■□□□□ 0.53
CCNDBP1-206ENST00000565296 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
CCNDBP1-206ENST00000565296 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
CCNDBP1-206ENST00000565296 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
CCNDBP1-206ENST00000565296 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
CCNDBP1-206ENST00000565296 ERVV-2B6SEH9 535 aa18.34■□□□□ 0.53
CCNDBP1-206ENST00000565296 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
CCNDBP1-206ENST00000565296 PIGBQ92521 554 aa18.34■□□□□ 0.53
CCNDBP1-206ENST00000565296 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
CCNDBP1-206ENST00000565296 TNS1Q9HBL0 1735 aaKnown RBP18.33■□□□□ 0.53
CCNDBP1-206ENST00000565296 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.53
CCNDBP1-206ENST00000565296 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 APAF1O14727 1248 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 APBA3O96018 575 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 MCM10Q7L590 875 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
CCNDBP1-206ENST00000565296 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
CCNDBP1-206ENST00000565296 RIPK4P57078 832 aa18.31■□□□□ 0.52
CCNDBP1-206ENST00000565296 TMOD3Q9NYL9 352 aa18.31■□□□□ 0.52
CCNDBP1-206ENST00000565296 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 CABP4P57796 275 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 MRC1P22897 1456 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 NEUROD2Q15784 382 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
CCNDBP1-206ENST00000565296 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
CCNDBP1-206ENST00000565296 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms