RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
LPCAT4-202ENST00000562404 LRP5O75197 1615 aa15.29■□□□□ 0.04
LPCAT4-202ENST00000562404 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
LPCAT4-202ENST00000562404 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
LPCAT4-202ENST00000562404 NCAPD2Q15021 1401 aa15.28■□□□□ 0.04
LPCAT4-202ENST00000562404 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
LPCAT4-202ENST00000562404 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
LPCAT4-202ENST00000562404 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.04
LPCAT4-202ENST00000562404 ANO8Q9HCE9 1232 aaPredicted RBP15.27■□□□□ 0.04
LPCAT4-202ENST00000562404 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
LPCAT4-202ENST00000562404 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
LPCAT4-202ENST00000562404 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
LPCAT4-202ENST00000562404 EYA1Q99502 592 aa15.25■□□□□ 0.03
LPCAT4-202ENST00000562404 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
LPCAT4-202ENST00000562404 NSD2O96028 1365 aa15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 ITGB4P16144 1822 aa15.24■□□□□ 0.03
LPCAT4-202ENST00000562404 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
LPCAT4-202ENST00000562404 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
LPCAT4-202ENST00000562404 KNSTRNQ9Y448 316 aa15.23■□□□□ 0.03
LPCAT4-202ENST00000562404 LY75O60449 1722 aa15.23■□□□□ 0.03
LPCAT4-202ENST00000562404 CYP27B1O15528 508 aa15.22■□□□□ 0.03
LPCAT4-202ENST00000562404 PRIM1P49642 420 aaKnown RBP15.22■□□□□ 0.03
LPCAT4-202ENST00000562404 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
LPCAT4-202ENST00000562404 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
LPCAT4-202ENST00000562404 NBPF14Q5TI25 921 aa15.21■□□□□ 0.03
LPCAT4-202ENST00000562404 TUBGCP6Q96RT7 1819 aa15.2■□□□□ 0.02
LPCAT4-202ENST00000562404 LRRC4BQ9NT99 713 aa15.2■□□□□ 0.02
LPCAT4-202ENST00000562404 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
LPCAT4-202ENST00000562404 KCNQ4P56696 695 aa15.18■□□□□ 0.02
LPCAT4-202ENST00000562404 IGSF1Q8N6C5 1336 aa15.17■□□□□ 0.02
LPCAT4-202ENST00000562404 PCDH11XQ9BZA7 1347 aa15.17■□□□□ 0.02
LPCAT4-202ENST00000562404 PCDH11YQ9BZA8 1340 aa15.17■□□□□ 0.02
LPCAT4-202ENST00000562404 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
LPCAT4-202ENST00000562404 SLC15A2Q16348 729 aa15.16■□□□□ 0.02
LPCAT4-202ENST00000562404 ZNF827Q17R98 1081 aa15.16■□□□□ 0.02
LPCAT4-202ENST00000562404 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
LPCAT4-202ENST00000562404 AEBP1Q8IUX7 1158 aa15.15■□□□□ 0.02
LPCAT4-202ENST00000562404 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
LPCAT4-202ENST00000562404 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
LPCAT4-202ENST00000562404 IL13P35225 146 aa15.13■□□□□ 0.01
LPCAT4-202ENST00000562404 MTHFSP49914 203 aa15.13■□□□□ 0.01
LPCAT4-202ENST00000562404 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
LPCAT4-202ENST00000562404 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
LPCAT4-202ENST00000562404 PHKG2P15735 406 aa15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 MPRIPQ6WCQ1 1025 aa15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 C5P01031 1676 aa15.12■□□□□ 0.01
LPCAT4-202ENST00000562404 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
LPCAT4-202ENST00000562404 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
LPCAT4-202ENST00000562404 COL3A1P02461 1466 aaPredicted RBP15.1■□□□□ 0.01
LPCAT4-202ENST00000562404 SLC27A3Q5K4L6 730 aa15.1■□□□□ 0.01
LPCAT4-202ENST00000562404 PIGBQ92521 554 aa15.1■□□□□ 0.01
LPCAT4-202ENST00000562404 KDRP35968 1356 aa15.1■□□□□ 0.01
LPCAT4-202ENST00000562404 PTGER2P43116 358 aa15.09■□□□□ 0.01
LPCAT4-202ENST00000562404 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
LPCAT4-202ENST00000562404 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
LPCAT4-202ENST00000562404 SPON1Q9HCB6 807 aa15.09■□□□□ 0.01
LPCAT4-202ENST00000562404 CCNL1Q9UK58 526 aaPredicted RBP15.08■□□□□ 0
LPCAT4-202ENST00000562404 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
LPCAT4-202ENST00000562404 COL24A1Q17RW2 1714 aa15.08■□□□□ 0
LPCAT4-202ENST00000562404 PALLDQ8WX93 1383 aa15.08■□□□□ 0
LPCAT4-202ENST00000562404 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0
LPCAT4-202ENST00000562404 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
LPCAT4-202ENST00000562404 PNPLA7Q6ZV29 1317 aa15.07■□□□□ 0
LPCAT4-202ENST00000562404 PLEKHG2Q9H7P9 1386 aa15.07■□□□□ 0
LPCAT4-202ENST00000562404 SGIP1Q9BQI5 828 aa15.06■□□□□ 0
LPCAT4-202ENST00000562404 C4BP0C0L5 1744 aa15.06■□□□□ 0
LPCAT4-202ENST00000562404 HMOX1P09601 288 aa15.05■□□□□ -0
LPCAT4-202ENST00000562404 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
LPCAT4-202ENST00000562404 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
LPCAT4-202ENST00000562404 ASAP1Q9ULH1 1129 aa15.05■□□□□ -0
LPCAT4-202ENST00000562404 UBR3Q6ZT12 1888 aa15.05■□□□□ -0
LPCAT4-202ENST00000562404 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
LPCAT4-202ENST00000562404 AMIGO3Q86WK7 504 aa15.03■□□□□ -0
LPCAT4-202ENST00000562404 MTFR1LQ9H019 292 aa15.03■□□□□ -0
LPCAT4-202ENST00000562404 ATG3Q9NT62 314 aa15.03■□□□□ -0
LPCAT4-202ENST00000562404 TMOD3Q9NYL9 352 aa15.03■□□□□ -0
LPCAT4-202ENST00000562404 AMOTQ4VCS5 1084 aa15.02■□□□□ -0
LPCAT4-202ENST00000562404 SMIM5Q71RC9 77 aa15.02■□□□□ -0
LPCAT4-202ENST00000562404 TFCP2L1Q9NZI6 479 aa15.02■□□□□ -0
LPCAT4-202ENST00000562404 ITPK1Q13572 414 aa15.01□□□□□ -0.01
LPCAT4-202ENST00000562404 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
LPCAT4-202ENST00000562404 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
LPCAT4-202ENST00000562404 SLC4A9Q96Q91 983 aa15.01□□□□□ -0.01
LPCAT4-202ENST00000562404 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
LPCAT4-202ENST00000562404 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
LPCAT4-202ENST00000562404 ADAMTS7Q9UKP4 1686 aa15□□□□□ -0.01
LPCAT4-202ENST00000562404 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
LPCAT4-202ENST00000562404 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
LPCAT4-202ENST00000562404 PPP2R1AP30153 589 aa15□□□□□ -0.01
LPCAT4-202ENST00000562404 SIK1P57059 783 aa15□□□□□ -0.01
LPCAT4-202ENST00000562404 COL23A1Q86Y22 540 aaPredicted RBP15□□□□□ -0.01
LPCAT4-202ENST00000562404 LINC00116Q8NCU8 138 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms