RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
SPG7-206ENST00000562775 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
SPG7-206ENST00000562775 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
SPG7-206ENST00000562775 COL14A1Q05707 1796 aaKnown RBP18.24■□□□□ 0.51
SPG7-206ENST00000562775 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
SPG7-206ENST00000562775 MCM10Q7L590 875 aa18.23■□□□□ 0.51
SPG7-206ENST00000562775 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
SPG7-206ENST00000562775 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
SPG7-206ENST00000562775 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
SPG7-206ENST00000562775 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
SPG7-206ENST00000562775 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
SPG7-206ENST00000562775 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
SPG7-206ENST00000562775 EVA1CP58658 441 aa18.21■□□□□ 0.51
SPG7-206ENST00000562775 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
SPG7-206ENST00000562775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.21■□□□□ 0.517e-14■□□□□ 10.1
SPG7-206ENST00000562775 CRB1P82279 1406 aa18.2■□□□□ 0.5
SPG7-206ENST00000562775 AKAP4Q5JQC9 854 aa18.2■□□□□ 0.5
SPG7-206ENST00000562775 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
SPG7-206ENST00000562775 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
SPG7-206ENST00000562775 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
SPG7-206ENST00000562775 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
SPG7-206ENST00000562775 MBIPQ9NS73 344 aa18.19■□□□□ 0.5
SPG7-206ENST00000562775 JCADQ9P266 1359 aa18.19■□□□□ 0.5
SPG7-206ENST00000562775 MEGF6O75095 1541 aa18.19■□□□□ 0.5
SPG7-206ENST00000562775 CHL1O00533 1208 aa18.18■□□□□ 0.5
SPG7-206ENST00000562775 IRX6P78412 446 aaPredicted RBP18.18■□□□□ 0.5
SPG7-206ENST00000562775 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SPG7-206ENST00000562775 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
SPG7-206ENST00000562775 LRRC37A3O60309 1634 aa18.18■□□□□ 0.5
SPG7-206ENST00000562775 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
SPG7-206ENST00000562775 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
SPG7-206ENST00000562775 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
SPG7-206ENST00000562775 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
SPG7-206ENST00000562775 ADAMTS2O95450 1211 aa18.16■□□□□ 0.5
SPG7-206ENST00000562775 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
SPG7-206ENST00000562775 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
SPG7-206ENST00000562775 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
SPG7-206ENST00000562775 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
SPG7-206ENST00000562775 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
SPG7-206ENST00000562775 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.5
SPG7-206ENST00000562775 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
SPG7-206ENST00000562775 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
SPG7-206ENST00000562775 PKD1L3Q7Z443 1732 aa18.14■□□□□ 0.49
SPG7-206ENST00000562775 PARP4Q9UKK3 1724 aaKnown RBP18.14■□□□□ 0.49
SPG7-206ENST00000562775 BCAR3O75815 825 aa18.13■□□□□ 0.49
SPG7-206ENST00000562775 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
SPG7-206ENST00000562775 IL2RBP14784 551 aa18.13■□□□□ 0.49
SPG7-206ENST00000562775 TAF7Q15545 349 aaPredicted RBP18.13■□□□□ 0.49
SPG7-206ENST00000562775 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
SPG7-206ENST00000562775 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
SPG7-206ENST00000562775 PLIN1O60240 522 aa18.12■□□□□ 0.49
SPG7-206ENST00000562775 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
SPG7-206ENST00000562775 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
SPG7-206ENST00000562775 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
SPG7-206ENST00000562775 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
SPG7-206ENST00000562775 PHKG2P15735 406 aa18.11■□□□□ 0.49
SPG7-206ENST00000562775 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
SPG7-206ENST00000562775 VAMP4O75379 141 aa18.1■□□□□ 0.49
SPG7-206ENST00000562775 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
SPG7-206ENST00000562775 TEFQ10587 303 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
SPG7-206ENST00000562775 ALDH1L2Q3SY69 923 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 TSPYL6Q8N831 410 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
SPG7-206ENST00000562775 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 SLIT2O94813 1529 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
SPG7-206ENST00000562775 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
SPG7-206ENST00000562775 CYP27B1O15528 508 aa18.08■□□□□ 0.49
SPG7-206ENST00000562775 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.49
SPG7-206ENST00000562775 HSPA1LP34931 641 aa18.08■□□□□ 0.49
SPG7-206ENST00000562775 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
SPG7-206ENST00000562775 USP35Q9P2H5 1018 aa18.08■□□□□ 0.48
SPG7-206ENST00000562775 PCDH11XQ9BZA7 1347 aa18.07■□□□□ 0.48
SPG7-206ENST00000562775 PCDH11YQ9BZA8 1340 aa18.07■□□□□ 0.48
SPG7-206ENST00000562775 ELL2O00472 640 aaPredicted RBP18.07■□□□□ 0.48
SPG7-206ENST00000562775 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
SPG7-206ENST00000562775 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
SPG7-206ENST00000562775 SCN11AQ9UI33 1791 aa18.06■□□□□ 0.48
SPG7-206ENST00000562775 DCAF5Q96JK2 942 aa18.06■□□□□ 0.48
SPG7-206ENST00000562775 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
SPG7-206ENST00000562775 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
SPG7-206ENST00000562775 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
SPG7-206ENST00000562775 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
SPG7-206ENST00000562775 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
SPG7-206ENST00000562775 FRAT1Q92837 279 aaPredicted RBP18.04■□□□□ 0.48
SPG7-206ENST00000562775 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
SPG7-206ENST00000562775 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
SPG7-206ENST00000562775 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
SPG7-206ENST00000562775 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
SPG7-206ENST00000562775 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
SPG7-206ENST00000562775 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
SPG7-206ENST00000562775 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
SPG7-206ENST00000562775 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
SPG7-206ENST00000562775 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
SPG7-206ENST00000562775 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
SPG7-206ENST00000562775 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
SPG7-206ENST00000562775 CDCA7Q9BWT1 371 aaPredicted RBP18.03■□□□□ 0.48
SPG7-206ENST00000562775 LRP6O75581 1613 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms