RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 GNAT3A8MTJ3 354 aa28.99■■■□□ 2.23
PBX1-218ENST00000560469 CRB1P82279 1406 aa28.99■■■□□ 2.23
PBX1-218ENST00000560469 ALDH1L2Q3SY69 923 aa28.99■■■□□ 2.23
PBX1-218ENST00000560469 MAP3K5Q99683 1374 aa28.97■■■□□ 2.23
PBX1-218ENST00000560469 CHL1O00533 1208 aa28.97■■■□□ 2.23
PBX1-218ENST00000560469 FRAT1Q92837 279 aaPredicted RBP28.97■■■□□ 2.23
PBX1-218ENST00000560469 SMC4Q9NTJ3 1288 aa28.96■■■□□ 2.23
PBX1-218ENST00000560469 BCL2L13Q9BXK5 485 aa28.96■■■□□ 2.23
PBX1-218ENST00000560469 LMO7Q8WWI1 1683 aa28.95■■■□□ 2.23
PBX1-218ENST00000560469 SSH1Q8WYL5 1049 aa28.95■■■□□ 2.22
PBX1-218ENST00000560469 FAM208AQ9UK61 1670 aaKnown RBP28.95■■■□□ 2.22
PBX1-218ENST00000560469 LRRC37A3O60309 1634 aa28.94■■■□□ 2.22
PBX1-218ENST00000560469 AMOTQ4VCS5 1084 aa28.94■■■□□ 2.22
PBX1-218ENST00000560469 KIAA0232Q92628 1395 aa28.94■■■□□ 2.22
PBX1-218ENST00000560469 VAMP4O75379 141 aa28.93■■■□□ 2.22
PBX1-218ENST00000560469 PLEKHO1Q53GL0 409 aaPredicted RBP28.93■■■□□ 2.22
PBX1-218ENST00000560469 MS4A1P11836 297 aa28.93■■■□□ 2.22
PBX1-218ENST00000560469 ZKSCAN2Q63HK3 967 aa28.92■■■□□ 2.22
PBX1-218ENST00000560469 HAP1P54257 671 aaPredicted RBP28.91■■■□□ 2.22
PBX1-218ENST00000560469 BRPF1P55201 1214 aaPredicted RBP28.91■■■□□ 2.22
PBX1-218ENST00000560469 ABCA3Q99758 1704 aa28.91■■■□□ 2.22
PBX1-218ENST00000560469 KIF16BQ96L93 1317 aa28.9■■■□□ 2.22
PBX1-218ENST00000560469 TWISTNBQ3B726 338 aaPredicted RBP28.9■■■□□ 2.22
PBX1-218ENST00000560469 ROBO1Q9Y6N7 1651 aa28.89■■■□□ 2.22
PBX1-218ENST00000560469 CHRNA2Q15822 529 aa28.88■■■□□ 2.21
PBX1-218ENST00000560469 TSPYL6Q8N831 410 aa28.88■■■□□ 2.21
PBX1-218ENST00000560469 BABAM1Q9NWV8 329 aa28.88■■■□□ 2.21
PBX1-218ENST00000560469 IPO8O15397 1037 aaKnown RBP28.87■■■□□ 2.21
PBX1-218ENST00000560469 C8orf58Q8NAV2 365 aa28.87■■■□□ 2.21
PBX1-218ENST00000560469 AHDC1Q5TGY3 1603 aaPredicted RBP28.87■■■□□ 2.21
PBX1-218ENST00000560469 PLEKHG2Q9H7P9 1386 aa28.87■■■□□ 2.21
PBX1-218ENST00000560469 AKAP4Q5JQC9 854 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 PANK1Q8TE04 598 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 NLRP2Q9NX02 1062 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 CSB-PGBD3P0DP91 1061 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 AAMPQ13685 434 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 IL17REQ8NFR9 667 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 PRDM11Q9NQV5 511 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 TSPYL4Q9UJ04 414 aa28.86■■■□□ 2.21
PBX1-218ENST00000560469 ZNF530Q6P9A1 599 aaPredicted RBP28.84■■■□□ 2.21
PBX1-218ENST00000560469 DZIP1LQ8IYY4 767 aaKnown RBP28.83■■■□□ 2.21
PBX1-218ENST00000560469 CEMIPQ8WUJ3 1361 aa28.83■■■□□ 2.21
PBX1-218ENST00000560469 ELL2O00472 640 aaPredicted RBP28.83■■■□□ 2.21
PBX1-218ENST00000560469 ATF7IPQ6VMQ6 1270 aa28.83■■■□□ 2.21
PBX1-218ENST00000560469 RAPGEF4Q8WZA2 1011 aa28.83■■■□□ 2.21
PBX1-218ENST00000560469 NOB1Q9ULX3 412 aaKnown RBP28.83■■■□□ 2.21
PBX1-218ENST00000560469 COG6Q9Y2V7 657 aa28.83■■■□□ 2.21
PBX1-218ENST00000560469 FTSJ3Q8IY81 847 aaKnown RBP28.82■■■□□ 2.2
PBX1-218ENST00000560469 MRPL50Q8N5N7 158 aaKnown RBP28.82■■■□□ 2.2
PBX1-218ENST00000560469 TAF7Q15545 349 aaPredicted RBP28.81■■■□□ 2.2
PBX1-218ENST00000560469 C1orf141Q5JVX7 400 aa28.81■■■□□ 2.2
PBX1-218ENST00000560469 RLBP1P12271 317 aa28.8■■■□□ 2.2
PBX1-218ENST00000560469 TRIM27P14373 513 aa28.8■■■□□ 2.2
PBX1-218ENST00000560469 TATP17735 454 aaPredicted RBP28.8■■■□□ 2.2
PBX1-218ENST00000560469 OVOS2A0A0G2JMS6 1433 aa28.8■■■□□ 2.2
PBX1-218ENST00000560469 ARHGAP45Q92619 1136 aa28.79■■■□□ 2.2
PBX1-218ENST00000560469 TNNQ9UQP3 1299 aa28.79■■■□□ 2.2
PBX1-218ENST00000560469 CLUAP1Q96AJ1 413 aa28.78■■■□□ 2.2
PBX1-218ENST00000560469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.78■■■□□ 2.2
PBX1-218ENST00000560469 MIS18AQ9NYP9 233 aa28.78■■■□□ 2.2
PBX1-218ENST00000560469 MVPQ14764 893 aaKnown RBP28.77■■■□□ 2.2
PBX1-218ENST00000560469 WDR17Q8IZU2 1322 aa28.76■■■□□ 2.2
PBX1-218ENST00000560469 SOS1Q07889 1333 aaPredicted RBP28.76■■■□□ 2.19
PBX1-218ENST00000560469 COL22A1Q8NFW1 1626 aaPredicted RBP28.75■■■□□ 2.19
PBX1-218ENST00000560469 SPG7Q9UQ90 795 aa28.75■■■□□ 2.19
PBX1-218ENST00000560469 COL5A2P05997 1499 aaPredicted RBP28.75■■■□□ 2.19
PBX1-218ENST00000560469 KRT24Q2M2I5 525 aa28.74■■■□□ 2.19
PBX1-218ENST00000560469 LGR6Q9HBX8 967 aa28.74■■■□□ 2.19
PBX1-218ENST00000560469 RNMTO43148 476 aaKnown RBP28.73■■■□□ 2.19
PBX1-218ENST00000560469 MEGF6O75095 1541 aa28.73■■■□□ 2.19
PBX1-218ENST00000560469 TOM1O60784 492 aa28.72■■■□□ 2.19
PBX1-218ENST00000560469 TEFQ10587 303 aa28.72■■■□□ 2.19
PBX1-218ENST00000560469 ADAMTS7Q9UKP4 1686 aa28.71■■■□□ 2.19
PBX1-218ENST00000560469 VIRMAQ69YN4 1812 aaKnown RBP28.71■■■□□ 2.19
PBX1-218ENST00000560469 MPRIPQ6WCQ1 1025 aa28.7■■■□□ 2.19
PBX1-218ENST00000560469 CENPQQ7L2Z9 268 aaPredicted RBP28.7■■■□□ 2.19
PBX1-218ENST00000560469 DDX19BQ9UMR2 479 aa28.7■■■□□ 2.19
PBX1-218ENST00000560469 PKD1L3Q7Z443 1732 aa28.69■■■□□ 2.18
PBX1-218ENST00000560469 KDM2BQ8NHM5 1336 aa28.69■■■□□ 2.18
PBX1-218ENST00000560469 TOM1L2Q6ZVM7 507 aa28.69■■■□□ 2.18
PBX1-218ENST00000560469 API5Q9BZZ5 524 aaKnown RBP28.69■■■□□ 2.18
PBX1-218ENST00000560469 PHLPP1O60346 1717 aa28.68■■■□□ 2.18
PBX1-218ENST00000560469 KDM3BQ7LBC6 1761 aa28.68■■■□□ 2.18
PBX1-218ENST00000560469 TCERG1O14776 1098 aaKnown RBP28.67■■■□□ 2.18
PBX1-218ENST00000560469 PARP4Q9UKK3 1724 aaKnown RBP28.67■■■□□ 2.18
PBX1-218ENST00000560469 ITPRIPQ8IWB1 547 aa28.67■■■□□ 2.18
PBX1-218ENST00000560469 CARD10Q9BWT7 1032 aa28.67■■■□□ 2.18
PBX1-218ENST00000560469 IFNL2Q8IZJ0 200 aa28.66■■■□□ 2.18
PBX1-218ENST00000560469 TMEM57Q8N5G2 664 aa28.66■■■□□ 2.18
PBX1-218ENST00000560469 PHKG2P15735 406 aa28.65■■■□□ 2.18
PBX1-218ENST00000560469 EVA1CP58658 441 aa28.65■■■□□ 2.18
PBX1-218ENST00000560469 COL14A1Q05707 1796 aaKnown RBP28.65■■■□□ 2.18
PBX1-218ENST00000560469 COL16A1Q07092 1604 aaPredicted RBP28.65■■■□□ 2.18
PBX1-218ENST00000560469 BTBD11A6QL63 1104 aa28.64■■■□□ 2.17
PBX1-218ENST00000560469 CHMP4BQ9H444 224 aaKnown RBP28.64■■■□□ 2.17
PBX1-218ENST00000560469 ABCC4O15439 1325 aa28.63■■■□□ 2.17
PBX1-218ENST00000560469 PTPRCP08575 1304 aa28.63■■■□□ 2.17
PBX1-218ENST00000560469 SIPA1L3O60292 1781 aaPredicted RBP28.63■■■□□ 2.17
PBX1-218ENST00000560469 SCN11AQ9UI33 1791 aa28.62■■■□□ 2.17
PBX1-218ENST00000560469 CCDC30Q5VVM6 783 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms