RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
HERC1-213ENST00000561359 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
HERC1-213ENST00000561359 NUP188Q5SRE5 1749 aa8.15□□□□□ -1.1
HERC1-213ENST00000561359 NEXMIFQ5QGS0 1516 aa8.15□□□□□ -1.1
HERC1-213ENST00000561359 STRN4Q9NRL3 753 aa8.15□□□□□ -1.1
HERC1-213ENST00000561359 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.11
HERC1-213ENST00000561359 RREB1Q92766 1687 aa8.14□□□□□ -1.11
HERC1-213ENST00000561359 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
HERC1-213ENST00000561359 CHD4Q14839 1912 aa8.14□□□□□ -1.11
HERC1-213ENST00000561359 LHX6Q9UPM6 363 aa8.14□□□□□ -1.11
HERC1-213ENST00000561359 RRBP1Q9P2E9 1410 aaKnown RBP8.13□□□□□ -1.11
HERC1-213ENST00000561359 NRAPQ86VF7 1730 aa8.13□□□□□ -1.11
HERC1-213ENST00000561359 HSPA6P17066 643 aa8.13□□□□□ -1.11
HERC1-213ENST00000561359 PLEKHH1Q9ULM0 1364 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 KIF1AQ12756 1690 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 EVA1CP58658 441 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 MFSD10Q14728 455 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 ZNF687Q8N1G0 1237 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 PMFBP1Q8TBY8 1022 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 OXER1Q8TDS5 423 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 ARXQ96QS3 562 aa8.12□□□□□ -1.11
HERC1-213ENST00000561359 MYOM1P52179 1685 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 RPGRIP1LQ68CZ1 1315 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 PLSCR1O15162 318 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 KRTAP3-3Q9BYR6 98 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 STK32BQ9NY57 414 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 COL14A1Q05707 1796 aaKnown RBP8.11□□□□□ -1.11
HERC1-213ENST00000561359 TECPR2O15040 1411 aa8.11□□□□□ -1.11
HERC1-213ENST00000561359 DLC1Q96QB1 1528 aa8.1□□□□□ -1.11
HERC1-213ENST00000561359 C11orf95C9JLR9 678 aaPredicted RBP8.1□□□□□ -1.11
HERC1-213ENST00000561359 MAP3K9P80192 1104 aa8.1□□□□□ -1.11
HERC1-213ENST00000561359 NRXN1Q9ULB1 1477 aa8.1□□□□□ -1.11
HERC1-213ENST00000561359 ABCA3Q99758 1704 aa8.09□□□□□ -1.11
HERC1-213ENST00000561359 TMEM132EQ6IEE7 984 aa8.09□□□□□ -1.11
HERC1-213ENST00000561359 TCP11L2Q8N4U5 519 aa8.09□□□□□ -1.11
HERC1-213ENST00000561359 GPRASP1Q5JY77 1395 aa8.09□□□□□ -1.12
HERC1-213ENST00000561359 KIAA0232Q92628 1395 aa8.09□□□□□ -1.12
HERC1-213ENST00000561359 ABCC11Q96J66 1382 aa8.09□□□□□ -1.12
HERC1-213ENST00000561359 ZC3H6P61129 1189 aaKnown RBP8.08□□□□□ -1.12
HERC1-213ENST00000561359 SLC15A2Q16348 729 aa8.08□□□□□ -1.12
HERC1-213ENST00000561359 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
HERC1-213ENST00000561359 CASZ1Q86V15 1759 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 CLTCL1P53675 1640 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 FMN2Q9NZ56 1722 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 SAFB2Q14151 953 aaKnown RBP eCLIP8.07□□□□□ -1.12
HERC1-213ENST00000561359 LARP1Q6PKG0 1096 aaKnown RBP8.07□□□□□ -1.12
HERC1-213ENST00000561359 SPNS2Q8IVW8 549 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 ROCK1Q13464 1354 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
HERC1-213ENST00000561359 ADGRF5Q8IZF2 1346 aa8.06□□□□□ -1.12
HERC1-213ENST00000561359 PPP4R3BQ5MIZ7 849 aa8.06□□□□□ -1.12
HERC1-213ENST00000561359 PTF1AQ7RTS3 328 aa8.06□□□□□ -1.12
HERC1-213ENST00000561359 ZNF526Q8TF50 670 aaPredicted RBP8.06□□□□□ -1.12
HERC1-213ENST00000561359 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
HERC1-213ENST00000561359 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 OVOS2A0A0J9YW53 1432 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 OVOS2Q6IE36 1432 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 SSH2Q76I76 1423 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 ATP10DQ9P241 1426 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 EVI5O60447 810 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 ITGAEP38570 1179 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 PRELPP51888 382 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 TXNRD1Q16881 649 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 COL13A1Q5TAT6 717 aaPredicted RBP8.05□□□□□ -1.12
HERC1-213ENST00000561359 ANKRD13DQ6ZTN6 518 aa8.05□□□□□ -1.12
HERC1-213ENST00000561359 NGDNQ8NEJ9 315 aaKnown RBP8.05□□□□□ -1.12
HERC1-213ENST00000561359 THRAP3Q9Y2W1 955 aaKnown RBP8.05□□□□□ -1.12
HERC1-213ENST00000561359 SHANK3Q9BYB0 1731 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 PBX2P40425 430 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 EMILIN3Q9NT22 766 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 AXIN2Q9Y2T1 843 aa8.04□□□□□ -1.12
HERC1-213ENST00000561359 KIF1BO60333 1816 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 POLD1P28340 1107 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 APLP1P51693 650 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 DDB1Q16531 1140 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 NUTM2GQ5VZR2 741 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 SIRT1Q96EB6 747 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 PRAM1Q96QH2 718 aa8.03□□□□□ -1.12
HERC1-213ENST00000561359 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
HERC1-213ENST00000561359 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.13
HERC1-213ENST00000561359 NLGN2Q8NFZ4 835 aa8.02□□□□□ -1.13
HERC1-213ENST00000561359 POGKQ9P215 609 aa8.02□□□□□ -1.13
HERC1-213ENST00000561359 ANKARQ7Z5J8 1434 aa8.02□□□□□ -1.13
HERC1-213ENST00000561359 DHX57Q6P158 1386 aaKnown RBP8.01□□□□□ -1.13
HERC1-213ENST00000561359 DPYSL4O14531 572 aa8.01□□□□□ -1.13
HERC1-213ENST00000561359 ARHGAP33O14559 1287 aa8.01□□□□□ -1.13
HERC1-213ENST00000561359 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERC1-213ENST00000561359 LSM11P83369 360 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERC1-213ENST00000561359 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
HERC1-213ENST00000561359 HIRIP3Q9BW71 556 aaPredicted RBP8.01□□□□□ -1.13
HERC1-213ENST00000561359 ALS2Q96Q42 1657 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms