RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
CCP110-205ENST00000562083 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
CCP110-205ENST00000562083 NMRK2Q9NPI5 230 aa18.86■□□□□ 0.61
CCP110-205ENST00000562083 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
CCP110-205ENST00000562083 LTN1O94822 1766 aa18.83■□□□□ 0.61
CCP110-205ENST00000562083 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
CCP110-205ENST00000562083 SLC34A2O95436 690 aa18.83■□□□□ 0.6
CCP110-205ENST00000562083 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
CCP110-205ENST00000562083 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
CCP110-205ENST00000562083 SMIM5Q71RC9 77 aa18.82■□□□□ 0.6
CCP110-205ENST00000562083 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
CCP110-205ENST00000562083 ANKRD24Q8TF21 1146 aa18.82■□□□□ 0.6
CCP110-205ENST00000562083 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
CCP110-205ENST00000562083 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
CCP110-205ENST00000562083 C5P01031 1676 aa18.79■□□□□ 0.6
CCP110-205ENST00000562083 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
CCP110-205ENST00000562083 TAF1LQ8IZX4 1826 aa18.78■□□□□ 0.6
CCP110-205ENST00000562083 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
CCP110-205ENST00000562083 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
CCP110-205ENST00000562083 RBM46Q8TBY0 533 aaKnown RBP18.76■□□□□ 0.59
CCP110-205ENST00000562083 ZNF692Q9BU19 519 aaPredicted RBP18.75■□□□□ 0.59
CCP110-205ENST00000562083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
CCP110-205ENST00000562083 KIAA1551Q9HCM1 1747 aa18.74■□□□□ 0.59
CCP110-205ENST00000562083 NME9Q86XW9 330 aa18.73■□□□□ 0.59
CCP110-205ENST00000562083 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
CCP110-205ENST00000562083 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
CCP110-205ENST00000562083 USP47Q96K76 1375 aa18.72■□□□□ 0.59
CCP110-205ENST00000562083 RAB3GAP2Q9H2M9 1393 aa18.72■□□□□ 0.59
CCP110-205ENST00000562083 HSPA1AP0DMV8 641 aaKnown RBP18.72■□□□□ 0.59
CCP110-205ENST00000562083 HSPA1BP0DMV9 641 aaKnown RBP18.72■□□□□ 0.59
CCP110-205ENST00000562083 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
CCP110-205ENST00000562083 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
CCP110-205ENST00000562083 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
CCP110-205ENST00000562083 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
CCP110-205ENST00000562083 MON2Q7Z3U7 1717 aa18.71■□□□□ 0.59
CCP110-205ENST00000562083 FAM208AQ9UK61 1670 aaKnown RBP18.7■□□□□ 0.58
CCP110-205ENST00000562083 PHF14O94880 888 aa18.7■□□□□ 0.58
CCP110-205ENST00000562083 PXDNLA1KZ92 1463 aa18.7■□□□□ 0.58
CCP110-205ENST00000562083 C4BP0C0L5 1744 aa18.69■□□□□ 0.58
CCP110-205ENST00000562083 FLAD1Q8NFF5 587 aa18.69■□□□□ 0.58
CCP110-205ENST00000562083 EVC2Q86UK5 1308 aa18.69■□□□□ 0.58
CCP110-205ENST00000562083 MEGF6O75095 1541 aa18.69■□□□□ 0.58
CCP110-205ENST00000562083 FSTL1Q12841 308 aa18.68■□□□□ 0.58
CCP110-205ENST00000562083 ARHGAP27Q6ZUM4 889 aa18.68■□□□□ 0.58
CCP110-205ENST00000562083 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
CCP110-205ENST00000562083 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
CCP110-205ENST00000562083 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
CCP110-205ENST00000562083 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
CCP110-205ENST00000562083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.66■□□□□ 0.58
CCP110-205ENST00000562083 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
CCP110-205ENST00000562083 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
CCP110-205ENST00000562083 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
CCP110-205ENST00000562083 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
CCP110-205ENST00000562083 C9orf131Q5VYM1 1079 aa18.64■□□□□ 0.57
CCP110-205ENST00000562083 IP6K1Q92551 441 aa18.64■□□□□ 0.57
CCP110-205ENST00000562083 AK7Q96M32 723 aa18.64■□□□□ 0.57
CCP110-205ENST00000562083 RRAGCQ9HB90 399 aa18.63■□□□□ 0.57
CCP110-205ENST00000562083 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
CCP110-205ENST00000562083 PKD1L3Q7Z443 1732 aa18.63■□□□□ 0.57
CCP110-205ENST00000562083 BRCA1P38398 1863 aaKnown RBP18.62■□□□□ 0.57
CCP110-205ENST00000562083 MMP10P09238 476 aa18.6■□□□□ 0.57
CCP110-205ENST00000562083 FBLN1P23142 703 aa18.6■□□□□ 0.57
CCP110-205ENST00000562083 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
CCP110-205ENST00000562083 ITGB4P16144 1822 aa18.58■□□□□ 0.57
CCP110-205ENST00000562083 FCHSD2O94868 740 aa18.58■□□□□ 0.56
CCP110-205ENST00000562083 DPEP1P16444 411 aa18.58■□□□□ 0.56
CCP110-205ENST00000562083 USHBP1Q8N6Y0 703 aa18.58■□□□□ 0.56
CCP110-205ENST00000562083 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
CCP110-205ENST00000562083 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
CCP110-205ENST00000562083 SSFA2P28290 1259 aa18.56■□□□□ 0.56
CCP110-205ENST00000562083 TGFB2P61812 414 aa18.56■□□□□ 0.56
CCP110-205ENST00000562083 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
CCP110-205ENST00000562083 SBF1O95248 1867 aa18.56■□□□□ 0.56
CCP110-205ENST00000562083 C10orf71Q711Q0 1435 aa18.56■□□□□ 0.56
CCP110-205ENST00000562083 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
CCP110-205ENST00000562083 KCNA3P22001 575 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 HOXC9P31274 260 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
CCP110-205ENST00000562083 MAP3K19Q56UN5 1328 aa18.54■□□□□ 0.56
CCP110-205ENST00000562083 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
CCP110-205ENST00000562083 RNF181Q9P0P0 153 aa18.53■□□□□ 0.56
CCP110-205ENST00000562083 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
CCP110-205ENST00000562083 GNPATO15228 680 aa18.51■□□□□ 0.55
CCP110-205ENST00000562083 ITPK1Q13572 414 aa18.51■□□□□ 0.55
CCP110-205ENST00000562083 PIGBQ92521 554 aa18.51■□□□□ 0.55
CCP110-205ENST00000562083 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
CCP110-205ENST00000562083 CYP27B1O15528 508 aa18.5■□□□□ 0.55
CCP110-205ENST00000562083 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
CCP110-205ENST00000562083 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
CCP110-205ENST00000562083 FOXN1O15353 648 aa18.49■□□□□ 0.55
CCP110-205ENST00000562083 TMC1Q8TDI8 760 aa18.49■□□□□ 0.55
CCP110-205ENST00000562083 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
CCP110-205ENST00000562083 LOC102724428A0A0B4J2F2 783 aa18.48■□□□□ 0.55
CCP110-205ENST00000562083 AMPHP49418 695 aa18.48■□□□□ 0.55
CCP110-205ENST00000562083 SIK1P57059 783 aa18.48■□□□□ 0.55
CCP110-205ENST00000562083 DCAF5Q96JK2 942 aa18.48■□□□□ 0.55
CCP110-205ENST00000562083 PCDH10Q9P2E7 1040 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms