RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 IGSF1Q8N6C5 1336 aa25.18■■□□□ 1.62
PKD1-229ENST00000564890 DDX10Q13206 875 aaKnown RBP25.17■■□□□ 1.62
PKD1-229ENST00000564890 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
PKD1-229ENST00000564890 SHANK3Q9BYB0 1731 aa25.17■■□□□ 1.62
PKD1-229ENST00000564890 IL13P35225 146 aa25.16■■□□□ 1.62
PKD1-229ENST00000564890 PTF1AQ7RTS3 328 aa25.16■■□□□ 1.62
PKD1-229ENST00000564890 ACSBG1Q96GR2 724 aa25.16■■□□□ 1.62
PKD1-229ENST00000564890 PCDH11XQ9BZA7 1347 aa25.13■■□□□ 1.61
PKD1-229ENST00000564890 PCDH11YQ9BZA8 1340 aa25.13■■□□□ 1.61
PKD1-229ENST00000564890 KCNQ2O43526 872 aa25.13■■□□□ 1.61
PKD1-229ENST00000564890 EZH2Q15910 746 aaKnown RBP25.13■■□□□ 1.61
PKD1-229ENST00000564890 CAMKK2Q96RR4 588 aa25.13■■□□□ 1.61
PKD1-229ENST00000564890 PKD1L3Q7Z443 1732 aa25.12■■□□□ 1.61
PKD1-229ENST00000564890 NHSQ6T4R5 1651 aa25.11■■□□□ 1.61
PKD1-229ENST00000564890 DIAPH1O60610 1272 aaKnown RBP25.11■■□□□ 1.61
PKD1-229ENST00000564890 SPG7Q9UQ90 795 aa25.11■■□□□ 1.61
PKD1-229ENST00000564890 PPP2R1AP30153 589 aa25.1■■□□□ 1.61
PKD1-229ENST00000564890 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
PKD1-229ENST00000564890 PARD3Q8TEW0 1356 aa25.09■■□□□ 1.61
PKD1-229ENST00000564890 CYP27B1O15528 508 aa25.09■■□□□ 1.61
PKD1-229ENST00000564890 SULT6B1Q6IMI4 303 aa25.09■■□□□ 1.61
PKD1-229ENST00000564890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.09■■□□□ 1.61
PKD1-229ENST00000564890 COL3A1P02461 1466 aaPredicted RBP25.09■■□□□ 1.61
PKD1-229ENST00000564890 KAT6BQ8WYB5 2073 aa25.08■■□□□ 1.61
PKD1-229ENST00000564890 PLEKHG2Q9H7P9 1386 aa25.06■■□□□ 1.6
PKD1-229ENST00000564890 PLSCR1O15162 318 aa25.06■■□□□ 1.6
PKD1-229ENST00000564890 CFAP53Q96M91 514 aa25.06■■□□□ 1.6
PKD1-229ENST00000564890 DOT1LQ8TEK3 1739 aa25.06■■□□□ 1.6
PKD1-229ENST00000564890 KDRP35968 1356 aa25.05■■□□□ 1.6
PKD1-229ENST00000564890 PRIM1P49642 420 aaKnown RBP25.05■■□□□ 1.6
PKD1-229ENST00000564890 SYTL4Q96C24 671 aaPredicted RBP25.05■■□□□ 1.6
PKD1-229ENST00000564890 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
PKD1-229ENST00000564890 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
PKD1-229ENST00000564890 HMOX1P09601 288 aa25.03■■□□□ 1.6
PKD1-229ENST00000564890 PLEKHO1Q53GL0 409 aaPredicted RBP25.03■■□□□ 1.6
PKD1-229ENST00000564890 RREB1Q92766 1687 aa25.03■■□□□ 1.6
PKD1-229ENST00000564890 BTAF1O14981 1849 aa25.02■■□□□ 1.6
PKD1-229ENST00000564890 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
PKD1-229ENST00000564890 PHKG2P15735 406 aa25.01■■□□□ 1.59
PKD1-229ENST00000564890 AMOTQ4VCS5 1084 aa25.01■■□□□ 1.59
PKD1-229ENST00000564890 IFNL2Q8IZJ0 200 aa25.01■■□□□ 1.59
PKD1-229ENST00000564890 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
PKD1-229ENST00000564890 NKX1-1Q15270 411 aaPredicted RBP25■■□□□ 1.59
PKD1-229ENST00000564890 NUP188Q5SRE5 1749 aa24.99■■□□□ 1.59
PKD1-229ENST00000564890 RALBP1Q15311 655 aa24.98■■□□□ 1.59
PKD1-229ENST00000564890 ZNF530Q6P9A1 599 aaPredicted RBP24.98■■□□□ 1.59
PKD1-229ENST00000564890 PROM2Q8N271 834 aa24.97■■□□□ 1.59
PKD1-229ENST00000564890 TOGARAM1Q9Y4F4 1720 aa24.97■■□□□ 1.59
PKD1-229ENST00000564890 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
PKD1-229ENST00000564890 NUDCQ9Y266 331 aa24.96■■□□□ 1.59
PKD1-229ENST00000564890 C1orf141Q5JVX7 400 aa24.94■■□□□ 1.58
PKD1-229ENST00000564890 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
PKD1-229ENST00000564890 PSDA5PKW4 1024 aaPredicted RBP24.93■■□□□ 1.58
PKD1-229ENST00000564890 HSP90AB1P08238 724 aaKnown RBP24.93■■□□□ 1.58
PKD1-229ENST00000564890 NBPF14Q5TI25 921 aa24.93■■□□□ 1.58
PKD1-229ENST00000564890 R3HDM1Q15032 1099 aaKnown RBP24.92■■□□□ 1.58
PKD1-229ENST00000564890 ITGB4P16144 1822 aa24.91■■□□□ 1.58
PKD1-229ENST00000564890 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
PKD1-229ENST00000564890 U2AF1L5P0DN76 240 aaPredicted RBP24.9■■□□□ 1.58
PKD1-229ENST00000564890 U2AF1Q01081 240 aaKnown RBP eCLIP24.9■■□□□ 1.58
PKD1-229ENST00000564890 PIGBQ92521 554 aa24.89■■□□□ 1.58
PKD1-229ENST00000564890 TMOD3Q9NYL9 352 aa24.89■■□□□ 1.58
PKD1-229ENST00000564890 MYBBP1AQ9BQG0 1328 aaKnown RBP24.88■■□□□ 1.57
PKD1-229ENST00000564890 KDM6AO15550 1401 aaPredicted RBP24.88■■□□□ 1.57
PKD1-229ENST00000564890 MTHFSDQ2M296 383 aaKnown RBP24.88■■□□□ 1.57
PKD1-229ENST00000564890 AKAP4Q5JQC9 854 aa24.88■■□□□ 1.57
PKD1-229ENST00000564890 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
PKD1-229ENST00000564890 ANO8Q9HCE9 1232 aaPredicted RBP24.88■■□□□ 1.57
PKD1-229ENST00000564890 ERVV-2B6SEH9 535 aa24.86■■□□□ 1.57
PKD1-229ENST00000564890 PRKAR2BP31323 418 aa24.86■■□□□ 1.57
PKD1-229ENST00000564890 SLC27A3Q5K4L6 730 aa24.86■■□□□ 1.57
PKD1-229ENST00000564890 LRRC4BQ9NT99 713 aa24.86■■□□□ 1.57
PKD1-229ENST00000564890 PRKRIP1Q9H875 184 aaPredicted RBP24.85■■□□□ 1.57
PKD1-229ENST00000564890 LY75O60449 1722 aa24.84■■□□□ 1.57
PKD1-229ENST00000564890 PALLDQ8WX93 1383 aa24.84■■□□□ 1.57
PKD1-229ENST00000564890 SMARCC1Q92922 1105 aaPredicted RBP24.84■■□□□ 1.57
PKD1-229ENST00000564890 FCHSD2O94868 740 aa24.83■■□□□ 1.57
PKD1-229ENST00000564890 KCNQ4P56696 695 aa24.83■■□□□ 1.57
PKD1-229ENST00000564890 CABP4P57796 275 aa24.83■■□□□ 1.57
PKD1-229ENST00000564890 STK32BQ9NY57 414 aa24.83■■□□□ 1.57
PKD1-229ENST00000564890 CCNL1Q9UK58 526 aaPredicted RBP24.83■■□□□ 1.57
PKD1-229ENST00000564890 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
PKD1-229ENST00000564890 PAPPAQ13219 1627 aa24.82■■□□□ 1.56
PKD1-229ENST00000564890 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
PKD1-229ENST00000564890 ASAP1Q9ULH1 1129 aa24.81■■□□□ 1.56
PKD1-229ENST00000564890 RNMTO43148 476 aaKnown RBP24.79■■□□□ 1.56
PKD1-229ENST00000564890 SLC15A2Q16348 729 aa24.79■■□□□ 1.56
PKD1-229ENST00000564890 LGR6Q9HBX8 967 aa24.79■■□□□ 1.56
PKD1-229ENST00000564890 SCN11AQ9UI33 1791 aa24.79■■□□□ 1.56
PKD1-229ENST00000564890 ATG3Q9NT62 314 aa24.78■■□□□ 1.56
PKD1-229ENST00000564890 MAP3K5Q99683 1374 aa24.78■■□□□ 1.56
PKD1-229ENST00000564890 ZNF827Q17R98 1081 aa24.77■■□□□ 1.56
PKD1-229ENST00000564890 NFATC2IPQ8NCF5 419 aa24.77■■□□□ 1.56
PKD1-229ENST00000564890 GNAT3A8MTJ3 354 aa24.76■■□□□ 1.55
PKD1-229ENST00000564890 AKT1S1Q96B36 256 aa24.75■■□□□ 1.55
PKD1-229ENST00000564890 SLC52A2Q9HAB3 445 aa24.75■■□□□ 1.55
PKD1-229ENST00000564890 LOC102724428A0A0B4J2F2 783 aa24.74■■□□□ 1.55
PKD1-229ENST00000564890 SIK1P57059 783 aa24.74■■□□□ 1.55
PKD1-229ENST00000564890 MRC1P22897 1456 aa24.74■■□□□ 1.55
PKD1-229ENST00000564890 ADAMTS7Q9UKP4 1686 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms