RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 GTF2IP78347 998 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
CNOT1-203ENST00000562046 FOXC1Q12948 553 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-203ENST00000562046 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 LARGE2Q8N3Y3 721 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 SIRT1Q96EB6 747 aa8.37□□□□□ -1.07
CNOT1-203ENST00000562046 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
CNOT1-203ENST00000562046 LILRA1O75019 489 aa8.36□□□□□ -1.07
CNOT1-203ENST00000562046 PDE4CQ08493 712 aa8.36□□□□□ -1.07
CNOT1-203ENST00000562046 FAM69CQ0P6D2 419 aa8.36□□□□□ -1.07
CNOT1-203ENST00000562046 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
CNOT1-203ENST00000562046 SIX5Q8N196 739 aa8.36□□□□□ -1.07
CNOT1-203ENST00000562046 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-203ENST00000562046 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
CNOT1-203ENST00000562046 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
CNOT1-203ENST00000562046 DPYDQ12882 1025 aa8.35□□□□□ -1.07
CNOT1-203ENST00000562046 CC2D2BQ6DHV5 1058 aa8.35□□□□□ -1.07
CNOT1-203ENST00000562046 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-203ENST00000562046 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-203ENST00000562046 OSBPL3Q9H4L5 887 aa8.35□□□□□ -1.07
CNOT1-203ENST00000562046 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
CNOT1-203ENST00000562046 J3QL48 77 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-203ENST00000562046 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
CNOT1-203ENST00000562046 PRR20EP86478 221 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 PRR20CP86479 221 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 PRR20DP86480 221 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 PRR20BP86481 221 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 PRR20AP86496 221 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 NNTQ13423 1086 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 CCDC102BQ68D86 513 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 SLAIN2Q9P270 581 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
CNOT1-203ENST00000562046 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
CNOT1-203ENST00000562046 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-203ENST00000562046 TPCN2Q8NHX9 752 aa8.32□□□□□ -1.08
CNOT1-203ENST00000562046 SMPD1P17405 629 aa8.31□□□□□ -1.08
CNOT1-203ENST00000562046 MYT1Q01538 1121 aa8.31□□□□□ -1.08
CNOT1-203ENST00000562046 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
CNOT1-203ENST00000562046 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 RGS20O76081 388 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 SCNN1DP51172 638 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 SEC13P55735 322 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 CYP4X1Q8N118 509 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
CNOT1-203ENST00000562046 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
CNOT1-203ENST00000562046 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-203ENST00000562046 WASLO00401 505 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-203ENST00000562046 BRD1O95696 1058 aa8.29□□□□□ -1.08
CNOT1-203ENST00000562046 STAU1O95793 577 aaKnown RBP8.29□□□□□ -1.08
CNOT1-203ENST00000562046 SWI5Q1ZZU3 235 aa8.29□□□□□ -1.08
CNOT1-203ENST00000562046 KCTD17Q8N5Z5 321 aa8.29□□□□□ -1.08
CNOT1-203ENST00000562046 KDF1Q8NAX2 398 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-203ENST00000562046 TRIM52Q96A61 297 aa8.29□□□□□ -1.08
CNOT1-203ENST00000562046 ITPKCQ96DU7 683 aa8.29□□□□□ -1.08
CNOT1-203ENST00000562046 M0R2N6 131 aa8.28□□□□□ -1.08
CNOT1-203ENST00000562046 PSME1Q06323 249 aa8.28□□□□□ -1.08
CNOT1-203ENST00000562046 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
CNOT1-203ENST00000562046 Q6ZVU0 165 aa8.28□□□□□ -1.08
CNOT1-203ENST00000562046 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT1-203ENST00000562046 TIMP2P16035 220 aa8.27□□□□□ -1.09
CNOT1-203ENST00000562046 CBLBQ13191 982 aa8.27□□□□□ -1.09
CNOT1-203ENST00000562046 CYP2U1Q7Z449 544 aa8.27□□□□□ -1.09
CNOT1-203ENST00000562046 ETNK1Q9HBU6 452 aa8.27□□□□□ -1.09
CNOT1-203ENST00000562046 ZNF358Q9NW07 568 aa8.27□□□□□ -1.09
CNOT1-203ENST00000562046 ZIC2O95409 532 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-203ENST00000562046 GNRH1P01148 92 aa8.26□□□□□ -1.09
CNOT1-203ENST00000562046 SSFA2P28290 1259 aa8.26□□□□□ -1.09
CNOT1-203ENST00000562046 HPS1Q92902 700 aa8.26□□□□□ -1.09
CNOT1-203ENST00000562046 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
CNOT1-203ENST00000562046 INHAP05111 366 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 ADH1AP07327 375 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 GDF10P55107 478 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
CNOT1-203ENST00000562046 OCLNQ16625 522 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 AEBP1Q8IUX7 1158 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
CNOT1-203ENST00000562046 ESF1Q9H501 851 aaKnown RBP8.25□□□□□ -1.09
CNOT1-203ENST00000562046 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
CNOT1-203ENST00000562046 EPHA4P54764 986 aa8.24□□□□□ -1.09
CNOT1-203ENST00000562046 TSEN2Q8NCE0 465 aaKnown RBP8.24□□□□□ -1.09
CNOT1-203ENST00000562046 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
CNOT1-203ENST00000562046 IL2RAP01589 272 aa8.23□□□□□ -1.09
CNOT1-203ENST00000562046 KCNA1Q09470 495 aa8.23□□□□□ -1.09
CNOT1-203ENST00000562046 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
CNOT1-203ENST00000562046 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
CNOT1-203ENST00000562046 WEE1P30291 646 aa8.22□□□□□ -1.09
CNOT1-203ENST00000562046 C1orf216Q8TAB5 229 aa8.22□□□□□ -1.09
CNOT1-203ENST00000562046 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
CNOT1-203ENST00000562046 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
CNOT1-203ENST00000562046 A0A1W2PRU2 124 aa8.21□□□□□ -1.1
CNOT1-203ENST00000562046 BACH1O14867 736 aa8.21□□□□□ -1.1
CNOT1-203ENST00000562046 LGR5O75473 907 aa8.21□□□□□ -1.1
CNOT1-203ENST00000562046 PTGIRP43119 386 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms