RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
SPG7-209ENST00000564047 R3HDM1Q15032 1099 aaKnown RBP17.07■□□□□ 0.32
SPG7-209ENST00000564047 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
SPG7-209ENST00000564047 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
SPG7-209ENST00000564047 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
SPG7-209ENST00000564047 YY1P25490 414 aa17.06■□□□□ 0.32
SPG7-209ENST00000564047 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPG7-209ENST00000564047 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
SPG7-209ENST00000564047 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
SPG7-209ENST00000564047 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
SPG7-209ENST00000564047 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
SPG7-209ENST00000564047 CRB1P82279 1406 aa17.04■□□□□ 0.32
SPG7-209ENST00000564047 APAF1O14727 1248 aa17.04■□□□□ 0.32
SPG7-209ENST00000564047 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
SPG7-209ENST00000564047 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
SPG7-209ENST00000564047 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
SPG7-209ENST00000564047 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
SPG7-209ENST00000564047 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
SPG7-209ENST00000564047 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
SPG7-209ENST00000564047 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
SPG7-209ENST00000564047 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
SPG7-209ENST00000564047 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
SPG7-209ENST00000564047 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
SPG7-209ENST00000564047 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
SPG7-209ENST00000564047 NFE2L2Q16236 605 aa17■□□□□ 0.31
SPG7-209ENST00000564047 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
SPG7-209ENST00000564047 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
SPG7-209ENST00000564047 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
SPG7-209ENST00000564047 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
SPG7-209ENST00000564047 GAS2L2Q8NHY3 880 aa16.99■□□□□ 0.31
SPG7-209ENST00000564047 CCDC27Q2M243 656 aa16.98■□□□□ 0.31
SPG7-209ENST00000564047 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
SPG7-209ENST00000564047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.317e-14■□□□□ 10.1
SPG7-209ENST00000564047 THRAP3Q9Y2W1 955 aaKnown RBP16.98■□□□□ 0.31
SPG7-209ENST00000564047 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 IL2RBP14784 551 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 RIPK4P57078 832 aa16.97■□□□□ 0.31
SPG7-209ENST00000564047 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
SPG7-209ENST00000564047 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
SPG7-209ENST00000564047 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
SPG7-209ENST00000564047 MEGF6O75095 1541 aa16.96■□□□□ 0.31
SPG7-209ENST00000564047 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
SPG7-209ENST00000564047 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
SPG7-209ENST00000564047 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
SPG7-209ENST00000564047 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
SPG7-209ENST00000564047 CDCA7Q9BWT1 371 aaPredicted RBP16.95■□□□□ 0.3
SPG7-209ENST00000564047 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
SPG7-209ENST00000564047 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
SPG7-209ENST00000564047 UTRNP46939 3433 aa16.94■□□□□ 0.3
SPG7-209ENST00000564047 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
SPG7-209ENST00000564047 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
SPG7-209ENST00000564047 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
SPG7-209ENST00000564047 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
SPG7-209ENST00000564047 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
SPG7-209ENST00000564047 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
SPG7-209ENST00000564047 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
SPG7-209ENST00000564047 CAMKK2Q96RR4 588 aa16.92■□□□□ 0.3
SPG7-209ENST00000564047 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
SPG7-209ENST00000564047 PARP4Q9UKK3 1724 aaKnown RBP16.91■□□□□ 0.3
SPG7-209ENST00000564047 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
SPG7-209ENST00000564047 PDE3BQ13370 1112 aa16.91■□□□□ 0.3
SPG7-209ENST00000564047 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SPG7-209ENST00000564047 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
SPG7-209ENST00000564047 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
SPG7-209ENST00000564047 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
SPG7-209ENST00000564047 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
SPG7-209ENST00000564047 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
SPG7-209ENST00000564047 TRIM37O94972 964 aa16.9■□□□□ 0.3
SPG7-209ENST00000564047 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
SPG7-209ENST00000564047 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
SPG7-209ENST00000564047 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
SPG7-209ENST00000564047 APBA3O96018 575 aa16.89■□□□□ 0.29
SPG7-209ENST00000564047 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
SPG7-209ENST00000564047 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
SPG7-209ENST00000564047 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
SPG7-209ENST00000564047 PHKG2P15735 406 aa16.88■□□□□ 0.29
SPG7-209ENST00000564047 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
SPG7-209ENST00000564047 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
SPG7-209ENST00000564047 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
SPG7-209ENST00000564047 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
SPG7-209ENST00000564047 RREB1Q92766 1687 aa16.88■□□□□ 0.29
SPG7-209ENST00000564047 EXOC5O00471 708 aa16.87■□□□□ 0.29
SPG7-209ENST00000564047 CYP27B1O15528 508 aa16.87■□□□□ 0.29
SPG7-209ENST00000564047 IL16Q14005 1332 aa16.87■□□□□ 0.29
SPG7-209ENST00000564047 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SPG7-209ENST00000564047 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
SPG7-209ENST00000564047 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
SPG7-209ENST00000564047 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
SPG7-209ENST00000564047 WNK3Q9BYP7 1800 aa16.85■□□□□ 0.29
SPG7-209ENST00000564047 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
SPG7-209ENST00000564047 MCM10Q7L590 875 aa16.85■□□□□ 0.29
SPG7-209ENST00000564047 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
SPG7-209ENST00000564047 E9PSI1 815 aa16.84■□□□□ 0.29
SPG7-209ENST00000564047 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
SPG7-209ENST00000564047 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
SPG7-209ENST00000564047 DDB1Q16531 1140 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms