RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 FAM174AQ8TBP5 190 aa5.71□□□□□ -1.5
SPG11-225ENST00000561391 POGZQ7Z3K3 1410 aa5.71□□□□□ -1.5
SPG11-225ENST00000561391 ARID3CA6NKF2 412 aa5.7□□□□□ -1.5
SPG11-225ENST00000561391 PPFIA3O75145 1194 aa5.7□□□□□ -1.5
SPG11-225ENST00000561391 MPNDQ8N594 471 aa5.7□□□□□ -1.5
SPG11-225ENST00000561391 FAM217BQ9NTX9 383 aaPredicted RBP5.7□□□□□ -1.5
SPG11-225ENST00000561391 EVA1BQ9NVM1 165 aa5.7□□□□□ -1.5
SPG11-225ENST00000561391 ATP1B4Q9UN42 357 aaPredicted RBP5.7□□□□□ -1.5
SPG11-225ENST00000561391 UHRF1BP1Q6BDS2 1440 aa5.7□□□□□ -1.5
SPG11-225ENST00000561391 CTHP32929 405 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 PRR7Q8TB68 274 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 DDRGK1Q96HY6 314 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 ZFAND3Q9H8U3 227 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 PCDHGC3Q9UN70 934 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 PREX1Q8TCU6 1659 aa5.69□□□□□ -1.5
SPG11-225ENST00000561391 AGERQ15109 404 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 LINC00528Q8N1L1 170 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 ITPKCQ96DU7 683 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 CNTNAP3BQ96NU0 1288 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 BEGAINQ9BUH8 593 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 CNTNAP3Q9BZ76 1288 aa5.68□□□□□ -1.5
SPG11-225ENST00000561391 PHLDB1Q86UU1 1377 aa5.67□□□□□ -1.5
SPG11-225ENST00000561391 SVOPQ8N4V2 548 aa5.67□□□□□ -1.5
SPG11-225ENST00000561391 ADAMTS8Q9UP79 889 aa5.67□□□□□ -1.5
SPG11-225ENST00000561391 DNMT3AQ9Y6K1 912 aaPredicted RBP5.67□□□□□ -1.5
SPG11-225ENST00000561391 NR5A1Q13285 461 aa5.66□□□□□ -1.5
SPG11-225ENST00000561391 MTMR2Q13614 643 aa5.66□□□□□ -1.5
SPG11-225ENST00000561391 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
SPG11-225ENST00000561391 KLF16Q9BXK1 252 aaPredicted RBP5.66□□□□□ -1.5
SPG11-225ENST00000561391 GTF3C3Q9Y5Q9 886 aa5.66□□□□□ -1.5
SPG11-225ENST00000561391 FANCAO15360 1455 aa5.65□□□□□ -1.5
SPG11-225ENST00000561391 SPDYE5A6NIY4 337 aa5.65□□□□□ -1.5
SPG11-225ENST00000561391 NDUFV2P19404 249 aa5.65□□□□□ -1.5
SPG11-225ENST00000561391 DNMT3LQ9UJW3 386 aa5.65□□□□□ -1.5
SPG11-225ENST00000561391 FER1L4A9Z1Z3 1794 aa5.65□□□□□ -1.51
SPG11-225ENST00000561391 AKNAQ7Z591 1439 aa5.65□□□□□ -1.51
SPG11-225ENST00000561391 SETD1BQ9UPS6 1966 aaKnown RBP5.64□□□□□ -1.51
SPG11-225ENST00000561391 MOXD2PA6NHM9 499 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 SPTLC1O15269 473 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 ADAM23O75077 832 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 NR3C2P08235 984 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 DESI1Q6ICB0 168 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 MEIOBQ8N635 442 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 SPIRE2Q8WWL2 714 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 FOXJ1Q92949 421 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 CDK15Q96Q40 435 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 POLR3EQ9NVU0 708 aa5.64□□□□□ -1.51
SPG11-225ENST00000561391 SETD1AO15047 1707 aaKnown RBP5.64□□□□□ -1.51
SPG11-225ENST00000561391 TTC37Q6PGP7 1564 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 IRS1P35568 1242 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 FOXK2Q01167 660 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 KRT76Q01546 638 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.63□□□□□ -1.51
SPG11-225ENST00000561391 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 COL25A1Q9BXS0 654 aaPredicted RBP5.63□□□□□ -1.51
SPG11-225ENST00000561391 SOS2Q07890 1332 aaPredicted RBP5.63□□□□□ -1.51
SPG11-225ENST00000561391 NCOA1Q15788 1441 aa5.63□□□□□ -1.51
SPG11-225ENST00000561391 SIGLEC1Q9BZZ2 1709 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 SRCAPQ6ZRS2 3230 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 FSHRP23945 695 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 MARSP56192 900 aaKnown RBP5.62□□□□□ -1.51
SPG11-225ENST00000561391 BPHLQ86WA6 291 aaPredicted RBP5.62□□□□□ -1.51
SPG11-225ENST00000561391 GPR161Q8N6U8 529 aaKnown RBP5.62□□□□□ -1.51
SPG11-225ENST00000561391 TSEN34Q9BSV6 310 aaKnown RBP5.62□□□□□ -1.51
SPG11-225ENST00000561391 TBC1D2Q9BYX2 928 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 RSPH6AQ9H0K4 717 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 ESF1Q9H501 851 aaKnown RBP5.62□□□□□ -1.51
SPG11-225ENST00000561391 IGF1RP08069 1367 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 DISP1Q96F81 1524 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 FRMPD1Q5SYB0 1578 aa5.62□□□□□ -1.51
SPG11-225ENST00000561391 TTLL8A6PVC2 850 aa5.61□□□□□ -1.51
SPG11-225ENST00000561391 DENND4BO75064 1496 aaPredicted RBP5.61□□□□□ -1.51
SPG11-225ENST00000561391 ZNF385CQ66K41 422 aaPredicted RBP5.61□□□□□ -1.51
SPG11-225ENST00000561391 MAP10Q9P2G4 905 aa5.61□□□□□ -1.51
SPG11-225ENST00000561391 CAMSAP1Q5T5Y3 1602 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 ARHGEF40Q8TER5 1519 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 NEO1Q92859 1461 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 CDC14CA4D256 554 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 BTBD11A6QL63 1104 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 PTSQ03393 145 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 LYPD8Q6UX82 237 aa5.6□□□□□ -1.51
SPG11-225ENST00000561391 PCMTD1Q96MG8 357 aaPredicted RBP5.6□□□□□ -1.51
SPG11-225ENST00000561391 TRAPPC8Q9Y2L5 1435 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 FIGNL2A6NMB9 653 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 GRM5P41594 1212 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 SKIV2LQ15477 1246 aaKnown RBP5.59□□□□□ -1.51
SPG11-225ENST00000561391 CSPP1Q1MSJ5 1256 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 SH3D19Q5HYK7 790 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 MYSM1Q5VVJ2 828 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 KANK3Q6NY19 840 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
SPG11-225ENST00000561391 Q8N3U1 123 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 PROCA1Q8NCQ7 364 aaPredicted RBP5.59□□□□□ -1.51
SPG11-225ENST00000561391 EMILIN1Q9Y6C2 1016 aa5.59□□□□□ -1.51
SPG11-225ENST00000561391 ARHGEF12Q9NZN5 1544 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 PTPRKQ15262 1439 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 DIXDC1Q155Q3 683 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 C4orf48Q5BLP8 95 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 RNFT1Q5M7Z0 435 aa5.58□□□□□ -1.52
SPG11-225ENST00000561391 RIC3Q7Z5B4 369 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms