RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
GTF3C1-203ENST00000562609 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
GTF3C1-203ENST00000562609 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
GTF3C1-203ENST00000562609 ZNF445P59923 1031 aa17.29■□□□□ 0.36
GTF3C1-203ENST00000562609 ACEP12821 1306 aa17.29■□□□□ 0.36
GTF3C1-203ENST00000562609 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 MCM5P33992 734 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 TSC1Q92574 1164 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 C3P01024 1663 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 TECPR2O15040 1411 aa17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-203ENST00000562609 CAVIN1Q6NZI2 390 aaKnown RBP17.27■□□□□ 0.36
GTF3C1-203ENST00000562609 IPO4Q8TEX9 1081 aaKnown RBP17.27■□□□□ 0.35
GTF3C1-203ENST00000562609 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
GTF3C1-203ENST00000562609 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
GTF3C1-203ENST00000562609 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
GTF3C1-203ENST00000562609 VGLL3A8MV65 326 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 MYRIPQ8NFW9 859 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 ADGRB2O60241 1585 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 FCHSD2O94868 740 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-203ENST00000562609 IL13P35225 146 aa17.24■□□□□ 0.35
GTF3C1-203ENST00000562609 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
GTF3C1-203ENST00000562609 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
GTF3C1-203ENST00000562609 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
GTF3C1-203ENST00000562609 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 TTC21BQ7Z4L5 1316 aa17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
GTF3C1-203ENST00000562609 KNDC1Q76NI1 1749 aa17.22■□□□□ 0.35
GTF3C1-203ENST00000562609 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
GTF3C1-203ENST00000562609 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
GTF3C1-203ENST00000562609 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
GTF3C1-203ENST00000562609 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
GTF3C1-203ENST00000562609 KCNA6P17658 529 aa17.21■□□□□ 0.35
GTF3C1-203ENST00000562609 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
GTF3C1-203ENST00000562609 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 IGSF3O75054 1194 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
GTF3C1-203ENST00000562609 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
GTF3C1-203ENST00000562609 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
GTF3C1-203ENST00000562609 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
GTF3C1-203ENST00000562609 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
GTF3C1-203ENST00000562609 CGNQ9P2M7 1197 aaKnown RBP17.19■□□□□ 0.34
GTF3C1-203ENST00000562609 ZBTB22O15209 634 aa17.18■□□□□ 0.34
GTF3C1-203ENST00000562609 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-203ENST00000562609 ITSN1Q15811 1721 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 PTMAP06454 111 aaKnown RBP17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 KIF2CQ99661 725 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 TAF3Q5VWG9 929 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
GTF3C1-203ENST00000562609 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 TRIM27P14373 513 aa17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 LMBRD1Q9NUN5 540 aa17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 ARHGAP23Q9P227 1491 aa17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-203ENST00000562609 AATKQ6ZMQ8 1374 aa17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 USP6P35125 1406 aa17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 SLIT1O75093 1534 aa17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
GTF3C1-203ENST00000562609 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-203ENST00000562609 CDK11BP21127 795 aaKnown RBP17.14■□□□□ 0.33
GTF3C1-203ENST00000562609 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
GTF3C1-203ENST00000562609 RNF214Q8ND24 703 aa17.14■□□□□ 0.33
GTF3C1-203ENST00000562609 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
GTF3C1-203ENST00000562609 ITPRIPQ8IWB1 547 aa17.13■□□□□ 0.33
GTF3C1-203ENST00000562609 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
GTF3C1-203ENST00000562609 IL16Q14005 1332 aa17.12■□□□□ 0.33
GTF3C1-203ENST00000562609 SYCE3A1L190 88 aa17.12■□□□□ 0.33
GTF3C1-203ENST00000562609 ZNF771Q7L3S4 317 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms