RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	SH3RF1	Q7Z6J0	888 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	ARHGAP9	Q9BRR9	750 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	CARD14	Q9BXL6	1004 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	PRKD2	Q9BZL6	878 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	HECW2	Q9P2P5	1572 aa		11.41	□□□□□ -0.58
MARK3-223	ENST00000561071	NR1H3	Q13133	447 aa		11.41	□□□□□ -0.58
MARK3-223	ENST00000561071	WASHC4	Q2M389	1173 aa		11.41	□□□□□ -0.58
MARK3-223	ENST00000561071	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.41	□□□□□ -0.58
MARK3-223	ENST00000561071	HECW1	Q76N89	1606 aa		11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	SPRYD7	Q5W111	196 aa		11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	BPHL	Q86WA6	291 aa	Predicted RBP	11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	GPSM3	Q9Y4H4	160 aa		11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	PLCH2	O75038	1416 aa		11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	SCAPER	Q9BY12	1400 aa		11.4	□□□□□ -0.58
MARK3-223	ENST00000561071	WNT7B	P56706	349 aa		11.39	□□□□□ -0.59
MARK3-223	ENST00000561071	EFCAB2	Q5VUJ9	269 aa		11.39	□□□□□ -0.59
MARK3-223	ENST00000561071	RICTOR	Q6R327	1708 aa		11.39	□□□□□ -0.59
MARK3-223	ENST00000561071	ADAM32	Q8TC27	787 aa		11.39	□□□□□ -0.59
MARK3-223	ENST00000561071	YEATS2	Q9ULM3	1422 aa		11.39	□□□□□ -0.59
MARK3-223	ENST00000561071	KIF14	Q15058	1648 aa		11.38	□□□□□ -0.59
MARK3-223	ENST00000561071	PTPRM	P28827	1452 aa		11.38	□□□□□ -0.59
MARK3-223	ENST00000561071	MLEC	Q14165	292 aa		11.38	□□□□□ -0.59
MARK3-223	ENST00000561071	ZBTB33	Q86T24	672 aa		11.38	□□□□□ -0.59
MARK3-223	ENST00000561071	LRRIQ1	Q96JM4	1722 aa		11.38	□□□□□ -0.59
MARK3-223	ENST00000561071	ADAMTSL3	P82987	1691 aa		11.37	□□□□□ -0.59
MARK3-223	ENST00000561071	TRO	Q12816	1431 aa	Predicted RBP	11.37	□□□□□ -0.59
MARK3-223	ENST00000561071	RC3H1	Q5TC82	1133 aa	Known RBP	11.37	□□□□□ -0.59
MARK3-223	ENST00000561071	CFAP74	Q9C0B2	1584 aa		11.37	□□□□□ -0.59
MARK3-223	ENST00000561071	ERFE	Q4G0M1	354 aa		11.36	□□□□□ -0.59
MARK3-223	ENST00000561071	ZNF697	Q5TEC3	545 aa		11.36	□□□□□ -0.59
MARK3-223	ENST00000561071	AFAP1	Q8N556	730 aa		11.36	□□□□□ -0.59
MARK3-223	ENST00000561071	ADAMTS19	Q8TE59	1207 aa		11.36	□□□□□ -0.59
MARK3-223	ENST00000561071		V9GY48	417 aa	Predicted RBP	11.36	□□□□□ -0.59
MARK3-223	ENST00000561071	ARHGEF40	Q8TER5	1519 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	MADD	Q8WXG6	1647 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	BCORL1	Q5H9F3	1711 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	ZNF598	Q86UK7	904 aa	Known RBP	11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	EHBP1	Q8NDI1	1231 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	C1orf115	Q9H7X2	142 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	ZFYVE16	Q7Z3T8	1539 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	POGZ	Q7Z3K3	1410 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	CASKIN1	Q8WXD9	1431 aa		11.35	□□□□□ -0.59
MARK3-223	ENST00000561071	PCF11	O94913	1555 aa	Known RBP	11.34	□□□□□ -0.59
MARK3-223	ENST00000561071	C1QTNF2	Q9BXJ5	285 aa		11.34	□□□□□ -0.59
MARK3-223	ENST00000561071	SIGLEC1	Q9BZZ2	1709 aa		11.34	□□□□□ -0.59
MARK3-223	ENST00000561071	CLIP1	P30622	1438 aa		11.34	□□□□□ -0.59
MARK3-223	ENST00000561071	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.33	□□□□□ -0.6	1e-6	■□□□□ 9.8
MARK3-223	ENST00000561071	PCDHB9	Q9Y5E1	797 aa		11.33	□□□□□ -0.6
MARK3-223	ENST00000561071	ARHGAP5	Q13017	1502 aa		11.33	□□□□□ -0.6
MARK3-223	ENST00000561071	ZMYM4	Q5VZL5	1548 aa		11.33	□□□□□ -0.6
MARK3-223	ENST00000561071	MYO5C	Q9NQX4	1742 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	VARS	P26640	1264 aa	Known RBP	11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	FOXC1	Q12948	553 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	HDGFL1	Q5TGJ6	251 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	GLMN	Q92990	594 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	MRGPRX2	Q96LB1	330 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	ALG2	Q9H553	416 aa		11.32	□□□□□ -0.6
MARK3-223	ENST00000561071	RIMS1	Q86UR5	1692 aa	Known RBP	11.31	□□□□□ -0.6
MARK3-223	ENST00000561071	WNT7A	O00755	349 aa		11.31	□□□□□ -0.6
MARK3-223	ENST00000561071	MAGI2	Q86UL8	1455 aa		11.31	□□□□□ -0.6
MARK3-223	ENST00000561071	SEMA3F	Q13275	785 aa		11.3	□□□□□ -0.6
MARK3-223	ENST00000561071	DZIP3	Q86Y13	1208 aa	Known RBP	11.3	□□□□□ -0.6
MARK3-223	ENST00000561071	PKD2L1	Q9P0L9	805 aa		11.3	□□□□□ -0.6
MARK3-223	ENST00000561071	ATP10A	O60312	1499 aa		11.3	□□□□□ -0.6
MARK3-223	ENST00000561071	HSPA2	P54652	639 aa		11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	FAM174A	Q8TBP5	190 aa		11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	SLC10A4	Q96EP9	437 aa		11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	CALR3	Q96L12	384 aa	Known RBP	11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	TLL2	Q9Y6L7	1015 aa		11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	CCDC18	Q5T9S5	1454 aa		11.29	□□□□□ -0.6
MARK3-223	ENST00000561071	SIAH2	O43255	324 aa		11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	SOX11	P35716	441 aa		11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	CEBPA	P49715	358 aa	Predicted RBP	11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	TRMT44	Q8IYL2	757 aa	Known RBP	11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	CDC42BPB	Q9Y5S2	1711 aa		11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	ARHGEF12	Q9NZN5	1544 aa		11.28	□□□□□ -0.6
MARK3-223	ENST00000561071	TRAPPC8	Q9Y2L5	1435 aa		11.27	□□□□□ -0.6
MARK3-223	ENST00000561071	FYCO1	Q9BQS8	1478 aa		11.27	□□□□□ -0.6
MARK3-223	ENST00000561071	ARID5B	Q14865	1188 aa		11.27	□□□□□ -0.61
MARK3-223	ENST00000561071	C9orf84	Q5VXU9	1444 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	ZNF518A	Q6AHZ1	1483 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	LMTK3	Q96Q04	1460 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	TNFRSF10A	O00220	468 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	GDF9	O60383	454 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	TRIM67	Q6ZTA4	783 aa		11.26	□□□□□ -0.61
MARK3-223	ENST00000561071	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	2e-7	■■■■■ 29.2
MARK3-223	ENST00000561071	CEP126	Q9P2H0	1117 aa		11.25	□□□□□ -0.61
MARK3-223	ENST00000561071	PREX2	Q70Z35	1606 aa		11.24	□□□□□ -0.61
MARK3-223	ENST00000561071	LOC105371045	A0A1W2PR82	267 aa		11.24	□□□□□ -0.61
MARK3-223	ENST00000561071	VASH1	Q7L8A9	365 aa	Predicted RBP	11.24	□□□□□ -0.61
MARK3-223	ENST00000561071	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.24	□□□□□ -0.61
MARK3-223	ENST00000561071	KDM5C	P41229	1560 aa		11.24	□□□□□ -0.61
MARK3-223	ENST00000561071	GIGYF1	O75420	1035 aa	Predicted RBP	11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	RGS20	O76081	388 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	CCDC82	Q8N4S0	544 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	CDK15	Q96Q40	435 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	UCN2	Q96RP3	112 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	ABCC1	P33527	1531 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	DIP2C	Q9Y2E4	1556 aa		11.23	□□□□□ -0.61

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