RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PIP4K2BP78356 416 aa18.55■□□□□ 0.56
COMMD4-205ENST00000562310 WDR17Q8IZU2 1322 aa18.54■□□□□ 0.56
COMMD4-205ENST00000562310 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-205ENST00000562310 ERICH6BQ5W0A0 696 aa18.54■□□□□ 0.56
COMMD4-205ENST00000562310 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
COMMD4-205ENST00000562310 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
COMMD4-205ENST00000562310 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
COMMD4-205ENST00000562310 OVOS2A0A0G2JMS6 1433 aa18.53■□□□□ 0.56
COMMD4-205ENST00000562310 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
COMMD4-205ENST00000562310 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
COMMD4-205ENST00000562310 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
COMMD4-205ENST00000562310 FKBP8Q14318 412 aa18.52■□□□□ 0.56
COMMD4-205ENST00000562310 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
COMMD4-205ENST00000562310 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
COMMD4-205ENST00000562310 CFAP44Q96MT7 982 aa18.51■□□□□ 0.55
COMMD4-205ENST00000562310 NWD2Q9ULI1 1742 aa18.51■□□□□ 0.55
COMMD4-205ENST00000562310 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
COMMD4-205ENST00000562310 CRB1P82279 1406 aa18.5■□□□□ 0.55
COMMD4-205ENST00000562310 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-205ENST00000562310 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
COMMD4-205ENST00000562310 MEGF6O75095 1541 aa18.49■□□□□ 0.55
COMMD4-205ENST00000562310 FAM83GA6ND36 823 aa18.49■□□□□ 0.55
COMMD4-205ENST00000562310 TATP17735 454 aaPredicted RBP18.49■□□□□ 0.55
COMMD4-205ENST00000562310 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
COMMD4-205ENST00000562310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.55
COMMD4-205ENST00000562310 JCADQ9P266 1359 aa18.49■□□□□ 0.55
COMMD4-205ENST00000562310 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
COMMD4-205ENST00000562310 AKAP4Q5JQC9 854 aa18.48■□□□□ 0.55
COMMD4-205ENST00000562310 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-205ENST00000562310 WNK3Q9BYP7 1800 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 TOM1L2Q6ZVM7 507 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 MCM10Q7L590 875 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
COMMD4-205ENST00000562310 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
COMMD4-205ENST00000562310 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
COMMD4-205ENST00000562310 EVA1CP58658 441 aa18.46■□□□□ 0.55
COMMD4-205ENST00000562310 EXOSC9Q06265 439 aaKnown RBP18.46■□□□□ 0.55
COMMD4-205ENST00000562310 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
COMMD4-205ENST00000562310 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
COMMD4-205ENST00000562310 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
COMMD4-205ENST00000562310 CHL1O00533 1208 aa18.45■□□□□ 0.54
COMMD4-205ENST00000562310 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
COMMD4-205ENST00000562310 SIPA1L3O60292 1781 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-205ENST00000562310 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
COMMD4-205ENST00000562310 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
COMMD4-205ENST00000562310 BTG4Q9NY30 223 aa18.43■□□□□ 0.54
COMMD4-205ENST00000562310 STRN4Q9NRL3 753 aa18.42■□□□□ 0.54
COMMD4-205ENST00000562310 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
COMMD4-205ENST00000562310 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-205ENST00000562310 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
COMMD4-205ENST00000562310 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
COMMD4-205ENST00000562310 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
COMMD4-205ENST00000562310 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
COMMD4-205ENST00000562310 MRC1P22897 1456 aa18.39■□□□□ 0.54
COMMD4-205ENST00000562310 SLIT2O94813 1529 aa18.39■□□□□ 0.54
COMMD4-205ENST00000562310 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
COMMD4-205ENST00000562310 IL2RBP14784 551 aa18.39■□□□□ 0.53
COMMD4-205ENST00000562310 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-205ENST00000562310 TSPYL4Q9UJ04 414 aa18.39■□□□□ 0.53
COMMD4-205ENST00000562310 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-205ENST00000562310 PCDH11XQ9BZA7 1347 aa18.39■□□□□ 0.53
COMMD4-205ENST00000562310 PCDH11YQ9BZA8 1340 aa18.39■□□□□ 0.53
COMMD4-205ENST00000562310 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
COMMD4-205ENST00000562310 PHKG2P15735 406 aa18.38■□□□□ 0.53
COMMD4-205ENST00000562310 HSPA1LP34931 641 aa18.38■□□□□ 0.53
COMMD4-205ENST00000562310 TEFQ10587 303 aa18.38■□□□□ 0.53
COMMD4-205ENST00000562310 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
COMMD4-205ENST00000562310 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.37■□□□□ 0.53
COMMD4-205ENST00000562310 BCAR3O75815 825 aa18.37■□□□□ 0.53
COMMD4-205ENST00000562310 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
COMMD4-205ENST00000562310 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
COMMD4-205ENST00000562310 TWISTNBQ3B726 338 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-205ENST00000562310 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
COMMD4-205ENST00000562310 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
COMMD4-205ENST00000562310 DISP2A7MBM2 1401 aa18.37■□□□□ 0.53
COMMD4-205ENST00000562310 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-205ENST00000562310 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-205ENST00000562310 BRPF1P55201 1214 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-205ENST00000562310 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
COMMD4-205ENST00000562310 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
COMMD4-205ENST00000562310 VAMP4O75379 141 aa18.35■□□□□ 0.53
COMMD4-205ENST00000562310 MS4A1P11836 297 aa18.35■□□□□ 0.53
COMMD4-205ENST00000562310 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
COMMD4-205ENST00000562310 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
COMMD4-205ENST00000562310 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
COMMD4-205ENST00000562310 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
COMMD4-205ENST00000562310 CACNA1FO60840 1977 aa18.34■□□□□ 0.53
COMMD4-205ENST00000562310 PLIN1O60240 522 aa18.34■□□□□ 0.53
COMMD4-205ENST00000562310 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
COMMD4-205ENST00000562310 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
COMMD4-205ENST00000562310 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
COMMD4-205ENST00000562310 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-205ENST00000562310 LGR6Q9HBX8 967 aa18.33■□□□□ 0.52
COMMD4-205ENST00000562310 THRAP3Q9Y2W1 955 aaKnown RBP18.33■□□□□ 0.52
COMMD4-205ENST00000562310 LRP6O75581 1613 aa18.32■□□□□ 0.52
COMMD4-205ENST00000562310 CYP27B1O15528 508 aa18.32■□□□□ 0.52
COMMD4-205ENST00000562310 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms