RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 COG3Q96JB2 828 aa14.76□□□□□ -0.05
LCMT1-204ENST00000564011 PUS7Q96PZ0 661 aaKnown RBP14.76□□□□□ -0.05
LCMT1-204ENST00000564011 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
LCMT1-204ENST00000564011 SMG6Q86US8 1419 aaKnown RBP14.75□□□□□ -0.05
LCMT1-204ENST00000564011 AMPHP49418 695 aa14.75□□□□□ -0.05
LCMT1-204ENST00000564011 CARD11Q9BXL7 1154 aa14.75□□□□□ -0.05
LCMT1-204ENST00000564011 PRIM1P49642 420 aaKnown RBP14.74□□□□□ -0.05
LCMT1-204ENST00000564011 NEUROD1Q13562 356 aa14.74□□□□□ -0.05
LCMT1-204ENST00000564011 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
LCMT1-204ENST00000564011 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
LCMT1-204ENST00000564011 GPBP1L1Q9HC44 474 aaPredicted RBP14.74□□□□□ -0.05
LCMT1-204ENST00000564011 RAPGEF4Q8WZA2 1011 aa14.72□□□□□ -0.05
LCMT1-204ENST00000564011 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
LCMT1-204ENST00000564011 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
LCMT1-204ENST00000564011 COL24A1Q17RW2 1714 aa14.71□□□□□ -0.05
LCMT1-204ENST00000564011 TATP17735 454 aaPredicted RBP14.69□□□□□ -0.06
LCMT1-204ENST00000564011 NLGN2Q8NFZ4 835 aa14.69□□□□□ -0.06
LCMT1-204ENST00000564011 SLC12A5Q9H2X9 1139 aa14.69□□□□□ -0.06
LCMT1-204ENST00000564011 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
LCMT1-204ENST00000564011 LY75O60449 1722 aa14.69□□□□□ -0.06
LCMT1-204ENST00000564011 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
LCMT1-204ENST00000564011 DOT1LQ8TEK3 1739 aa14.68□□□□□ -0.06
LCMT1-204ENST00000564011 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
LCMT1-204ENST00000564011 PCDH11XQ9BZA7 1347 aa14.67□□□□□ -0.06
LCMT1-204ENST00000564011 PCDH11YQ9BZA8 1340 aa14.67□□□□□ -0.06
LCMT1-204ENST00000564011 HOXC9P31274 260 aa14.67□□□□□ -0.06
LCMT1-204ENST00000564011 AK7Q96M32 723 aa14.67□□□□□ -0.06
LCMT1-204ENST00000564011 CD163L1Q9NR16 1453 aa14.67□□□□□ -0.06
LCMT1-204ENST00000564011 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
LCMT1-204ENST00000564011 YBX3P16989 372 aaKnown RBP eCLIP14.66□□□□□ -0.062e-9■■■□□ 14.8
LCMT1-204ENST00000564011 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
LCMT1-204ENST00000564011 SIN3AQ96ST3 1273 aa14.66□□□□□ -0.06
LCMT1-204ENST00000564011 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
LCMT1-204ENST00000564011 HSPA6P17066 643 aa14.65□□□□□ -0.06
LCMT1-204ENST00000564011 MAP3K19Q56UN5 1328 aa14.65□□□□□ -0.06
LCMT1-204ENST00000564011 KCNQ4P56696 695 aa14.64□□□□□ -0.07
LCMT1-204ENST00000564011 TUBGCP6Q96RT7 1819 aa14.63□□□□□ -0.07
LCMT1-204ENST00000564011 NSD2O96028 1365 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 KIF24Q5T7B8 1368 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 PALLDQ8WX93 1383 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 C5P01031 1676 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 MSL1Q68DK7 614 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
LCMT1-204ENST00000564011 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
LCMT1-204ENST00000564011 ZNF526Q8TF50 670 aaPredicted RBP14.6□□□□□ -0.07
LCMT1-204ENST00000564011 MEGF6O75095 1541 aa14.6□□□□□ -0.07
LCMT1-204ENST00000564011 SSFA2P28290 1259 aa14.59□□□□□ -0.07
LCMT1-204ENST00000564011 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
LCMT1-204ENST00000564011 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
LCMT1-204ENST00000564011 ADCY9O60503 1353 aa14.59□□□□□ -0.07
LCMT1-204ENST00000564011 APLP1P51693 650 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 TMF1P82094 1093 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 INSRP06213 1382 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 FLT4P35916 1363 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 PCNTO95613 3336 aa14.58□□□□□ -0.08
LCMT1-204ENST00000564011 PHF14O94880 888 aa14.56□□□□□ -0.08
LCMT1-204ENST00000564011 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
LCMT1-204ENST00000564011 C4BP0C0L5 1744 aa14.55□□□□□ -0.08
LCMT1-204ENST00000564011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.55□□□□□ -0.08
LCMT1-204ENST00000564011 C16orf71Q8IYS4 520 aaPredicted RBP14.55□□□□□ -0.08
LCMT1-204ENST00000564011 USHBP1Q8N6Y0 703 aa14.55□□□□□ -0.08
LCMT1-204ENST00000564011 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
LCMT1-204ENST00000564011 ST20-MTHFSA0A0A6YYL1 179 aa14.54□□□□□ -0.08
LCMT1-204ENST00000564011 RGPD2P0DJD1 1756 aa14.53□□□□□ -0.08
LCMT1-204ENST00000564011 TOMM70O94826 608 aa14.53□□□□□ -0.08
LCMT1-204ENST00000564011 TGFB2P61812 414 aa14.53□□□□□ -0.08
LCMT1-204ENST00000564011 NLGN1Q8N2Q7 840 aa14.53□□□□□ -0.08
LCMT1-204ENST00000564011 GGNBP2Q9H3C7 697 aa14.53□□□□□ -0.08
LCMT1-204ENST00000564011 TAF1LQ8IZX4 1826 aa14.52□□□□□ -0.08
LCMT1-204ENST00000564011 LOC102724428A0A0B4J2F2 783 aa14.52□□□□□ -0.09
LCMT1-204ENST00000564011 FYB1O15117 783 aa14.52□□□□□ -0.09
LCMT1-204ENST00000564011 SIK1P57059 783 aa14.52□□□□□ -0.09
LCMT1-204ENST00000564011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.092e-7■■□□□ 13.3
LCMT1-204ENST00000564011 GNPATO15228 680 aa14.51□□□□□ -0.09
LCMT1-204ENST00000564011 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
LCMT1-204ENST00000564011 CCDC87Q9NVE4 849 aa14.51□□□□□ -0.09
LCMT1-204ENST00000564011 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
LCMT1-204ENST00000564011 TRAPPC3LQ5T215 181 aa14.5□□□□□ -0.09
LCMT1-204ENST00000564011 IFNL2Q8IZJ0 200 aa14.5□□□□□ -0.09
LCMT1-204ENST00000564011 TESK2Q96S53 571 aa14.5□□□□□ -0.09
LCMT1-204ENST00000564011 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
LCMT1-204ENST00000564011 PPM1GO15355 546 aaPredicted RBP14.49□□□□□ -0.09
LCMT1-204ENST00000564011 CYP27B1O15528 508 aa14.49□□□□□ -0.09
LCMT1-204ENST00000564011 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
LCMT1-204ENST00000564011 ADRA2BP18089 450 aa14.49□□□□□ -0.09
LCMT1-204ENST00000564011 FBLN1P23142 703 aa14.49□□□□□ -0.09
LCMT1-204ENST00000564011 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
LCMT1-204ENST00000564011 PIGBQ92521 554 aa14.49□□□□□ -0.09
LCMT1-204ENST00000564011 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
LCMT1-204ENST00000564011 PLEKHG2Q9H7P9 1386 aa14.48□□□□□ -0.09
LCMT1-204ENST00000564011 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
LCMT1-204ENST00000564011 KIF3CO14782 793 aa14.48□□□□□ -0.09
LCMT1-204ENST00000564011 PARP3Q9Y6F1 533 aa14.48□□□□□ -0.09
LCMT1-204ENST00000564011 ITGB4P16144 1822 aa14.48□□□□□ -0.09
LCMT1-204ENST00000564011 KDM2BQ8NHM5 1336 aa14.47□□□□□ -0.09
LCMT1-204ENST00000564011 UBR3Q6ZT12 1888 aa14.47□□□□□ -0.09
LCMT1-204ENST00000564011 MMP10P09238 476 aa14.47□□□□□ -0.09
LCMT1-204ENST00000564011 RFC4P35249 363 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms